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The map label for this gene is pcaC [H]

Identifier: 170024425

GI number: 170024425

Start: 2432342

End: 2432764

Strand: Direct

Name: pcaC [H]

Synonym: YPK_2194

Alternate gene names: 170024425

Gene position: 2432342-2432764 (Clockwise)

Preceding gene: 170024424

Following gene: 170024426

Centisome position: 51.87

GC content: 50.59

Gene sequence:

>423_bases
ATGATGAAAAAGAAAATTCAACAGTATCTGCTTTGCACTGCTCTTACATTTGCCGGCTCAATGGCTAGCATTGCTCACGC
GCAGGATGCGGCGAAAAATAACACGAAGCAACCGTCTCGGGCGCAACAATTGATGGGGGATATCGCCCCCAAGATGGCGC
AACTCACTGACGATGTCCTGTATGCCGATATCTGGGAACGGCCGCAACTCTCAAAACGTGACAGGAGCCTGGTGACGGTC
AGTGCTCTGGTGGCAATGGATCGCCCTGACCAATTGCGTTCTCATCTGCGCCTGGCTCGCCAGAACGGTGTCACTGAAGA
AGAGTTGGTTGAGGCTATAACCCAACTTGCCTTCTATTCTGGATGGCCAACGGCAGTAACGGCGATATCCATTGCAAAAG
AAGTATTTAAAGAAGGGAAATAG

Upstream 100 bases:

>100_bases
GGCAACCGTCAGCCTGGTGACATGAAGCATCCGGTAAAATCACGTTATCGCCACCGACATAATCCCCCCTCTTTAATCGT
GCCGATAACAAAGGAAATGG

Downstream 100 bases:

>100_bases
TTTTTATCTTCAATGGATTAATTAGAATATCTCACGTTAAAGGATTGAATCGATATGAAAGTTTTCCTGATCACACTGGC
TGCGCTTTTACTGCCCGGTA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MMKKKIQQYLLCTALTFAGSMASIAHAQDAAKNNTKQPSRAQQLMGDIAPKMAQLTDDVLYADIWERPQLSKRDRSLVTV
SALVAMDRPDQLRSHLRLARQNGVTEEELVEAITQLAFYSGWPTAVTAISIAKEVFKEGK

Sequences:

>Translated_140_residues
MMKKKIQQYLLCTALTFAGSMASIAHAQDAAKNNTKQPSRAQQLMGDIAPKMAQLTDDVLYADIWERPQLSKRDRSLVTV
SALVAMDRPDQLRSHLRLARQNGVTEEELVEAITQLAFYSGWPTAVTAISIAKEVFKEGK
>Mature_140_residues
MMKKKIQQYLLCTALTFAGSMASIAHAQDAAKNNTKQPSRAQQLMGDIAPKMAQLTDDVLYADIWERPQLSKRDRSLVTV
SALVAMDRPDQLRSHLRLARQNGVTEEELVEAITQLAFYSGWPTAVTAISIAKEVFKEGK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 15578; Mature: 15578

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKKIQQYLLCTALTFAGSMASIAHAQDAAKNNTKQPSRAQQLMGDIAPKMAQLTDDVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YADIWERPQLSKRDRSLVTVSALVAMDRPDQLRSHLRLARQNGVTEEELVEAITQLAFYS
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GWPTAVTAISIAKEVFKEGK
CCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKKKIQQYLLCTALTFAGSMASIAHAQDAAKNNTKQPSRAQQLMGDIAPKMAQLTDDVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YADIWERPQLSKRDRSLVTVSALVAMDRPDQLRSHLRLARQNGVTEEELVEAITQLAFYS
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GWPTAVTAISIAKEVFKEGK
CCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]