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The map label for this gene is 170025861

Identifier: 170025861

GI number: 170025861

Start: 4024171

End: 4025403

Strand: Reverse

Name: 170025861

Synonym: YPK_3646

Alternate gene names: NA

Gene position: 4025403-4024171 (Counterclockwise)

Preceding gene: 170025862

Following gene: 170025860

Centisome position: 85.84

GC content: 46.07

Gene sequence:

>1233_bases
ATGACAACTTTATCACCGGCAATTCCGGTCAATCGCCGTAGTGAAATGCTGTGCAGCATAGCAGCGTTACTCTTAGGTAT
TAGTATGCCAACGAATAATCAGCTAATGAGTGTTTCATTGGTTTTGATTATTATCAGTTTGATCATTAACCGAAAATCCC
TTGATTTTAAACCGTTGCTCACCAGTCCATTAGTCTATCTACCGGCAGCTATGTTTGTGTTACTGGCGTTATCATTGTTG
TATCAAAACAACAGCTATGGCCCGGATATGGTAGGAAAATATAAGAAACTTCTTTATATCTTGCCATTGGCCCTGTTCTT
TATGAACCAGCCACGGTTGATCAAACTGTTCTGTACCGGCTTTCTCGTCGCTAACGCTGTCATATTGGCCGGATCTCTGG
CCGTGGGTGTTTTACACATTCCGTTGAGTGGTGTGGACCCCACTAACCCGACCATTTTTAAACTGCAAATTACCCAAAAC
TTCTTTATGGCGCTGGCGGCGTTACTCTGGCTGGTACTGGCGTTTCAACATCAGGGGTGGAAACGTTGGGGTTACAGTGT
GTTAGTGGTGGCCGCAAGTTACAGCATCTTATTCTTGGTATTGGGCCGCACCGGTTATGTTGCCTTGATAGTGGGTTTAG
GGGTATGGCTATTTTTCTCTCTGGGCAATCGCCAGCGGTTAACACTGGTCGTGCTAGGTGCATTGGCCTTTGCTGCCCTG
ATCTTTATCCCGAACAAAGCCACAGATCGTATCGTACAGGGCGTTGATGAGATAAAAGTGTGTATGGCCGCATCGGCAAC
TGATGCCGCAGACGCATGTAATTCCTCCATGGGGCAGCGTTCTGCTTTTGTGGTTGAAGCTGCCCGGTTAATTAAAGAAT
CACCTATTCTTGGTCATGGCGCGGGTGGTTTTTATTATGAAAATAAAGAAGTGGACTACAAAGTCAATAACCCGCACAAC
CAGTATCTACTGGAAACGATTCAATCAGGTGTGATTGGTCTATTCCTCTTTTTGGCGTGGGTTATCTGCTGTTATCGTGT
TATTTGGCAGCAAACACCGGCTCTGCGCAATGTGCTGTTGGCGGTATTGACCAGTTATATGGCATGTAACTTCTTCAATT
CATTTCTGCTGGATTCGTCTGAAGGCCACCTGTTTATGATTTTTGTGGCGGTTCTGGCGGGCTATTCGGTGAGCGGTTCT
CAATCCATAGCAGGTAAACGGCTGCCAACGTAG

Upstream 100 bases:

>100_bases
TTAGTGATGTCATAGACGCAGTTGATTCCTGGCGAGTTGCCAAAGGGAATTAGTGGGTCAGTCGCTTTATTTTTCCTAAC
CAGCTCGAGCTGAGAAAATT

Downstream 100 bases:

>100_bases
CAGAGAGACGCAATACACATTCAGAATGCTGACAAACCCCGATGACTCGATCTGAAACGGTGAGGATAGGCAGGGGAGTA
AAGCGTCCGCGCCAGGGAGG

Product: O-antigen polymerase

Products: NA

Alternate protein names: O-Antigen Polymerase; O-Antigen Biosynthesis Protein Wzy_C Domain Protein; Lipid A Core -O-Antigen Ligase; Inner Membrane Protein

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTTLSPAIPVNRRSEMLCSIAALLLGISMPTNNQLMSVSLVLIIISLIINRKSLDFKPLLTSPLVYLPAAMFVLLALSLL
YQNNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTGFLVANAVILAGSLAVGVLHIPLSGVDPTNPTIFKLQITQN
FFMALAALLWLVLAFQHQGWKRWGYSVLVVAASYSILFLVLGRTGYVALIVGLGVWLFFSLGNRQRLTLVVLGALAFAAL
IFIPNKATDRIVQGVDEIKVCMAASATDAADACNSSMGQRSAFVVEAARLIKESPILGHGAGGFYYENKEVDYKVNNPHN
QYLLETIQSGVIGLFLFLAWVICCYRVIWQQTPALRNVLLAVLTSYMACNFFNSFLLDSSEGHLFMIFVAVLAGYSVSGS
QSIAGKRLPT

Sequences:

>Translated_410_residues
MTTLSPAIPVNRRSEMLCSIAALLLGISMPTNNQLMSVSLVLIIISLIINRKSLDFKPLLTSPLVYLPAAMFVLLALSLL
YQNNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTGFLVANAVILAGSLAVGVLHIPLSGVDPTNPTIFKLQITQN
FFMALAALLWLVLAFQHQGWKRWGYSVLVVAASYSILFLVLGRTGYVALIVGLGVWLFFSLGNRQRLTLVVLGALAFAAL
IFIPNKATDRIVQGVDEIKVCMAASATDAADACNSSMGQRSAFVVEAARLIKESPILGHGAGGFYYENKEVDYKVNNPHN
QYLLETIQSGVIGLFLFLAWVICCYRVIWQQTPALRNVLLAVLTSYMACNFFNSFLLDSSEGHLFMIFVAVLAGYSVSGS
QSIAGKRLPT
>Mature_409_residues
TTLSPAIPVNRRSEMLCSIAALLLGISMPTNNQLMSVSLVLIIISLIINRKSLDFKPLLTSPLVYLPAAMFVLLALSLLY
QNNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTGFLVANAVILAGSLAVGVLHIPLSGVDPTNPTIFKLQITQNF
FMALAALLWLVLAFQHQGWKRWGYSVLVVAASYSILFLVLGRTGYVALIVGLGVWLFFSLGNRQRLTLVVLGALAFAALI
FIPNKATDRIVQGVDEIKVCMAASATDAADACNSSMGQRSAFVVEAARLIKESPILGHGAGGFYYENKEVDYKVNNPHNQ
YLLETIQSGVIGLFLFLAWVICCYRVIWQQTPALRNVLLAVLTSYMACNFFNSFLLDSSEGHLFMIFVAVLAGYSVSGSQ
SIAGKRLPT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44909; Mature: 44778

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSPAIPVNRRSEMLCSIAALLLGISMPTNNQLMSVSLVLIIISLIINRKSLDFKPLL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
TSPLVYLPAAMFVLLALSLLYQNNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTG
HCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FLVANAVILAGSLAVGVLHIPLSGVDPTNPTIFKLQITQNFFMALAALLWLVLAFQHQGW
HHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCH
KRWGYSVLVVAASYSILFLVLGRTGYVALIVGLGVWLFFSLGNRQRLTLVVLGALAFAAL
HHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IFIPNKATDRIVQGVDEIKVCMAASATDAADACNSSMGQRSAFVVEAARLIKESPILGHG
HHCCCCHHHHHHHCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
AGGFYYENKEVDYKVNNPHNQYLLETIQSGVIGLFLFLAWVICCYRVIWQQTPALRNVLL
CCCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AVLTSYMACNFFNSFLLDSSEGHLFMIFVAVLAGYSVSGSQSIAGKRLPT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTLSPAIPVNRRSEMLCSIAALLLGISMPTNNQLMSVSLVLIIISLIINRKSLDFKPLL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH
TSPLVYLPAAMFVLLALSLLYQNNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTG
HCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FLVANAVILAGSLAVGVLHIPLSGVDPTNPTIFKLQITQNFFMALAALLWLVLAFQHQGW
HHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCH
KRWGYSVLVVAASYSILFLVLGRTGYVALIVGLGVWLFFSLGNRQRLTLVVLGALAFAAL
HHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IFIPNKATDRIVQGVDEIKVCMAASATDAADACNSSMGQRSAFVVEAARLIKESPILGHG
HHCCCCHHHHHHHCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
AGGFYYENKEVDYKVNNPHNQYLLETIQSGVIGLFLFLAWVICCYRVIWQQTPALRNVLL
CCCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AVLTSYMACNFFNSFLLDSSEGHLFMIFVAVLAGYSVSGSQSIAGKRLPT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA