| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yhhW [C]
Identifier: 170024339
GI number: 170024339
Start: 2334190
End: 2335059
Strand: Direct
Name: yhhW [C]
Synonym: YPK_2105
Alternate gene names: 170024339
Gene position: 2334190-2335059 (Clockwise)
Preceding gene: 170024337
Following gene: 170024340
Centisome position: 49.78
GC content: 48.85
Gene sequence:
>870_bases ATGAAAAAAGTTCAAGGTATTTACCGTGCACCTCGTCAACATTGGGTAGGCGATGGCTTCCCAGTACGTTCAATGTTTTC TTATCAAAGTCACGGTAAACAACTGAGTCCGTTCTTGCTACTGGACTATGCTGGCCCCATGGATTTTACCCCGACGACGC AACGCCGTGGGGTTGGGCAACATCCACATCGTGGTTTTGAAACGGTCACCATCGTTTATCACGGTGAAGTCGAACACCGC GATTCAACCGGTAACGGCGGTATCATTGGTCCGGGTGATGTGCAATGGATGACTGCAGGTGCAGGTATTCTGCATGAGGA GTTCCACTCAGATGCTTTTGCGCAAAAAGGCGGCCCTTTTGAGATGGTACAGCTATGGGTCAATTTACCTGCTAAAGATA AAATGACCGCACCCGGCTATCAGGCGATTCGTCGTGAGGCTATTCCACAGGTTAATTTACCTGACGATGCAGGGAATCTG CGGGTTATTGCCGGTGAATATGCCGGAAACATTGGGCCAGCAAAGACATTTTCACCACTGAATGTCTGGGATATTCGGTT AACTCAAGGAAAGAGTTGTGAGTTTTCACTACCCGCAGGCTGGAACACCGCACTGATTGTGTTACACGGAACCCTCTTAG TGAATGGTGATGCCATTGCCCGCGAAGCGGAAATGGTACTACTGGATCCCACGGGCACTCATCTGAGTATTGAGGCCAAT AATGACACCGTGTTACTGCTGTTAAGCGGTGAGCCAATCGACGAGCCTATTGTCGGTTATGGCCCATTTGTGATGAATAC TCAGGCACAAATAGCCGAAGCTATCGCTGATTTTAATGGTGGCCGCTTTGGGAATATGGATGTTGCATAA
Upstream 100 bases:
>100_bases AAACTATACTTTATCCAACTTGGCTGCAGGGCTATCGCGAACCCTAATTTATCGCGTCCCCTGTACTGCAATTGATTAAT GATGGCGTAAGGAGAAGATA
Downstream 100 bases:
>100_bases CGGCATCTATCCGCCATTACCTGTCTGCTATTACCTGTCTACCCTCTGGGCAGGTAATAGCATTTTTTATTGATGAGAGC CAACTCTTGCTAGCGACTAT
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKKVQGIYRAPRQHWVGDGFPVRSMFSYQSHGKQLSPFLLLDYAGPMDFTPTTQRRGVGQHPHRGFETVTIVYHGEVEHR DSTGNGGIIGPGDVQWMTAGAGILHEEFHSDAFAQKGGPFEMVQLWVNLPAKDKMTAPGYQAIRREAIPQVNLPDDAGNL RVIAGEYAGNIGPAKTFSPLNVWDIRLTQGKSCEFSLPAGWNTALIVLHGTLLVNGDAIAREAEMVLLDPTGTHLSIEAN NDTVLLLLSGEPIDEPIVGYGPFVMNTQAQIAEAIADFNGGRFGNMDVA
Sequences:
>Translated_289_residues MKKVQGIYRAPRQHWVGDGFPVRSMFSYQSHGKQLSPFLLLDYAGPMDFTPTTQRRGVGQHPHRGFETVTIVYHGEVEHR DSTGNGGIIGPGDVQWMTAGAGILHEEFHSDAFAQKGGPFEMVQLWVNLPAKDKMTAPGYQAIRREAIPQVNLPDDAGNL RVIAGEYAGNIGPAKTFSPLNVWDIRLTQGKSCEFSLPAGWNTALIVLHGTLLVNGDAIAREAEMVLLDPTGTHLSIEAN NDTVLLLLSGEPIDEPIVGYGPFVMNTQAQIAEAIADFNGGRFGNMDVA >Mature_289_residues MKKVQGIYRAPRQHWVGDGFPVRSMFSYQSHGKQLSPFLLLDYAGPMDFTPTTQRRGVGQHPHRGFETVTIVYHGEVEHR DSTGNGGIIGPGDVQWMTAGAGILHEEFHSDAFAQKGGPFEMVQLWVNLPAKDKMTAPGYQAIRREAIPQVNLPDDAGNL RVIAGEYAGNIGPAKTFSPLNVWDIRLTQGKSCEFSLPAGWNTALIVLHGTLLVNGDAIAREAEMVLLDPTGTHLSIEAN NDTVLLLLSGEPIDEPIVGYGPFVMNTQAQIAEAIADFNGGRFGNMDVA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=258, Percent_Identity=35.2713178294574, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI4505823, Length=258, Percent_Identity=35.2713178294574, Blast_Score=147, Evalue=1e-35, Organism=Escherichia coli, GI1789847, Length=200, Percent_Identity=26.5, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31418; Mature: 31418
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVQGIYRAPRQHWVGDGFPVRSMFSYQSHGKQLSPFLLLDYAGPMDFTPTTQRRGVGQ CCCCCHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCC HPHRGFETVTIVYHGEVEHRDSTGNGGIIGPGDVQWMTAGAGILHEEFHSDAFAQKGGPF CCCCCCEEEEEEEECCEEECCCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCH EMVQLWVNLPAKDKMTAPGYQAIRREAIPQVNLPDDAGNLRVIAGEYAGNIGPAKTFSPL HEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC NVWDIRLTQGKSCEFSLPAGWNTALIVLHGTLLVNGDAIAREAEMVLLDPTGTHLSIEAN EEEEEEEECCCCCEEECCCCCCEEEEEEEEEEEECCCHHCCCCCEEEECCCCCEEEEEEC NDTVLLLLSGEPIDEPIVGYGPFVMNTQAQIAEAIADFNGGRFGNMDVA CCEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKKVQGIYRAPRQHWVGDGFPVRSMFSYQSHGKQLSPFLLLDYAGPMDFTPTTQRRGVGQ CCCCCHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCC HPHRGFETVTIVYHGEVEHRDSTGNGGIIGPGDVQWMTAGAGILHEEFHSDAFAQKGGPF CCCCCCEEEEEEEECCEEECCCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCH EMVQLWVNLPAKDKMTAPGYQAIRREAIPQVNLPDDAGNLRVIAGEYAGNIGPAKTFSPL HEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC NVWDIRLTQGKSCEFSLPAGWNTALIVLHGTLLVNGDAIAREAEMVLLDPTGTHLSIEAN EEEEEEEECCCCCEEECCCCCCEEEEEEEEEEEECCCHHCCCCCEEEECCCCCEEEEEEC NDTVLLLLSGEPIDEPIVGYGPFVMNTQAQIAEAIADFNGGRFGNMDVA CCEEEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]