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The map label for this gene is ygcA [C]

Identifier: 170025665

GI number: 170025665

Start: 3785999

End: 3786124

Strand: Reverse

Name: ygcA [C]

Synonym: YPK_3450

Alternate gene names: 170025665

Gene position: 3786124-3785999 (Counterclockwise)

Preceding gene: 170025667

Following gene: 170025664

Centisome position: 80.74

GC content: 50.79

Gene sequence:

>126_bases
ATGCGCCATGTTTTATCAGGAGTGGGTTATCGTCTTGCTCAGGTGCGTACGTTGGATATGTTCCCGCACACCGGGCATCT
TGAATCTATGGCGCTGTTTATTCAGGCGTCAGAGGTCGCAAAGTAG

Upstream 100 bases:

>100_bases
TCTTGCTGCGGGTAGCCTGTTTGGTAAGCCGTTGAGGGTGAAGGAGTTGCGGCGTTTGTCGCTAATGGGCTGTATAATGC
GTTAAGCAATAATTTACCCA

Downstream 100 bases:

>100_bases
GGAGAAGTTATGGTTGCGGTACGAAGTGCGCATTTAAACCCAGCGGGTGAGTTTGCTCTTGACGATTGGATTGCCAGTTT
AGGGCTTGCCAATCCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MRHVLSGVGYRLAQVRTLDMFPHTGHLESMALFIQASEVAK

Sequences:

>Translated_41_residues
MRHVLSGVGYRLAQVRTLDMFPHTGHLESMALFIQASEVAK
>Mature_41_residues
MRHVLSGVGYRLAQVRTLDMFPHTGHLESMALFIQASEVAK

Specific function: Could Be A 23s rRNA (Uracil-5-)-Methyltransferase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4598; Mature: 4598

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS01231 TRMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHVLSGVGYRLAQVRTLDMFPHTGHLESMALFIQASEVAK
CCCCHHHCCHHHHHEEEECCCCCCCCCCHHHHEEECCCCCC
>Mature Secondary Structure
MRHVLSGVGYRLAQVRTLDMFPHTGHLESMALFIQASEVAK
CCCCHHHCCHHHHHEEEECCCCCCCCCCHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA