Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170076820

Identifier: 170076820

GI number: 170076820

Start: 197858

End: 199324

Strand: Direct

Name: 170076820

Synonym: SYNPCC7002_A0189

Alternate gene names: NA

Gene position: 197858-199324 (Clockwise)

Preceding gene: 170076819

Following gene: 170076821

Centisome position: 6.58

GC content: 54.19

Gene sequence:

>1467_bases
GTGGCTTCTTCAGTTTTGGATATTTTTCGCCTCAAACGCTTCGATCAAGTCGTCCTCGCTGCCCTTTTTAGCCTTACGTT
AGCGGTGGCACTGCTGTGGGGATTTGGCGATCGCACCCTCACCCAAGTGCAGGCTTTCAGTTGGGAGGGGCAACAAATTG
GGGTAGCAGACCAAAAATTTCAACTGTCCTTTAACCAGGCCCTCGATCCAGCCATCGTCACGGAAAATTTCACCATTGAA
CCACCCCTGGCAGGCCGTTGGAGTTGGGTCGGCAAAACATTTTTCTATAGCCTTGATGAACGCCCCATCTACGGCCAGGA
TTATCAATTCAAACTAGCTGCTCCTACCCCAGAAGCGGCAGAGAAGCCCAATATCGTGCCTTTCTTGAGTCGGGTAAAAA
GTCGAGACCGGGCCTTTGCTTACATTGGCACCGACGGCACTGACCGGGGCCGCTTGATTTTGTATAACCTGACTCGCCAG
GAAAAAAGTGTCCTCACCCCAGCCGACCTCATCGTTCTCAATTTGGATGTGTATCCTGAAGGCGATCGCCTATTATTTTC
TGCCATTCCCCGGGGATCGGCCCAGGCTGAGATTGGCGACCAACAACTCTATACCGTGAGCACAGGCTTAAATTTCCAAG
GCTCTACCGACAGCCCCCCACCTGCCGGGCGCATTCAGTCTGTCTTAACAGCCAAAGACTATCGCAATGGGGCCTTTCAA
CTTGCGGACAATGGAGAACGGATCATTATTCAGCGCACAAATCGAGAGAATCCCCGCGATCGCAGTTTGTGGGTCATCGA
AGGCCAAGCCGAGCCCCGCGCCCTAGGGATTCCCGCCGATGACTTCCTCCTCGCCCCCAATGCCGAAGTTGTTGCCATTT
CCCAACAAAATAAACTCTCCCTCGTGCCCCTGAACCGCAACGGTGGTGCCATCCAAGCCAAGGAAGAATTTACGAAGCTC
CTCGCCTTTTCCCCCGACCAAACCCAACAAATCGCCCTCCAGCAGGCCAATGGCGTTTACTCTCTCCACCGCATCGACGC
CCAGGGAGAAGCCACAGAAATTTTACGCACCCTCACGCCGATTATTGATTGTCGCTTTGAACCCCGCGCGGCGGAACTTT
TGTATTGCCTCAAGCTGGATCGAAATGAAACCTCAGGCCAAGTGGTTGAGGAACCTTTTCTCAGTGCCTTGAATCTCAAA
ACAGGGGAAGAAACCGCCCTCCTCGCTTTACCGAATTACCGGGATGTGGGCCTGAGCATTGCTGCCGATGGGGTTGCCCT
CCTCTTCGATCAGGTGGTCACGACTCCACCAACGCCCACCAGCGATCTGTTTACTTCCACGGGCCTGGCGGTGGAAGGGG
GCCGACTCTGGCTATTGGCGCTCCCGGAGTTGGAGACAGATACAGAAATTCAGCCTGTTCCACCGGAATCTCTGCTGCCG
GGCTATCAACCCCAGTGGATTCCTTAA

Upstream 100 bases:

>100_bases
GATGCTTTTATTGAAGCTTCCCTGCGCCAGGACACCTGGGTGGGAGACTAGCACCGGGGAATGGGGAACGGTGAGCTAAA
ATGCAAGGTGGCAAAATTTC

Downstream 100 bases:

>100_bases
CGATTTTTTTGCTGCACTTTCCTTTTTTAATGGGAGCAATTAGCCCCCGTAGATCCTATGACCGTTTTGAAAACCATGAC
CCGCATTGATCGTCTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MASSVLDIFRLKRFDQVVLAALFSLTLAVALLWGFGDRTLTQVQAFSWEGQQIGVADQKFQLSFNQALDPAIVTENFTIE
PPLAGRWSWVGKTFFYSLDERPIYGQDYQFKLAAPTPEAAEKPNIVPFLSRVKSRDRAFAYIGTDGTDRGRLILYNLTRQ
EKSVLTPADLIVLNLDVYPEGDRLLFSAIPRGSAQAEIGDQQLYTVSTGLNFQGSTDSPPPAGRIQSVLTAKDYRNGAFQ
LADNGERIIIQRTNRENPRDRSLWVIEGQAEPRALGIPADDFLLAPNAEVVAISQQNKLSLVPLNRNGGAIQAKEEFTKL
LAFSPDQTQQIALQQANGVYSLHRIDAQGEATEILRTLTPIIDCRFEPRAAELLYCLKLDRNETSGQVVEEPFLSALNLK
TGEETALLALPNYRDVGLSIAADGVALLFDQVVTTPPTPTSDLFTSTGLAVEGGRLWLLALPELETDTEIQPVPPESLLP
GYQPQWIP

Sequences:

>Translated_488_residues
MASSVLDIFRLKRFDQVVLAALFSLTLAVALLWGFGDRTLTQVQAFSWEGQQIGVADQKFQLSFNQALDPAIVTENFTIE
PPLAGRWSWVGKTFFYSLDERPIYGQDYQFKLAAPTPEAAEKPNIVPFLSRVKSRDRAFAYIGTDGTDRGRLILYNLTRQ
EKSVLTPADLIVLNLDVYPEGDRLLFSAIPRGSAQAEIGDQQLYTVSTGLNFQGSTDSPPPAGRIQSVLTAKDYRNGAFQ
LADNGERIIIQRTNRENPRDRSLWVIEGQAEPRALGIPADDFLLAPNAEVVAISQQNKLSLVPLNRNGGAIQAKEEFTKL
LAFSPDQTQQIALQQANGVYSLHRIDAQGEATEILRTLTPIIDCRFEPRAAELLYCLKLDRNETSGQVVEEPFLSALNLK
TGEETALLALPNYRDVGLSIAADGVALLFDQVVTTPPTPTSDLFTSTGLAVEGGRLWLLALPELETDTEIQPVPPESLLP
GYQPQWIP
>Mature_487_residues
ASSVLDIFRLKRFDQVVLAALFSLTLAVALLWGFGDRTLTQVQAFSWEGQQIGVADQKFQLSFNQALDPAIVTENFTIEP
PLAGRWSWVGKTFFYSLDERPIYGQDYQFKLAAPTPEAAEKPNIVPFLSRVKSRDRAFAYIGTDGTDRGRLILYNLTRQE
KSVLTPADLIVLNLDVYPEGDRLLFSAIPRGSAQAEIGDQQLYTVSTGLNFQGSTDSPPPAGRIQSVLTAKDYRNGAFQL
ADNGERIIIQRTNRENPRDRSLWVIEGQAEPRALGIPADDFLLAPNAEVVAISQQNKLSLVPLNRNGGAIQAKEEFTKLL
AFSPDQTQQIALQQANGVYSLHRIDAQGEATEILRTLTPIIDCRFEPRAAELLYCLKLDRNETSGQVVEEPFLSALNLKT
GEETALLALPNYRDVGLSIAADGVALLFDQVVTTPPTPTSDLFTSTGLAVEGGRLWLLALPELETDTEIQPVPPESLLPG
YQPQWIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53844; Mature: 53712

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSVLDIFRLKRFDQVVLAALFSLTLAVALLWGFGDRTLTQVQAFSWEGQQIGVADQKF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCEECCCCCEE
QLSFNQALDPAIVTENFTIEPPLAGRWSWVGKTFFYSLDERPIYGQDYQFKLAAPTPEAA
EEECCCCCCCEEEECCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC
EKPNIVPFLSRVKSRDRAFAYIGTDGTDRGRLILYNLTRQEKSVLTPADLIVLNLDVYPE
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCC
GDRLLFSAIPRGSAQAEIGDQQLYTVSTGLNFQGSTDSPPPAGRIQSVLTAKDYRNGAFQ
CCEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCEEE
LADNGERIIIQRTNRENPRDRSLWVIEGQAEPRALGIPADDFLLAPNAEVVAISQQNKLS
EECCCCEEEEECCCCCCCCCCEEEEEECCCCCCEECCCCCCEEECCCCCEEEEECCCCEE
LVPLNRNGGAIQAKEEFTKLLAFSPDQTQQIALQQANGVYSLHRIDAQGEATEILRTLTP
EEEECCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
IIDCRFEPRAAELLYCLKLDRNETSGQVVEEPFLSALNLKTGEETALLALPNYRDVGLSI
HHCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEE
AADGVALLFDQVVTTPPTPTSDLFTSTGLAVEGGRLWLLALPELETDTEIQPVPPESLLP
ECCCHHHHHHHHHCCCCCCCHHHHHCCCCEEECCEEEEEECCCCCCCCCCCCCCCHHHCC
GYQPQWIP
CCCCCCCC
>Mature Secondary Structure 
ASSVLDIFRLKRFDQVVLAALFSLTLAVALLWGFGDRTLTQVQAFSWEGQQIGVADQKF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCEECCCCCEE
QLSFNQALDPAIVTENFTIEPPLAGRWSWVGKTFFYSLDERPIYGQDYQFKLAAPTPEAA
EEECCCCCCCEEEECCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCC
EKPNIVPFLSRVKSRDRAFAYIGTDGTDRGRLILYNLTRQEKSVLTPADLIVLNLDVYPE
CCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCC
GDRLLFSAIPRGSAQAEIGDQQLYTVSTGLNFQGSTDSPPPAGRIQSVLTAKDYRNGAFQ
CCEEEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCEEE
LADNGERIIIQRTNRENPRDRSLWVIEGQAEPRALGIPADDFLLAPNAEVVAISQQNKLS
EECCCCEEEEECCCCCCCCCCEEEEEECCCCCCEECCCCCCEEECCCCCEEEEECCCCEE
LVPLNRNGGAIQAKEEFTKLLAFSPDQTQQIALQQANGVYSLHRIDAQGEATEILRTLTP
EEEECCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH
IIDCRFEPRAAELLYCLKLDRNETSGQVVEEPFLSALNLKTGEETALLALPNYRDVGLSI
HHCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEE
AADGVALLFDQVVTTPPTPTSDLFTSTGLAVEGGRLWLLALPELETDTEIQPVPPESLLP
ECCCHHHHHHHHHCCCCCCCHHHHHCCCCEEECCEEEEEECCCCCCCCCCCCCCCHHHCC
GYQPQWIP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA