Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is yjjZ [H]

Identifier: 170025852

GI number: 170025852

Start: 4014027

End: 4014365

Strand: Reverse

Name: yjjZ [H]

Synonym: YPK_3637

Alternate gene names: 170025852

Gene position: 4014365-4014027 (Counterclockwise)

Preceding gene: 170025854

Following gene: 170025850

Centisome position: 85.6

GC content: 49.56

Gene sequence:

>339_bases
ATGATATTGGTTATGATTATCATTATCATTATCATTTGGGTGGGCATCATCATGATTACATCGACATTTGCAGCTTACCG
TTCGTGGGGGATCACCGGGTTGCTCAGCCGTGGCATGTCCAGTGGCTGGGGAATATTGCTGCCTTTTACCTTGTTACCTG
TACTGGGCTGGGTAGATATCTCTATCGGCCAATTGCGCATTCTTATTGTCGTGGCGATGCTGGCAACCGTCAGCATGTTG
TACCACGTGCGGTTGCGGCACTTTTTGTTACTGCCATCTTGTCTGGCGCTGTTAGGCGGCTTGGTCGCGCTAATGCTAAT
GCACGGTGGTGTGTCATGA

Upstream 100 bases:

>100_bases
GTTTCAGCCTGTCATCATGATGTCGTTCAACGGCGCAAAATGATGCATATGACGCGAGCGTGTAGATAACGACATGGTGC
AGAGTGCCAAAGAGTGATAT

Downstream 100 bases:

>100_bases
TGGGGGTATCCGATCATCGGGGATAATATAAAACGTGAGGTAATACAGTAAGTAACAGCTTGGATGATTGACGTTGAAAT
GGAATATATTGTGGGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSML
YHVRLRHFLLLPSCLALLGGLVALMLMHGGVS

Sequences:

>Translated_112_residues
MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSML
YHVRLRHFLLLPSCLALLGGLVALMLMHGGVS
>Mature_112_residues
MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSML
YHVRLRHFLLLPSCLALLGGLVALMLMHGGVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082437, Length=75, Percent_Identity=49.3333333333333, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009885
- ProDom:   PD058594 [H]

Pfam domain/function: PF07256 DUF1435 [H]

EC number: NA

Molecular weight: Translated: 12216; Mature: 12216

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SIGQLRILIVVAMLATVSMLYHVRLRHFLLLPSCLALLGGLVALMLMHGGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SIGQLRILIVVAMLATVSMLYHVRLRHFLLLPSCLALLGGLVALMLMHGGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]