| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076864
Identifier: 170076864
GI number: 170076864
Start: 241731
End: 243554
Strand: Direct
Name: 170076864
Synonym: SYNPCC7002_A0234
Alternate gene names: NA
Gene position: 241731-243554 (Clockwise)
Preceding gene: 170076863
Following gene: 170076865
Centisome position: 8.04
GC content: 51.75
Gene sequence:
>1824_bases ATGACTATGAAAAGACAGTTGCGGGATCTGAAAGTATGGGTGATGGTGGGTCTGTTGAGTTTAGGTGGAGCCTGGGGTCA AAGGGCGATCGCCGCTGAAACCCTCCGACTAAAATTAGGGCCACTTCAACAAACTTTACAATTAGAAGATTTAGAAACCT TTGCCGAAACGGGTCAAGTCCCCCGCAACCTCCGACCCTATGGGGTATTTTTGGATGGTAATTTGCAGAAATTTCTCCAA CGACGCTTGCAGATCGAGCCAGAGATGGCGGATCAGTTTTTTGATCAGTTGTGGCGATCGCCTACGGGAAAACAGATTTT GGCGCAAATTCAAACGGCCCTACCGGGAACTTCTATTCAGGATCTCCAGGCGACGGTGGATTTGGCGTTAGGTCAGGGAG TAGAAATCAGCGCCCTGAATTTGTTGCAGGCTTACCCCAAGCAGGAACTGACTATTGATCTTACGGCGGTGGCTGGCCTC TTGTTACAACTCAATTTACCGAATATCCAGAATCAACTCCTCGCGCCGAGGGTGACTGAAGCCCTCGAAAGTACAGAACC GCAGATTTTTCAACGCTCAAACCTCAACCCCACAGCCCCCGGCCCCCAAACGGTGCGGCGTCAAAGCTTAATTCTGCAAG ATGCAAAGCGCGATCGCACCATTCCCATTGATATTTTTGATAGTCCCCAATCCCAGTCTCAGCTAGTGGTTTTGTCCCAT GGGTTTGCGGCCAACCGTCATTTTCTCGATTATCTGGCGGTGCATCTGGCCTCCCATGGTTACACCGTCGTTACCCTCGA TCACCCCGGCAGTAATATTCAGTCTCTGTTTAATCCGGGCTTAAATCTTGATACTTTGCTCCCGGCGACGGAATTTGTCG ATCGGCCCAAGGATATTCAATTTGTGCTGGATCAACTGGAGCGCCTCAACCAGGATCAAACCCTCACAACCCGCTTTGCC ACGGACAATGTGACGGTAATTGGCCATTCCTTCGGAGGTTACACGGCCTTGGCGATCGCCGGAGGAATTGTCGATCCCAT TGCTATCCGTGCTCACTGCCAGCGGGCAACCCCTTTAACCAGAGCACCGGGGGACTGGCTCCAATGTGCAGCGGCGAAAC TCCCCTATGACCAGTTAAATTTGCGGGATGAACGGGTCAAACAGGCGATCGCCCTCAATCCCCTCAGCGATCAAATCTTT GGGGAGCAGGGTTTAGAAAAAATTAAAATTCCGACCTTGATCGTTGCTAGTACAAAGGATACCGTCACCCCAAGCTTGGC CCACCAGTTGAAACCGTTCCAGCAGTTGGGCGGCGAAAAATATCTCGTCGTCGCCGACGGTGCAACCCACATGAGCGTCA CTGATGTTAGCAATCGCGATAGCGCCTTGGCCCAAAGTACCCTTGTCCCGGAGGTGATGGGCAACGCGGCAGAACCAGTC CGACAAATGGTACGAGGGGTAAGCTTAAGCTTTCTGGCGCGCCACCAAACCGGAGGACAAAATTACCAGCAATTTCTCAC GGGGGCCTATGTGCAATCTCTTTCCCAGGGGGCGATTAAGCTACGCCTCACGGAAACGATTTCTCCAGAGTTAGAACGAT TCCTGAGTCGCTTACCCCAGGCTCCCAATTCTGCCGAAGTGGCGACACCGACTCAACAGGCTGCTTTTTTGAATATGGGG CGATCGCCAAACCCAACCCCCAACCGCACCTATCCCCAGGGCGTTCTCACGGAAAGCCTTAAGCCCTTGATGACGAACTT GGAATCGGAAACTTTTCTCGCAATAAAGCCGGATAATTTTGATGTCTTGTATCAAAAACCCTGA
Upstream 100 bases:
>100_bases GAGACACCACCTGCTCTAATTGAGGGGTGGTTTTGTTTTAGGAACTTCTGGGGCAATAGGGAGTCCAAAAAAGTTTGGGG ATAATCGTCAACGGTGCAGT
Downstream 100 bases:
>100_bases AGAATTTCAGAGAAACGGTAAGATGAAAAAGTTCAATTTTCAGGCCATTTAAATAACAATGTCTCAGGCACCTCTGTTAT CGAAATTTGGGACGCAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTMKRQLRDLKVWVMVGLLSLGGAWGQRAIAAETLRLKLGPLQQTLQLEDLETFAETGQVPRNLRPYGVFLDGNLQKFLQ RRLQIEPEMADQFFDQLWRSPTGKQILAQIQTALPGTSIQDLQATVDLALGQGVEISALNLLQAYPKQELTIDLTAVAGL LLQLNLPNIQNQLLAPRVTEALESTEPQIFQRSNLNPTAPGPQTVRRQSLILQDAKRDRTIPIDIFDSPQSQSQLVVLSH GFAANRHFLDYLAVHLASHGYTVVTLDHPGSNIQSLFNPGLNLDTLLPATEFVDRPKDIQFVLDQLERLNQDQTLTTRFA TDNVTVIGHSFGGYTALAIAGGIVDPIAIRAHCQRATPLTRAPGDWLQCAAAKLPYDQLNLRDERVKQAIALNPLSDQIF GEQGLEKIKIPTLIVASTKDTVTPSLAHQLKPFQQLGGEKYLVVADGATHMSVTDVSNRDSALAQSTLVPEVMGNAAEPV RQMVRGVSLSFLARHQTGGQNYQQFLTGAYVQSLSQGAIKLRLTETISPELERFLSRLPQAPNSAEVATPTQQAAFLNMG RSPNPTPNRTYPQGVLTESLKPLMTNLESETFLAIKPDNFDVLYQKP
Sequences:
>Translated_607_residues MTMKRQLRDLKVWVMVGLLSLGGAWGQRAIAAETLRLKLGPLQQTLQLEDLETFAETGQVPRNLRPYGVFLDGNLQKFLQ RRLQIEPEMADQFFDQLWRSPTGKQILAQIQTALPGTSIQDLQATVDLALGQGVEISALNLLQAYPKQELTIDLTAVAGL LLQLNLPNIQNQLLAPRVTEALESTEPQIFQRSNLNPTAPGPQTVRRQSLILQDAKRDRTIPIDIFDSPQSQSQLVVLSH GFAANRHFLDYLAVHLASHGYTVVTLDHPGSNIQSLFNPGLNLDTLLPATEFVDRPKDIQFVLDQLERLNQDQTLTTRFA TDNVTVIGHSFGGYTALAIAGGIVDPIAIRAHCQRATPLTRAPGDWLQCAAAKLPYDQLNLRDERVKQAIALNPLSDQIF GEQGLEKIKIPTLIVASTKDTVTPSLAHQLKPFQQLGGEKYLVVADGATHMSVTDVSNRDSALAQSTLVPEVMGNAAEPV RQMVRGVSLSFLARHQTGGQNYQQFLTGAYVQSLSQGAIKLRLTETISPELERFLSRLPQAPNSAEVATPTQQAAFLNMG RSPNPTPNRTYPQGVLTESLKPLMTNLESETFLAIKPDNFDVLYQKP >Mature_606_residues TMKRQLRDLKVWVMVGLLSLGGAWGQRAIAAETLRLKLGPLQQTLQLEDLETFAETGQVPRNLRPYGVFLDGNLQKFLQR RLQIEPEMADQFFDQLWRSPTGKQILAQIQTALPGTSIQDLQATVDLALGQGVEISALNLLQAYPKQELTIDLTAVAGLL LQLNLPNIQNQLLAPRVTEALESTEPQIFQRSNLNPTAPGPQTVRRQSLILQDAKRDRTIPIDIFDSPQSQSQLVVLSHG FAANRHFLDYLAVHLASHGYTVVTLDHPGSNIQSLFNPGLNLDTLLPATEFVDRPKDIQFVLDQLERLNQDQTLTTRFAT DNVTVIGHSFGGYTALAIAGGIVDPIAIRAHCQRATPLTRAPGDWLQCAAAKLPYDQLNLRDERVKQAIALNPLSDQIFG EQGLEKIKIPTLIVASTKDTVTPSLAHQLKPFQQLGGEKYLVVADGATHMSVTDVSNRDSALAQSTLVPEVMGNAAEPVR QMVRGVSLSFLARHQTGGQNYQQFLTGAYVQSLSQGAIKLRLTETISPELERFLSRLPQAPNSAEVATPTQQAAFLNMGR SPNPTPNRTYPQGVLTESLKPLMTNLESETFLAIKPDNFDVLYQKP
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66894; Mature: 66763
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKRQLRDLKVWVMVGLLSLGGAWGQRAIAAETLRLKLGPLQQTLQLEDLETFAETGQV CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCC PRNLRPYGVFLDGNLQKFLQRRLQIEPEMADQFFDQLWRSPTGKQILAQIQTALPGTSIQ CCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH DLQATVDLALGQGVEISALNLLQAYPKQELTIDLTAVAGLLLQLNLPNIQNQLLAPRVTE HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHEECCCCHHHHHHHHHHHH ALESTEPQIFQRSNLNPTAPGPQTVRRQSLILQDAKRDRTIPIDIFDSPQSQSQLVVLSH HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC GFAANRHFLDYLAVHLASHGYTVVTLDHPGSNIQSLFNPGLNLDTLLPATEFVDRPKDIQ CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHCCHHHHHCCCCHHH FVLDQLERLNQDQTLTTRFATDNVTVIGHSFGGYTALAIAGGIVDPIAIRAHCQRATPLT HHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCC RAPGDWLQCAAAKLPYDQLNLRDERVKQAIALNPLSDQIFGEQGLEKIKIPTLIVASTKD CCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHHHCHHCCCCCCCCEEEEECCCC TVTPSLAHQLKPFQQLGGEKYLVVADGATHMSVTDVSNRDSALAQSTLVPEVMGNAAEPV CCCHHHHHHCCHHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHH RQMVRGVSLSFLARHQTGGQNYQQFLTGAYVQSLSQGAIKLRLTETISPELERFLSRLPQ HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCC APNSAEVATPTQQAAFLNMGRSPNPTPNRTYPQGVLTESLKPLMTNLESETFLAIKPDNF CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC DVLYQKP EEEEECC >Mature Secondary Structure TMKRQLRDLKVWVMVGLLSLGGAWGQRAIAAETLRLKLGPLQQTLQLEDLETFAETGQV CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCC PRNLRPYGVFLDGNLQKFLQRRLQIEPEMADQFFDQLWRSPTGKQILAQIQTALPGTSIQ CCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH DLQATVDLALGQGVEISALNLLQAYPKQELTIDLTAVAGLLLQLNLPNIQNQLLAPRVTE HHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHEECCCCHHHHHHHHHHHH ALESTEPQIFQRSNLNPTAPGPQTVRRQSLILQDAKRDRTIPIDIFDSPQSQSQLVVLSH HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEC GFAANRHFLDYLAVHLASHGYTVVTLDHPGSNIQSLFNPGLNLDTLLPATEFVDRPKDIQ CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHCCHHHHHCCCCHHH FVLDQLERLNQDQTLTTRFATDNVTVIGHSFGGYTALAIAGGIVDPIAIRAHCQRATPLT HHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCC RAPGDWLQCAAAKLPYDQLNLRDERVKQAIALNPLSDQIFGEQGLEKIKIPTLIVASTKD CCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCHHHHHCHHCCCCCCCCEEEEECCCC TVTPSLAHQLKPFQQLGGEKYLVVADGATHMSVTDVSNRDSALAQSTLVPEVMGNAAEPV CCCHHHHHHCCHHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHH RQMVRGVSLSFLARHQTGGQNYQQFLTGAYVQSLSQGAIKLRLTETISPELERFLSRLPQ HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCC APNSAEVATPTQQAAFLNMGRSPNPTPNRTYPQGVLTESLKPLMTNLESETFLAIKPDNF CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC DVLYQKP EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA