| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076889
Identifier: 170076889
GI number: 170076889
Start: 274979
End: 275680
Strand: Direct
Name: 170076889
Synonym: SYNPCC7002_A0261
Alternate gene names: NA
Gene position: 274979-275680 (Clockwise)
Preceding gene: 170076884
Following gene: 170076891
Centisome position: 9.14
GC content: 54.27
Gene sequence:
>702_bases TTGCTGAACCATCCTCTTTTCTCTGTCGGTGCAGTGTATGTTCTCAAGCGACAACAGGATCTCCGCCGCAATATTCCCCT GCTAATTTGCCTCGCGTCGGGCTTCTTGGTTTCTGTGCCTGTTTTTTTCCAAGCCCCCCTGGTCAGGACAGCTCCCTGGC TGAGTTTGGCCTTGACTCTCCTCTGGGTAGCGATCGCCTGTGGCCTCCGGCAGCGAGAAAATACCGAAATTTGGGGTGAT CTCCTCTGGGGTTTTAGCTGGAGTTGGTTAGCCGGAGCCATCTATTGGGGCTGGTTGCGCTACGAACCCTTTTTACATCT TCCGGTGGAGGCAATTGGGCTACCCTTTGCCCTGTGGGGCCTGTGGCAAAAGCGGGGCTTGGTGGGACATTTGTTTTACC TGGGTTCCCTTCTTGGTACGGCGATCACCGACATTTACTTTTATCTCACGGATTTGATCCCCTACTGGCGCAAGCTCATG TATGCTGAGCCGGATTTTGTGATGCCTATTTTCCAGGCGGCCTTGGCCCAGATGCAGACCCTCTGGGGCATCAGTTGGGC GGTTGTTCTAGTGAATTTATTGATCGGCATTAGTTGGTGGGCCTTCCGTCAGCCCCAAATTCCCTACTGGAGTTTCGCCG GAGCCGTAGTCAGTACCCTCCTCGTCGATGGTCTGTTCTGGATTGCTGCCTGCTTCGCCTAG
Upstream 100 bases:
>100_bases AATCAGGCAAATTTCCCGTCCTCTTTATGAGAAAATCGGGAGTCATAAGTTAAAATTCATTAATAAATATTTACAAGTTA TTGTTACAAACCACTTTGTT
Downstream 100 bases:
>100_bases GAGATCCTGCTGCTTGATCATCTCTAACTGAAAAACTTCGCCAAAAATCTTCGGTAAATCTTCGCGCACCTGGGCTAAGG TAATATCCGGTAAAAACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MLNHPLFSVGAVYVLKRQQDLRRNIPLLICLASGFLVSVPVFFQAPLVRTAPWLSLALTLLWVAIACGLRQRENTEIWGD LLWGFSWSWLAGAIYWGWLRYEPFLHLPVEAIGLPFALWGLWQKRGLVGHLFYLGSLLGTAITDIYFYLTDLIPYWRKLM YAEPDFVMPIFQAALAQMQTLWGISWAVVLVNLLIGISWWAFRQPQIPYWSFAGAVVSTLLVDGLFWIAACFA
Sequences:
>Translated_233_residues MLNHPLFSVGAVYVLKRQQDLRRNIPLLICLASGFLVSVPVFFQAPLVRTAPWLSLALTLLWVAIACGLRQRENTEIWGD LLWGFSWSWLAGAIYWGWLRYEPFLHLPVEAIGLPFALWGLWQKRGLVGHLFYLGSLLGTAITDIYFYLTDLIPYWRKLM YAEPDFVMPIFQAALAQMQTLWGISWAVVLVNLLIGISWWAFRQPQIPYWSFAGAVVSTLLVDGLFWIAACFA >Mature_233_residues MLNHPLFSVGAVYVLKRQQDLRRNIPLLICLASGFLVSVPVFFQAPLVRTAPWLSLALTLLWVAIACGLRQRENTEIWGD LLWGFSWSWLAGAIYWGWLRYEPFLHLPVEAIGLPFALWGLWQKRGLVGHLFYLGSLLGTAITDIYFYLTDLIPYWRKLM YAEPDFVMPIFQAALAQMQTLWGISWAVVLVNLLIGISWWAFRQPQIPYWSFAGAVVSTLLVDGLFWIAACFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26669; Mature: 26669
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNHPLFSVGAVYVLKRQQDLRRNIPLLICLASGFLVSVPVFFQAPLVRTAPWLSLALTL CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH LWVAIACGLRQRENTEIWGDLLWGFSWSWLAGAIYWGWLRYEPFLHLPVEAIGLPFALWG HHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH LWQKRGLVGHLFYLGSLLGTAITDIYFYLTDLIPYWRKLMYAEPDFVMPIFQAALAQMQT HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LWGISWAVVLVNLLIGISWWAFRQPQIPYWSFAGAVVSTLLVDGLFWIAACFA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNHPLFSVGAVYVLKRQQDLRRNIPLLICLASGFLVSVPVFFQAPLVRTAPWLSLALTL CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH LWVAIACGLRQRENTEIWGDLLWGFSWSWLAGAIYWGWLRYEPFLHLPVEAIGLPFALWG HHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH LWQKRGLVGHLFYLGSLLGTAITDIYFYLTDLIPYWRKLMYAEPDFVMPIFQAALAQMQT HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LWGISWAVVLVNLLIGISWWAFRQPQIPYWSFAGAVVSTLLVDGLFWIAACFA HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA