Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170023177

Identifier: 170023177

GI number: 170023177

Start: 1049182

End: 1049892

Strand: Reverse

Name: 170023177

Synonym: YPK_0928

Alternate gene names: NA

Gene position: 1049892-1049182 (Counterclockwise)

Preceding gene: 170023178

Following gene: 170023176

Centisome position: 22.39

GC content: 58.23

Gene sequence:

>711_bases
GTGACGTGGCATAAATCGACGTTACGCATTCCGAAAAATCTGGCCCCGGTCAGCTGCTCGACCGTGGCCGTTCATCCCTG
GGCGTTTGGCGTAGGCCAGACGGAGAAATCAGGTTCGTTTCTGAGTCCGGCTAATGCAATTAACGCACTCGCCAGCCGGT
TAGCCGGCGCAGACAGTGATCAGGATGTGCTGATATTGCTTATTACTGCGAAAACCCTGGCTGAATTTATTACGTTGTTG
ACCGCCGCCGCTGAAGTGTTCCCGATACCGTCGCTAACGCAAGTTCAGCGACGGGCTAAGGCGGCGTTAAGTCTCGATAG
CAGTAAAATGCAAATCCCGGCAAAGCCCGGCGGCTTGCCCGCCAGTGCGCCGCTGTCAGTTGCGACTACGCGCCAGGCGT
CCGGGGCGCAAGCCTTGCAAAAAGCGATCAGTGATACCGCCGCCGGCAGCAGTAGCGCGGCTATCGGTACCGCGCTGGCT
GCATTCGCACAGCAGCGCGCCGCAATGCTGGCCGAGGTAATGAGTGGGCTGGAACAATTGCAGGGGGCGAGTGTCCCGGT
CTGGTCGCTGGCCGTTGATGGCAACACGCAGACGGCAATCGCAGAGATGAAGAAAGAGATCCCCGATAGCCAGGCCATTT
TTAGCCTGGCGTTACTGTTTGTGGGCGCAGATTTGGCCCCACTGCGGGCAATGGTGGTAAATCATGACTGA

Upstream 100 bases:

>100_bases
CGGGTACAGAGCAAGAACAAGAGCGACTGGCTGCATTAAAACAGTATCGTATTGCATTGATGCGACTTGATATTAATGAG
CAGTGGCCGGTGTTGCCTGC

Downstream 100 bases:

>100_bases
TATTGTGATGTTGGCGCTTGACGGCGAAGCTATTCCGCTAAAAAACATCATTGTGACGCTCTCTATGTCAATACAAGACA
AAGACCAAAGCGGGCAGGCC

Product: putative bacteriophage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSDQDVLILLITAKTLAEFITLL
TAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLPASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALA
AFAQQRAAMLAEVMSGLEQLQGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD

Sequences:

>Translated_236_residues
MTWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSDQDVLILLITAKTLAEFITLL
TAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLPASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALA
AFAQQRAAMLAEVMSGLEQLQGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD
>Mature_235_residues
TWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSDQDVLILLITAKTLAEFITLLT
AAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLPASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALAA
FAQQRAAMLAEVMSGLEQLQGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24297; Mature: 24166

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSD
CCCCCCHHCCCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
QDVLILLITAKTLAEFITLLTAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLP
CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCC
ASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALAAFAQQRAAMLAEVMSGLEQL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD
CCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure 
TWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSD
CCCCCHHCCCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
QDVLILLITAKTLAEFITLLTAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLP
CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCC
ASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALAAFAQQRAAMLAEVMSGLEQL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD
CCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA