| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026047
Identifier: 170026047
GI number: 170026047
Start: 4226250
End: 4228805
Strand: Reverse
Name: 170026047
Synonym: YPK_3834
Alternate gene names: NA
Gene position: 4228805-4226250 (Counterclockwise)
Preceding gene: 170026048
Following gene: 170026045
Centisome position: 90.18
GC content: 34.27
Gene sequence:
>2556_bases ATGAGACAAGTAACGAAATCAAAGAAAATTAAAATCTTGCCATACCCAGAATGGTTAGTTAAGGCCGGGATGTCAAAAGG TATAGATCATGATAGGCAACATTTAGGCATTATTCTTGCTGCAGGTGAAATGATTAAAGTCAGACAAGTCAATGCTGAAT ATAAGGAAAAACTTAAATTATATTTACTCAATGATAATAAAAATACTCAACGATCGATAAGTTTTAATACTGATTGGATA GAGCTGAGTGTCGATGCTGTTTCAGTACCCTTTATTAATACCCCATATAGTGATGGGATTATTCCTGAGATTATTTTTGA GTATCCGGATACTTCTAAATTACTGCCAGTTTATGAAAAAGGAGAGGATGAGAGCATCTTCTTTGAAAGTTGGGATAAAC AGAATGCCGAGTTTGGCGTGGTAGAATCAGAATATGTAATAATTCTGATCCCGGAAGTTAGTAAGGACAGGCTAAAATCT TTCAGTACGAGTGGCGGTATTGATACAGTTTTGGGGTTTTATCAAGATATTTTTTCTTTCAATAATTCTCTGGCTGGCTT GTCTTTTGAACCGCAAAGATATTCTGACGGAAACACACGAAATCGTTACTTTGCTAAAGCAGATAAAGGGGGCGGTGGGG CAGCATATTATTCTAATAATTGGATTGCCTCATCCTCTGGTTCTATAAATACATTTTGGCTTTCTCCCAATGCTACTAAC TGGGGCTGCCTACATGAAATTGCGCATGGTTATCAGGGCGGGTTTATTGATGATAAATATTTTTCCACAAGAGAAGTATG GAATAATATTTATGCTGCCTGCTACCAAGATGTTATGTTAGGTGCTGAAAAGTTTAATAAAGGGTGGCTATATAATTTCG GTAAGCAAAAAGAGGTTGAAAAAAGTATTTTAAATAACATTAATAATGGTAAAGAAGTAAATGCTTGGGGGGAACGTAGC AAATTATATTTTATCATGCTGATGCTGGAAAAAGCGGGGGTAAATTGTTTTACTCATTTCAACCAGATATATCGTGAGCG TAAAAATACTGATCAAAGCGTAGGCTCGGTGTTAGATATGCTCTCAAATAGTTTCGCAACTGTTGAAAATCGAGTTGATG TTACACCATTTTTACAAATGGTTGGGGGACATATATCTAAAAATCAATATCAACGTAACTTATTTAGCCATGCAAAGGCG GTATATCCATTAAATCAACTCTTGCAAGGTGATGAACTCACTGCTGTTAAGAAAACGCTAGATTTGAATAGTGAACTCAG TCTTGTTGATGTGGATAGTATTGAATTTACAGATATAAAAAGTAATTTGACATTGCAATTTTCTATAGATGATTTCGCTC AGATATATGGCGAAGAATTGCTTATACTGAATGGTGACAACTATGTGTATAATCAATCTATTATGGATAAAAAACAAACT TTATATAATCTCCCCGTTGGTGCTTATACATTGCGAATTCCAACAGGAAGAAATAAAAAATATGCACCACAAATTAATTA TCTGATAGTGAAAAATGAAGATAGCCAAACACAAGTTGATTTTGTCCACAGAATAGGATCTCCAATTGTTTCACAAAAAA TTTCTTTGCAGGGACTAAATGATTATACATTTGCAACTATATTTTTTGATCAAGAAAATGATACTGTCAGCGTTGATATT ACTAAGACTAAACCACATTATCATTTCCCTGGCATGTATGCGAGAATAAGAATAAAAGACAAAGATAATAATGAGCTACT CAATGAAGTTATTACAGGAACTAATCAATCGCTGAGTAAAAATGATTTTCCACTATCTTCTTGTTATGTTATTGATATCT TTCACAAAGAGCCTGGTAGGGTAAAGCTAACTCCGGCATATAAAGGTGTGATTGATAATAAATCCAGTTACAATGAATTT ATTATCACGCCTTATGGTTTGCAAAACATCAAATTGAATAATGATCCAAAGGTTTTTTTATTGGAAAATATAAAATCGGC AGCAGAAACGCTGCGTAGTCACCCTATAATGTGGCATGCGAATTTTTCAGAAGCTAAAGATAATATATATTTGGCAATCG ATATCTTTCCTAGCCCACAAAAGGAAGGTTTACTAGAGCAATATGCTGATTGTATTTCTTCCTACTATGAAAAGCCAAAT GAAGACTTGGGTAATGCATTTAGTTTTATCTTTAAAGGAATTAATGACCGAGAATTTTTGACAGCTAAGCTTAATTTAGT GACAAAAAAACTTGAAGTTAAAATTGTAAGTGGTACTCCACATAGTGGATTCAAAAGGACTTACGCTGTACTACGTTATT TTAATGCTGATGGAAATGAACTCCTTAATCTGGATATTATTGGTAGTAAAAAACAGGCTGGACAAGAGTGGGTATTCCCT ATATCAGGTTATGGTGGAGAAAAACTCTATCTTCAACATGTGGAACCTAAAAATAGATTAGTGATTACCAATATTATGCA AGGAATCAGATTATCATCGCGCACAAGTATACAAACCTATGAAATAGAATCTTTGGGGTTGAGTCGTTGCACCTGA
Upstream 100 bases:
>100_bases TAGATATATTTCAAAATAATTTTTTATATGTAAATATCACTAATGAATTACATTGGGGCTTTAATCTATAAGTTATGTAA TTTTAGTGAGGGTTATATTT
Downstream 100 bases:
>100_bases CCCTAAGCGACATTTCTCATCGCACAAGCCACAACCGTCGATATGGCAGATTTACGTTGGCCTTAATGGGGAGCTGCGAT GAGTTTCATTGTGTTTAAAT
Product: peptidase M60 viral enhancin protein
Products: NA
Alternate protein names: Fibronectin Type III Domain-Containing Protein; Enhancing Factor; Surface Associated Protein With Similarity Proteases; Viral Enhancin Protein; Metallprotease Enhancin Family
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISFNTDWI ELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKS FSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNAWGERS KLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKA VYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDTVSVDI TKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEF IITPYGLQNIKLNNDPKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQEWVFP ISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT
Sequences:
>Translated_851_residues MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISFNTDWI ELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKS FSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNAWGERS KLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKA VYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDTVSVDI TKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEF IITPYGLQNIKLNNDPKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQEWVFP ISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT >Mature_851_residues MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKLYLLNDNKNTQRSISFNTDWI ELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEKGEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKS FSTSGGIDTVLGFYQDIFSFNNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVEKSILNNINNGKEVNAWGERS KLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDMLSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKA VYPLNQLLQGDELTAVKKTLDLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLNDYTFATIFFDQENDTVSVDI TKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSKNDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEF IITPYGLQNIKLNNDPKVFLLENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNELLNLDIIGSKKQAGQEWVFP ISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTYEIESLGLSRCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96859; Mature: 96859
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKL CCCCCCCCCEEEEECHHHHHHCCHHCCCCCCCHHEEEEEECCCEEEEEECCHHHCCCEEE YLLNDNKNTQRSISFNTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEK EEEECCCCCCEEEEECCCEEEEEEEEEEECEECCCCCCCCCHHHEECCCCCCCCCCCEEC GEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKSFSTSGGIDTVLGFYQDIFSF CCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHH NNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN CCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEECCCCEEEEEECCCCCC WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVE CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH KSILNNINNGKEVNAWGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDM HHHHHCCCCCCEECCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKAVYPLNQLLQGDELTAVKKTL HCCCHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH DLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT CCCCCEEEEEECCEEEEEECCCEEEEEEHHHHHHHCCCEEEEECCCCEEECCHHHHHHHH LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLN HHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHCEEEECCCC DYTFATIFFDQENDTVSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSK CEEEEEEEEECCCCEEEEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHCCCCCCCCC NDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEFIITPYGLQNIKLNNDPKVFL CCCCCCEEEEEEEEECCCCCEEECHHHCCEECCCCCCCCEEEECCCCEEEEECCCCCEEE LENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC EDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNE HHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHEEECCCCCE LLNLDIIGSKKQAGQEWVFPISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTY EEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEHHHHHCCCCCCCCEEEE EIESLGLSRCT EECCCCCCCCC >Mature Secondary Structure MRQVTKSKKIKILPYPEWLVKAGMSKGIDHDRQHLGIILAAGEMIKVRQVNAEYKEKLKL CCCCCCCCCEEEEECHHHHHHCCHHCCCCCCCHHEEEEEECCCEEEEEECCHHHCCCEEE YLLNDNKNTQRSISFNTDWIELSVDAVSVPFINTPYSDGIIPEIIFEYPDTSKLLPVYEK EEEECCCCCCEEEEECCCEEEEEEEEEEECEECCCCCCCCCHHHEECCCCCCCCCCCEEC GEDESIFFESWDKQNAEFGVVESEYVIILIPEVSKDRLKSFSTSGGIDTVLGFYQDIFSF CCCCEEEEECCCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHH NNSLAGLSFEPQRYSDGNTRNRYFAKADKGGGGAAYYSNNWIASSSGSINTFWLSPNATN CCCCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEECCEEEECCCCEEEEEECCCCCC WGCLHEIAHGYQGGFIDDKYFSTREVWNNIYAACYQDVMLGAEKFNKGWLYNFGKQKEVE CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHH KSILNNINNGKEVNAWGERSKLYFIMLMLEKAGVNCFTHFNQIYRERKNTDQSVGSVLDM HHHHHCCCCCCEECCCCCCCCEEEEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LSNSFATVENRVDVTPFLQMVGGHISKNQYQRNLFSHAKAVYPLNQLLQGDELTAVKKTL HCCCHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHH DLNSELSLVDVDSIEFTDIKSNLTLQFSIDDFAQIYGEELLILNGDNYVYNQSIMDKKQT CCCCCEEEEEECCEEEEEECCCEEEEEEHHHHHHHCCCEEEEECCCCEEECCHHHHHHHH LYNLPVGAYTLRIPTGRNKKYAPQINYLIVKNEDSQTQVDFVHRIGSPIVSQKISLQGLN HHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHCEEEECCCC DYTFATIFFDQENDTVSVDITKTKPHYHFPGMYARIRIKDKDNNELLNEVITGTNQSLSK CEEEEEEEEECCCCEEEEEEEECCCCEECCCEEEEEEEECCCCHHHHHHHHCCCCCCCCC NDFPLSSCYVIDIFHKEPGRVKLTPAYKGVIDNKSSYNEFIITPYGLQNIKLNNDPKVFL CCCCCCEEEEEEEEECCCCCEEECHHHCCEECCCCCCCCEEEECCCCEEEEECCCCCEEE LENIKSAAETLRSHPIMWHANFSEAKDNIYLAIDIFPSPQKEGLLEQYADCISSYYEKPN EHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC EDLGNAFSFIFKGINDREFLTAKLNLVTKKLEVKIVSGTPHSGFKRTYAVLRYFNADGNE HHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHEEECCCCCE LLNLDIIGSKKQAGQEWVFPISGYGGEKLYLQHVEPKNRLVITNIMQGIRLSSRTSIQTY EEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEEEHHHHHCCCCCCCCEEEE EIESLGLSRCT EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA