Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023162

Identifier: 170023162

GI number: 170023162

Start: 1031744

End: 1032379

Strand: Direct

Name: 170023162

Synonym: YPK_0913

Alternate gene names: NA

Gene position: 1031744-1032379 (Clockwise)

Preceding gene: 170023161

Following gene: 170023163

Centisome position: 22.0

GC content: 52.04

Gene sequence:

>636_bases
ATGCCTGATTTCATTAGCCGATTAACAAGCCTGCGCCTGCCGTCATGGATGGATAAAGGCGAGGCTAACAAGTTATTACA
GGTGTGCCGCCAGCACTGGCAGTGGGTTAATGGCTGGCTGAATTGGCCGCTTAATCAGTTTGATGCCGCCACCTGCGCGG
TGCCGTTGTTGAACGTGTTGGCCTATCAGCGCGATATCAACCGCTTTAACGGTGAGCCGTTGAGCCTGTTTCGTAAGCGA
GTGCAATACGCTTTTATTAACGCCGCTGATGCCGGTTCAGTCGCGGGATTCAGCGCCATCTTTAAGCGGTTAGATATTGG
TGTGATAACGCAACTGGAGCGCCAGCCGGGCCATGACTGGGACGTCATTCTTATCCGGGTGAATGATAACCAGATAGCGG
AAAACAACACGTTGATGATGGCGCTGATCCGCCAGTATGGCCGCACATGCCGTCGCTACATTTTCCAAGTGCTCAACGCC
AGAACAGTGACGATGCACTGTGGGGAATTCAGCAACGAATACCGCAACCACCACGCAAAATTAATGATCGCACCCGGCAC
GATTAAGGGCGCGGTGGCAGTGATACCCACCCAGTTACAGCATTCGCATGAAATCTATGCGGCAAAATTGAAATAA

Upstream 100 bases:

>100_bases
AAGACGTTTTCACTGATTGAGTCATTGAGTTTTTCACTGACGGACATTGTGAGTGAACTCAGTGTGCCGCGCCTGAACAG
CGTAACGGTGGTAATTGAAA

Downstream 100 bases:

>100_bases
GGATATTGATATGGCAACGGTGATTACCCGCGCATTTGAACACTGGCAAGCGGGGCAGGTGTTAAATAACTTACCGGCCC
GCCCGGATACCATTATTTTT

Product: phage-like protein

Products: NA

Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVLAYQRDINRFNGEPLSLFRKR
VQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDWDVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNA
RTVTMHCGEFSNEYRNHHAKLMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK

Sequences:

>Translated_211_residues
MPDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVLAYQRDINRFNGEPLSLFRKR
VQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDWDVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNA
RTVTMHCGEFSNEYRNHHAKLMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK
>Mature_210_residues
PDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVLAYQRDINRFNGEPLSLFRKRV
QYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDWDVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNAR
TVTMHCGEFSNEYRNHHAKLMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24235; Mature: 24104

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVL
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AYQRDINRFNGEPLSLFRKRVQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDW
HHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCE
DVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNARTVTMHCGEFSNEYRNHHAK
EEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCEE
LMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK
EEECCCCCCCHHEEECHHHHHCCHHEEEECC
>Mature Secondary Structure 
PDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVL
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AYQRDINRFNGEPLSLFRKRVQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDW
HHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCE
DVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNARTVTMHCGEFSNEYRNHHAK
EEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCEE
LMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK
EEECCCCCCCHHEEECHHHHHCCHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA