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The map label for this gene is prc [H]

Identifier: 170076844

GI number: 170076844

Start: 222176

End: 223498

Strand: Direct

Name: prc [H]

Synonym: SYNPCC7002_A0213

Alternate gene names: 170076844

Gene position: 222176-223498 (Clockwise)

Preceding gene: 170076843

Following gene: 170076845

Centisome position: 7.39

GC content: 51.85

Gene sequence:

>1323_bases
ATGTCAAACTCTAAACCCTTTGTACTCGGTGCAACAGCTCTAGTGTTAACCACTGTGGCGGTTACAGGGGCAGGGCTGCA
CTACTCTAAAAGTCAAGCCTACCTCAAAGACAGCCCAAAGGAAATTGTGGACGAGGTTTGGTATGTCATCAACAAAGAAT
ATGTTGATGCGACCTTTAACCAAAATGACTGGCGTCAGGTGCGGCAAGAGTTTCTCAGCAAAGACTATGCCAATACGGAC
GAAGCCTACGATGCAATTCGGGAAATGTTAGATCTCCTGGGAGATCCTTACACCCGGTTTATGCCCCCCCAAGATTTTGA
AAATTTACAGGTTGATACGTCCGGTGAGTTGACCGGGGTCGGCATTCAGATCGCCAAGGATAAAGATACAGAAGAGGTGG
TCGTGATTGCGCCCATTGAGGAGACGCCAGCCTTTGAAGCGGGCATTATGGCCCAAGATGTGATCGTTGCTGTGGATGAG
CAACCCACCGAAGGGATGGAACTCAACGATGTGGTGAATTTGATCCGGGGCCAACGGGGTACGGAGGTCACCCTCACCAT
CCGCCGAGATGAGCGAGTATTAGAATTTCCCATTGTCCGGGAAGTGATTCAGATTCATCCGGTAAAGGCACGGATTAATG
AGAGTCCCATTGGGGATGTGGGCTATATTCGCTTGACCCAATTTAGCGCCCAGGCAACGGCAGAGATGCGCGAGGCGATC
GCCGATCTAGAATCTCAAAATGTCGATGGCTATGTTTTAGATCTACGTTCTAATCCTGGGGGACTGCTCTATGCCAGCAT
TGACATTGCCCAAATGTGGCTTGATGGTGGTGGGATTGTTTCGACGGTAAACCGTGTCGGGGAAGTGGATCGCCAGGAGG
CCAGTGACCGCGCCCTAACAGATAAACCCCTGATCGTTTTAGTGGACGGGGGATCCGCCAGTGCCAGCGAAATCCTTTCC
GGCGCGCTCCAGGACAATCAACGGGCGGTACTTGTAGGGACGCAAACCTTCGGTAAGGGCCTAGTCCAATCTGTCCGTCG
CCTAGGGGATGATTCTGGGGTTGCCGTGACGGTCGCCAAATATTTGACCCCCTCTGGTCGGGATATCAATAAAGAAGGCA
TTGCGCCGGACTTTATTGTGGAACTTGATGAAGCTGATCAAGAAACATTGCAAGAAGATCGCACAAAAATTGGTACAATG
GCTGACCCGCAATATGCCAAGGCGATCCAACTGCTCGACGAACAACTCCGCACTGGGACGATTGTGATCCCCGAAAAACA
GGCCAGCACTGAGCGACCGAGCCGCCCCGCCCAGGATAGCTAA

Upstream 100 bases:

>100_bases
CTTCCCGATTTTAAGTTTGCTGCATTAGCATAGGTATAGTGGCTGTCGTGCAAATTATTGATGGGGGCAGTCCCAATTTA
CTAATTATCTGAAGCCTTCC

Downstream 100 bases:

>100_bases
ACTCCCAAGTCCTCGGTGTCAGCGATCGCCCTTTAAAAGGCCGTTACAAATCTTGTTGCGGTGGCGATCGCCCCCGGATC
CCAGGCTCAACTCCCCTGGA

Product: carboxyl-terminal protease (periplasmic)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSNSKPFVLGATALVLTTVAVTGAGLHYSKSQAYLKDSPKEIVDEVWYVINKEYVDATFNQNDWRQVRQEFLSKDYANTD
EAYDAIREMLDLLGDPYTRFMPPQDFENLQVDTSGELTGVGIQIAKDKDTEEVVVIAPIEETPAFEAGIMAQDVIVAVDE
QPTEGMELNDVVNLIRGQRGTEVTLTIRRDERVLEFPIVREVIQIHPVKARINESPIGDVGYIRLTQFSAQATAEMREAI
ADLESQNVDGYVLDLRSNPGGLLYASIDIAQMWLDGGGIVSTVNRVGEVDRQEASDRALTDKPLIVLVDGGSASASEILS
GALQDNQRAVLVGTQTFGKGLVQSVRRLGDDSGVAVTVAKYLTPSGRDINKEGIAPDFIVELDEADQETLQEDRTKIGTM
ADPQYAKAIQLLDEQLRTGTIVIPEKQASTERPSRPAQDS

Sequences:

>Translated_440_residues
MSNSKPFVLGATALVLTTVAVTGAGLHYSKSQAYLKDSPKEIVDEVWYVINKEYVDATFNQNDWRQVRQEFLSKDYANTD
EAYDAIREMLDLLGDPYTRFMPPQDFENLQVDTSGELTGVGIQIAKDKDTEEVVVIAPIEETPAFEAGIMAQDVIVAVDE
QPTEGMELNDVVNLIRGQRGTEVTLTIRRDERVLEFPIVREVIQIHPVKARINESPIGDVGYIRLTQFSAQATAEMREAI
ADLESQNVDGYVLDLRSNPGGLLYASIDIAQMWLDGGGIVSTVNRVGEVDRQEASDRALTDKPLIVLVDGGSASASEILS
GALQDNQRAVLVGTQTFGKGLVQSVRRLGDDSGVAVTVAKYLTPSGRDINKEGIAPDFIVELDEADQETLQEDRTKIGTM
ADPQYAKAIQLLDEQLRTGTIVIPEKQASTERPSRPAQDS
>Mature_439_residues
SNSKPFVLGATALVLTTVAVTGAGLHYSKSQAYLKDSPKEIVDEVWYVINKEYVDATFNQNDWRQVRQEFLSKDYANTDE
AYDAIREMLDLLGDPYTRFMPPQDFENLQVDTSGELTGVGIQIAKDKDTEEVVVIAPIEETPAFEAGIMAQDVIVAVDEQ
PTEGMELNDVVNLIRGQRGTEVTLTIRRDERVLEFPIVREVIQIHPVKARINESPIGDVGYIRLTQFSAQATAEMREAIA
DLESQNVDGYVLDLRSNPGGLLYASIDIAQMWLDGGGIVSTVNRVGEVDRQEASDRALTDKPLIVLVDGGSASASEILSG
ALQDNQRAVLVGTQTFGKGLVQSVRRLGDDSGVAVTVAKYLTPSGRDINKEGIAPDFIVELDEADQETLQEDRTKIGTMA
DPQYAKAIQLLDEQLRTGTIVIPEKQASTERPSRPAQDS

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=321, Percent_Identity=30.8411214953271, Blast_Score=129, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48262; Mature: 48130

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSKPFVLGATALVLTTVAVTGAGLHYSKSQAYLKDSPKEIVDEVWYVINKEYVDATFN
CCCCCCEEEEHHHHHHHHHHHHCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCC
QNDWRQVRQEFLSKDYANTDEAYDAIREMLDLLGDPYTRFMPPQDFENLQVDTSGELTGV
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCEEEE
GIQIAKDKDTEEVVVIAPIEETPAFEAGIMAQDVIVAVDEQPTEGMELNDVVNLIRGQRG
EEEEECCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCC
TEVTLTIRRDERVLEFPIVREVIQIHPVKARINESPIGDVGYIRLTQFSAQATAEMREAI
CEEEEEEECCCCCHHHHHHHHHHHHCCHHEECCCCCCCCCCEEEEEECCHHHHHHHHHHH
ADLESQNVDGYVLDLRSNPGGLLYASIDIAQMWLDGGGIVSTVNRVGEVDRQEASDRALT
HHHHCCCCCEEEEEEECCCCCEEEEEEEEEEEHCCCCCHHHHHHHHHHHHHHHCCCCCCC
DKPLIVLVDGGSASASEILSGALQDNQRAVLVGTQTFGKGLVQSVRRLGDDSGVAVTVAK
CCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEE
YLTPSGRDINKEGIAPDFIVELDEADQETLQEDRTKIGTMADPQYAKAIQLLDEQLRTGT
HHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCE
IVIPEKQASTERPSRPAQDS
EEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNSKPFVLGATALVLTTVAVTGAGLHYSKSQAYLKDSPKEIVDEVWYVINKEYVDATFN
CCCCCEEEEHHHHHHHHHHHHCCCCEECCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCC
QNDWRQVRQEFLSKDYANTDEAYDAIREMLDLLGDPYTRFMPPQDFENLQVDTSGELTGV
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCEEEE
GIQIAKDKDTEEVVVIAPIEETPAFEAGIMAQDVIVAVDEQPTEGMELNDVVNLIRGQRG
EEEEECCCCCCCEEEEEECCCCCCCHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCC
TEVTLTIRRDERVLEFPIVREVIQIHPVKARINESPIGDVGYIRLTQFSAQATAEMREAI
CEEEEEEECCCCCHHHHHHHHHHHHCCHHEECCCCCCCCCCEEEEEECCHHHHHHHHHHH
ADLESQNVDGYVLDLRSNPGGLLYASIDIAQMWLDGGGIVSTVNRVGEVDRQEASDRALT
HHHHCCCCCEEEEEEECCCCCEEEEEEEEEEEHCCCCCHHHHHHHHHHHHHHHCCCCCCC
DKPLIVLVDGGSASASEILSGALQDNQRAVLVGTQTFGKGLVQSVRRLGDDSGVAVTVAK
CCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEEEEEEE
YLTPSGRDINKEGIAPDFIVELDEADQETLQEDRTKIGTMADPQYAKAIQLLDEQLRTGT
HHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCE
IVIPEKQASTERPSRPAQDS
EEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]