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The map label for this gene is 170023463

Identifier: 170023463

GI number: 170023463

Start: 1347392

End: 1347724

Strand: Direct

Name: 170023463

Synonym: YPK_1217

Alternate gene names: NA

Gene position: 1347392-1347724 (Clockwise)

Preceding gene: 170023461

Following gene: 170023464

Centisome position: 28.73

GC content: 49.85

Gene sequence:

>333_bases
ATGAAAATGCACAGGTCACCGGATATTTGGAGTCTGATCATTACGTGGATCGGAGAGCATCGCGGCGAACTCATTAGCGC
CGGGCTGGCTGCAATCATGGCAACGCTGCGCGGCATGTATGCGGGTGGAGGGCGGACGCAAGTCATGCTTGATGCTGCAA
TGTGCTCACTCATTGCCTGGTTTATTGAAGACGTACTAACGATGTTCGGCGTAGAGCCGGGCTGGACATTAATACTTAGT
GTATTTATCGGCTACATGGGTACTGACTATATCGGATCTGTACTTAAACGAATGGTTGGCAGCAAGACTGGGGGCAGCAA
TGAAAATCAATAA

Upstream 100 bases:

>100_bases
TGGTATCCCGGCACTTATTCAGGGCTGCGCTTATGCGTGGCCTTTTCTATTTATAACCCCCGACAATGCCGGGAAAGGAT
TCCCCGGATGGGGGGTGGAT

Downstream 100 bases:

>100_bases
TTTTCGTTTCAGCCAGCGCAGTGAAAACAACTTGAAAGGCGTTAACCCAGCACTGGTGCAAGTCGTTCGCCGCGCTCTGG
AGTTATCGATTGTTGATTTC

Product: phage holin

Products: NA

Alternate protein names: Phage Holin Lambda Family; Holin [Includes Lysis Protein S; Phage Lysis Protein S; Lysis Protein S And Lysis Inhibitor; Phage Holin-Like Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKMHRSPDIWSLIITWIGEHRGELISAGLAAIMATLRGMYAGGGRTQVMLDAAMCSLIAWFIEDVLTMFGVEPGWTLILS
VFIGYMGTDYIGSVLKRMVGSKTGGSNENQ

Sequences:

>Translated_110_residues
MKMHRSPDIWSLIITWIGEHRGELISAGLAAIMATLRGMYAGGGRTQVMLDAAMCSLIAWFIEDVLTMFGVEPGWTLILS
VFIGYMGTDYIGSVLKRMVGSKTGGSNENQ
>Mature_110_residues
MKMHRSPDIWSLIITWIGEHRGELISAGLAAIMATLRGMYAGGGRTQVMLDAAMCSLIAWFIEDVLTMFGVEPGWTLILS
VFIGYMGTDYIGSVLKRMVGSKTGGSNENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12002; Mature: 12002

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMHRSPDIWSLIITWIGEHRGELISAGLAAIMATLRGMYAGGGRTQVMLDAAMCSLIAW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FIEDVLTMFGVEPGWTLILSVFIGYMGTDYIGSVLKRMVGSKTGGSNENQ
HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKMHRSPDIWSLIITWIGEHRGELISAGLAAIMATLRGMYAGGGRTQVMLDAAMCSLIAW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
FIEDVLTMFGVEPGWTLILSVFIGYMGTDYIGSVLKRMVGSKTGGSNENQ
HHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA