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The map label for this gene is hypC [H]

Identifier: 170076836

GI number: 170076836

Start: 215936

End: 216175

Strand: Direct

Name: hypC [H]

Synonym: SYNPCC7002_A0205

Alternate gene names: 170076836

Gene position: 215936-216175 (Clockwise)

Preceding gene: 170076835

Following gene: 170076837

Centisome position: 7.18

GC content: 53.75

Gene sequence:

>240_bases
ATGTGCCTTGCTGTGCCGGGAAAAATTTTAGAAATTGTGGGGGATGACCCCCTTTTTAAAATGGGTCGCGTTAGTTTTAG
CGGTGTGGTGCGGGAGGTGAGCCTCGCCTATGTGCCGGAAGCCCAAGTGGGGGATTATGCAGTGGTTCACGCGGGGTTTG
CCCTGAGTGTTTTGGATGAAGTGGCGGCAACAGAAACCCTTGCCACTTTGGCAGAAATGGAGTCCTTTGCGGGGGGATAG

Upstream 100 bases:

>100_bases
TCAACAAAAAGCTTAATAAAAAAACTTAAAACTAATAACATCAAAGCAAAAAATTCGTTAGGATAAACAGTAGCCAATCC
AATCAAAATATTCCAAAAAT

Downstream 100 bases:

>100_bases
TGAATGAAATTTGTAGATGAATTTCGCGATCCCGCAGCGGTTCAGAAATATGTGCAGGCGATCGCCGCCCTTGTGACCCG
TCCATGGACAATCATGGAGA

Product: hydrogenase assembly chaperone HypC/HupF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MCLAVPGKILEIVGDDPLFKMGRVSFSGVVREVSLAYVPEAQVGDYAVVHAGFALSVLDEVAATETLATLAEMESFAGG

Sequences:

>Translated_79_residues
MCLAVPGKILEIVGDDPLFKMGRVSFSGVVREVSLAYVPEAQVGDYAVVHAGFALSVLDEVAATETLATLAEMESFAGG
>Mature_79_residues
MCLAVPGKILEIVGDDPLFKMGRVSFSGVVREVSLAYVPEAQVGDYAVVHAGFALSVLDEVAATETLATLAEMESFAGG

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8218; Mature: 8218

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLAVPGKILEIVGDDPLFKMGRVSFSGVVREVSLAYVPEAQVGDYAVVHAGFALSVLDE
CCCCCCCHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEHHHCHHHHHHHH
VAATETLATLAEMESFAGG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCLAVPGKILEIVGDDPLFKMGRVSFSGVVREVSLAYVPEAQVGDYAVVHAGFALSVLDE
CCCCCCCHHHHCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEHHHCHHHHHHHH
VAATETLATLAEMESFAGG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]