Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170023485

Identifier: 170023485

GI number: 170023485

Start: 1364287

End: 1365126

Strand: Direct

Name: 170023485

Synonym: YPK_1239

Alternate gene names: NA

Gene position: 1364287-1365126 (Clockwise)

Preceding gene: 170023484

Following gene: 170023486

Centisome position: 29.09

GC content: 46.07

Gene sequence:

>840_bases
ATGGAGCTAGACCCGCGCATAATCTCGTTATCAATAGAAATCGATGGCAAGTTACACGTTTACACCGATCTCTATATATC
AGCATCCGGGCAAAAAACAGCGGGTTCGTTGCAAAATGAATGCACGATAAAAATTGCTAATCTTAAACAGTCTGACCGCA
ATTTTCTGATCACAGAAACATCACCGCTCAACCGCCCGCGCAGGCGCAAGAAAATTATTCTATTCGCAGGGCGTAAAAGC
TACGGTACGTTTAAGGTTTTTGAAGGGGACATTATCGGATGCACCCCGAGCCAGCCACCTGACATCATGCTCACAATGAA
AGCGCGCACTGGTGCTTTCTTTATGACAGACATGCTCAGTTCAAGTTATGCAGCAGCGGTGCCACTCAGCAAAATAGCCG
CCGACACTGCACAGAGCATGGATTTAACCCTCGATTTTCAGGCGTCGGACAAGAATATCAGTAATTACAATTTCACCGGG
GCTAAGCTAAAACAGGTTGATAAGCTAGGTAGCGCAGGCAGCTATAACGCTTACATCGATGATGACCGATTGATTATAAA
AAATAGAGATGTTCCGCTACTCAATGAGACCGTCACGCTCAATAAAAATACTGGAATGATTGGCGTCCCTGAGGTCACGG
AAGAGGGCGTTAAAGTGAAATACCTGCTTGATCCGTCGAGCCGTCCGGGGGCCAGCCTGACCATAGAAAGTGATTTAAAT
CCGGCAGCTAATGGCACCTTTGTTATTTACAAACTCAGTTATGACATCAGTAACCGAGACACACCTTTTTATCACACGGC
GGAATGTCGGAGATTGGGGCTATGGCAGACACTACTTTAA

Upstream 100 bases:

>100_bases
AAACTTTTACTTTAATACCCCAGATGATGAATATCCTCATTACGAAAGATTTATAGATAACCATCGTTTTTATTATATTC
CGGCTACTGAGGTGTAAATC

Downstream 100 bases:

>100_bases
CCGATGTTGACCCGGCGTTAACCGGCTCGCTATCTGGCACGTTGGAATACGTTTTCAAGAAGATGCTACAGGGAATAGAC
GGCCAGTTGCCAGCGCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Related-Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITETSPLNRPRRRKKIILFAGRKS
YGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLSSSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTG
AKLKQVDKLGSAGSYNAYIDDDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN
PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL

Sequences:

>Translated_279_residues
MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITETSPLNRPRRRKKIILFAGRKS
YGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLSSSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTG
AKLKQVDKLGSAGSYNAYIDDDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN
PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL
>Mature_279_residues
MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITETSPLNRPRRRKKIILFAGRKS
YGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLSSSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTG
AKLKQVDKLGSAGSYNAYIDDDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN
PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30884; Mature: 30884

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITET
CCCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEC
SPLNRPRRRKKIILFAGRKSYGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLS
CCCCCCCCCEEEEEEECCCCCCEEEEEECCEEECCCCCCCCEEEEEECCCCEEEEEHHHC
SSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTGAKLKQVDKLGSAGSYNAYID
CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCCCEEEC
DDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN
CCEEEEECCCCCEECEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCC
PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL
CCCCCEEEEEEEEECCCCCCCCCEECHHHHHCCCHHHCC
>Mature Secondary Structure
MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITET
CCCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEC
SPLNRPRRRKKIILFAGRKSYGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLS
CCCCCCCCCEEEEEEECCCCCCEEEEEECCEEECCCCCCCCEEEEEECCCCEEEEEHHHC
SSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTGAKLKQVDKLGSAGSYNAYID
CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCCCEEEC
DDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN
CCEEEEECCCCCEECEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCC
PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL
CCCCCEEEEEEEEECCCCCCCCCEECHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA