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The map label for this gene is yfjD [H]

Identifier: 170025582

GI number: 170025582

Start: 3692620

End: 3693903

Strand: Direct

Name: yfjD [H]

Synonym: YPK_3367

Alternate gene names: 170025582

Gene position: 3692620-3693903 (Clockwise)

Preceding gene: 170025581

Following gene: 170025592

Centisome position: 78.74

GC content: 46.42

Gene sequence:

>1284_bases
GTGTTGGAGCACGTATCAACTAGCTCATTGATCATTATCTTAGTCATTATGATCATCGTTTCGGCTTACTTCTCTGCATC
AGAAACCGGCATGATGACACTTAACCGGTATCGTCTGCGTCACTTATCCAAACAAGGCAACCGTGCCGCACGTCGGGTGG
AAAAGCTCCTGAACCGCCCAGATCGCCTGATAAGTTTGGTACTGATTGGCAATAATCTGGTTAACATACTGGCATCTGCG
CTGGCGACGATTGTCGGTATTCGTTTATACGGTGATGCCGGAGTTGCCATCGCAACCGGGGTGCTAACTTTTGTGATCCT
GATTTTTGCTGAAGTCCTGCCAAAAACTATCGCTGCCCTTTATCCTGAACGTGTCGCATTCCCTAGCAGTATGCTCCTGG
CCCCCCTGCAAAAGATCATGCTGCCACTCGTGTGGCTACTGAATACCATTACTCGCGGGTTGATGCATTTATGTGGCATT
AGAGGAAATGTGCACAGCAGTGATGCGATGAGTAAAGATGAATTACGCACGATAGTGAGTGAGTCCCAATCAAAAATCTC
TCGCCGCAATCAAGACATGTTGATTTCAGTATTAGATCTGGAGAAAGTGACTGTCAACGATATCATGGTACCGCGTAATG
AAGTCGTCGGTATCGATATTAATGATGATTGGAAGTCAATCATGCGCCAGCTTACACACTCGCCCCATGGTCGCATTGTG
TTATATCGCCAGTCCTTGGATGACGCTATTGGCATGCTACGTGTGCGGGAAGCCTATCGGTTGATGACGGAGAAAAAGGA
ATTTAATAAAGAGAACCTACTGCGTGCAGCCGATGAAATCTACTTTATCCCCGAAGGCACGCCACTCAATGTACAACTGG
TGAAATTCCAACGTAATAAAAAGAAAGTCGGCATGATTGTCGATGAATATGGTGATATTCAAGGTTTAGTGACAGTTGAA
GATATTCTGGAGGAGATCGTGGGGGATTTTACCACCTCAATGTCCCCTACGCTTGCGGAAGAAGTTAATCCACAGAGCGA
CGGCTCGGTACTGATTGATGGCAGTGCCAGCGTCCGCGAAGTGAACAAAGCCTTTAACTGGTCATTACCCGTCGATGCCC
GCACCATCAATGGCATGTTGCTGGAAGAGCTAGAAGAAATTCCGCAAGCACATATTCACGTCCGTCTTGGAAATTACCAA
ATTGAAGTACTTGATGTGCAGGAAAATATGATTAAGCGGGTTAAAATTACCCCAATGACTTCCGCAGAACATTCGACCCT
ATAA

Upstream 100 bases:

>100_bases
GCCGTCTGGTCCAGGAAATTATGGTTCGCTAGTGATTACCGTAACCACCTACGCAAGGCCCAACGGAACTGGCTGAGGCC
TCATCACGATAAGGAATACT

Downstream 100 bases:

>100_bases
ATAATTCTGTCTAAGCGATAGTCAGTTTAATAAAAAAGACGCTTTAATCAGCGCCTTTTATCATTCTCCTGCCTACTGAT
ACTGAGCACTAAATATGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MLEHVSTSSLIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASA
LATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGI
RGNVHSSDAMSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVNDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIV
LYRQSLDDAIGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVE
DILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQ
IEVLDVQENMIKRVKITPMTSAEHSTL

Sequences:

>Translated_427_residues
MLEHVSTSSLIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASA
LATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGI
RGNVHSSDAMSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVNDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIV
LYRQSLDDAIGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVE
DILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQ
IEVLDVQENMIKRVKITPMTSAEHSTL
>Mature_427_residues
MLEHVSTSSLIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRPDRLISLVLIGNNLVNILASA
LATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGI
RGNVHSSDAMSKDELRTIVSESQSKISRRNQDMLISVLDLEKVTVNDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIV
LYRQSLDDAIGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNKKKVGMIVDEYGDIQGLVTVE
DILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVREVNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQ
IEVLDVQENMIKRVKITPMTSAEHSTL

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=380, Percent_Identity=24.7368421052632, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI94681046, Length=340, Percent_Identity=23.2352941176471, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI145693175, Length=405, Percent_Identity=78.2716049382716, Blast_Score=665, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=433, Percent_Identity=23.7875288683603, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI87082033, Length=243, Percent_Identity=27.5720164609054, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1786879, Length=265, Percent_Identity=25.2830188679245, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788119, Length=238, Percent_Identity=25.6302521008403, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6324512, Length=348, Percent_Identity=24.1379310344828, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47848; Mature: 47848

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHVSTSSLIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
DRLISLVLIGNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAAL
HHHEEEEEECCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVHSSDAMSKDELRTIVS
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
ESQSKISRRNQDMLISVLDLEKVTVNDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIV
HHHHHHHHCCHHHEEEEECCCCEEHHHEECCCCCEEEEEECHHHHHHHHHHHCCCCCCEE
LYRQSLDDAIGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNK
EECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEECCCCCCCEEEEEEEECCC
KKVGMIVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVRE
CHHCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCHHHH
VNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMT
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECHHHHHHHEEECCCC
SAEHSTL
CCCCCCC
>Mature Secondary Structure
MLEHVSTSSLIIILVIMIIVSAYFSASETGMMTLNRYRLRHLSKQGNRAARRVEKLLNRP
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH
DRLISLVLIGNNLVNILASALATIVGIRLYGDAGVAIATGVLTFVILIFAEVLPKTIAAL
HHHEEEEEECCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVHSSDAMSKDELRTIVS
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
ESQSKISRRNQDMLISVLDLEKVTVNDIMVPRNEVVGIDINDDWKSIMRQLTHSPHGRIV
HHHHHHHHCCHHHEEEEECCCCEEHHHEECCCCCEEEEEECHHHHHHHHHHHCCCCCCEE
LYRQSLDDAIGMLRVREAYRLMTEKKEFNKENLLRAADEIYFIPEGTPLNVQLVKFQRNK
EECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCEEECCCCCCCEEEEEEEECCC
KKVGMIVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSVLIDGSASVRE
CHHCEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCHHHH
VNKAFNWSLPVDARTINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQENMIKRVKITPMT
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECHHHHHHHEEECCCC
SAEHSTL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]