| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023464
Identifier: 170023464
GI number: 170023464
Start: 1347711
End: 1348106
Strand: Direct
Name: 170023464
Synonym: YPK_1218
Alternate gene names: NA
Gene position: 1347711-1348106 (Clockwise)
Preceding gene: 170023463
Following gene: 170023465
Centisome position: 28.74
GC content: 49.49
Gene sequence:
>396_bases ATGAAAATCAATAATTTTCGTTTCAGCCAGCGCAGTGAAAACAACTTGAAAGGCGTTAACCCAGCACTGGTGCAAGTCGT TCGCCGCGCTCTGGAGTTATCGATTGTTGATTTCGGCGTAACTGAGGGGCTTCGAACTGTTGAGCGACAAAAAGAGCTGG TAGCCAAGGGTGCCAGCCAGACGATGAATAGCCGACATATTACCGGCCACGCTATCGACGTATTTGCTTACCCAGCAGCA AGCGGTTCATGGGAATGGAAATACTATGAGCAGATAGCGACAGCATTCAAGCTGGCAGCCAAAGACGTTGGCGTTTCTAT CGAGTGGGGCGGCGACTGGAAGACGCTAAAAGACGGGCCTCATTTTCAACTGTCACACAAAGAATATCAGTCGTGA
Upstream 100 bases:
>100_bases GGCTGGACATTAATACTTAGTGTATTTATCGGCTACATGGGTACTGACTATATCGGATCTGTACTTAAACGAATGGTTGG CAGCAAGACTGGGGGCAGCA
Downstream 100 bases:
>100_bases GTCGGGTAACGGCAATACTCATCGCTGTAATAGCCGCATTGCTCGTGGGCGTTGTTTACTATCAAGGGCAAACCACAACG CTTCAGAGTGATGTAGCAAC
Product: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Products: NA
Alternate protein names: Phage-Related Protein; Endolysin; Bacteriophage P7 Related Protein; Phagelysin; Phage Protein; Lysozyme; Phage Capsid Scaffolding Protein; Peptidase; L-Alanyl-D-Glutamate Peptidase
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKINNFRFSQRSENNLKGVNPALVQVVRRALELSIVDFGVTEGLRTVERQKELVAKGASQTMNSRHITGHAIDVFAYPAA SGSWEWKYYEQIATAFKLAAKDVGVSIEWGGDWKTLKDGPHFQLSHKEYQS
Sequences:
>Translated_131_residues MKINNFRFSQRSENNLKGVNPALVQVVRRALELSIVDFGVTEGLRTVERQKELVAKGASQTMNSRHITGHAIDVFAYPAA SGSWEWKYYEQIATAFKLAAKDVGVSIEWGGDWKTLKDGPHFQLSHKEYQS >Mature_131_residues MKINNFRFSQRSENNLKGVNPALVQVVRRALELSIVDFGVTEGLRTVERQKELVAKGASQTMNSRHITGHAIDVFAYPAA SGSWEWKYYEQIATAFKLAAKDVGVSIEWGGDWKTLKDGPHFQLSHKEYQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14784; Mature: 14784
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINNFRFSQRSENNLKGVNPALVQVVRRALELSIVDFGVTEGLRTVERQKELVAKGASQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH TMNSRHITGHAIDVFAYPAASGSWEWKYYEQIATAFKLAAKDVGVSIEWGGDWKTLKDGP CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC HFQLSHKEYQS CEEECCCCCCC >Mature Secondary Structure MKINNFRFSQRSENNLKGVNPALVQVVRRALELSIVDFGVTEGLRTVERQKELVAKGASQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH TMNSRHITGHAIDVFAYPAASGSWEWKYYEQIATAFKLAAKDVGVSIEWGGDWKTLKDGP CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC HFQLSHKEYQS CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA