| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is bcp [H]
Identifier: 170076742
GI number: 170076742
Start: 109795
End: 110373
Strand: Direct
Name: bcp [H]
Synonym: SYNPCC7002_A0109
Alternate gene names: 170076742
Gene position: 109795-110373 (Clockwise)
Preceding gene: 170076739
Following gene: 170076743
Centisome position: 3.65
GC content: 52.33
Gene sequence:
>579_bases ATGTTGCAATTTTTTCGGACGATTCTCATTACTGTGGTGGCGATCGCCTTTATGTGGTTCCCCGGTGAGGCGGCGATCGC CCTGGGTGGCCCCCAGCCCGAACTCAACCAACTCGCCCCAGAATTCACCCTTTTGGGCAATGACGGCGAGGGGAAGATTC AAGAATTTTCTCTCCAAGACTACCGAGGCCAATGGGTCGTACTCTACTTTTATCCCCAGGATTTCACCCCTGGCTGTACC CTCGAAGCCCGCCGTTTCCAACAGGATCTTCCCAAATACCTGGAGCGTAATGTACAAGTCCTGGGGGTCAGCGTTGACGA TGTCGATTCCCACGAAGCGTTCTGTGATGCCGAAGGCTTAAAGTTTCCCCTCCTGGCCGATAGCACCGGGGATGTGAGTA AACAATATGGCTCCTACCTGACGGGCTATTCCCTACGCCATACCTACCTCATTGATCCAGAAGGTATTTTGCGCAAAATT TATCTAGGGGTAAATCCCGCGATCCATAGCCAAGAAGTCCTTACAGACCTTGATTCTCTGATGGCAAATTCCTCAGCCCA GCTTCCCCCGATGGGTTAA
Upstream 100 bases:
>100_bases GCCGATGATGCCAATTTTGATGTCTGCCATGGTGACTCGCTGTTAGATTTGCCTTGATTTGCTACAACATTATCTTGTAT CAAAACCTGCTTTAAATTCC
Downstream 100 bases:
>100_bases AATCGACAACGATTGTAAAGTTTGTCCACACCGTTGTTTTAAAAGAAGATTCCTCCATGATTCACGATATTTTCATGCCC GCCCTCAGCTCTACGATGAC
Product: AhpC/TSA family protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLQFFRTILITVVAIAFMWFPGEAAIALGGPQPELNQLAPEFTLLGNDGEGKIQEFSLQDYRGQWVVLYFYPQDFTPGCT LEARRFQQDLPKYLERNVQVLGVSVDDVDSHEAFCDAEGLKFPLLADSTGDVSKQYGSYLTGYSLRHTYLIDPEGILRKI YLGVNPAIHSQEVLTDLDSLMANSSAQLPPMG
Sequences:
>Translated_192_residues MLQFFRTILITVVAIAFMWFPGEAAIALGGPQPELNQLAPEFTLLGNDGEGKIQEFSLQDYRGQWVVLYFYPQDFTPGCT LEARRFQQDLPKYLERNVQVLGVSVDDVDSHEAFCDAEGLKFPLLADSTGDVSKQYGSYLTGYSLRHTYLIDPEGILRKI YLGVNPAIHSQEVLTDLDSLMANSSAQLPPMG >Mature_192_residues MLQFFRTILITVVAIAFMWFPGEAAIALGGPQPELNQLAPEFTLLGNDGEGKIQEFSLQDYRGQWVVLYFYPQDFTPGCT LEARRFQQDLPKYLERNVQVLGVSVDDVDSHEAFCDAEGLKFPLLADSTGDVSKQYGSYLTGYSLRHTYLIDPEGILRKI YLGVNPAIHSQEVLTDLDSLMANSSAQLPPMG
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5453549, Length=130, Percent_Identity=37.6923076923077, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI5802974, Length=144, Percent_Identity=34.7222222222222, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI32189392, Length=152, Percent_Identity=35.5263157894737, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI32483377, Length=125, Percent_Identity=34.4, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4505591, Length=146, Percent_Identity=31.5068493150685, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI32455266, Length=146, Percent_Identity=31.5068493150685, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI32455264, Length=146, Percent_Identity=31.5068493150685, Blast_Score=76, Evalue=2e-14, Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=32.1917808219178, Blast_Score=80, Evalue=7e-17, Organism=Caenorhabditis elegans, GI32565831, Length=130, Percent_Identity=33.8461538461538, Blast_Score=70, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193204376, Length=130, Percent_Identity=33.8461538461538, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319407, Length=176, Percent_Identity=30.6818181818182, Blast_Score=76, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323613, Length=123, Percent_Identity=35.7723577235772, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320661, Length=123, Percent_Identity=34.9593495934959, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI17738015, Length=145, Percent_Identity=39.3103448275862, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24656348, Length=139, Percent_Identity=38.1294964028777, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI17864676, Length=139, Percent_Identity=38.1294964028777, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI21357347, Length=136, Percent_Identity=34.5588235294118, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17157991, Length=151, Percent_Identity=32.4503311258278, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641739, Length=151, Percent_Identity=32.4503311258278, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24652434, Length=165, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24652436, Length=165, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17975518, Length=165, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 21415; Mature: 21415
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQFFRTILITVVAIAFMWFPGEAAIALGGPQPELNQLAPEFTLLGNDGEGKIQEFSLQD CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCEEEECCCCCCCEEEEEHHC YRGQWVVLYFYPQDFTPGCTLEARRFQQDLPKYLERNVQVLGVSVDDVDSHEAFCDAEGL CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHEECCCCC KFPLLADSTGDVSKQYGSYLTGYSLRHTYLIDPEGILRKIYLGVNPAIHSQEVLTDLDSL EEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHH MANSSAQLPPMG HCCCCCCCCCCC >Mature Secondary Structure MLQFFRTILITVVAIAFMWFPGEAAIALGGPQPELNQLAPEFTLLGNDGEGKIQEFSLQD CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCEEEECCCCCCCEEEEEHHC YRGQWVVLYFYPQDFTPGCTLEARRFQQDLPKYLERNVQVLGVSVDDVDSHEAFCDAEGL CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHEECCCCC KFPLLADSTGDVSKQYGSYLTGYSLRHTYLIDPEGILRKIYLGVNPAIHSQEVLTDLDSL EEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHH MANSSAQLPPMG HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]