Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170023159

Identifier: 170023159

GI number: 170023159

Start: 1028266

End: 1030242

Strand: Direct

Name: 170023159

Synonym: YPK_0910

Alternate gene names: NA

Gene position: 1028266-1030242 (Clockwise)

Preceding gene: 170023158

Following gene: 170023160

Centisome position: 21.93

GC content: 50.68

Gene sequence:

>1977_bases
ATGAAAAGTCTCGATTTTACCTTAAGCATGATTGATAAAATCACACGGCCATTAAAATCCGTGCAAGCCTCTGTAAAAGG
ATTTGCGGAAAGTTCTCAGGCGGCTTTCGGTAAAATTGCCATTGGCGGGGCCGCGCTGTTCGGTGTCGTACAGGGAATGA
AGGGCGCACTGGGACCCGCAGCTGAATTTGCCGGCGCGCTTAATGAGGCCAGCGCCAAGGGCGTGAGTGATAGCGCCTTG
CAAAAGATGAGCGCTGACGCCCTGAAATTCAGTATGCAGTATGGCCGCAGCGCCGTGGATGTTGTGCGTTCAAGTGCAGA
CGTGCGCAGTGCAATCGGTACGCTGTCGGACCGGGATTTGCCCCGCTTCACCCTGGCCACCAATGTGTTGGCCGCTGGCA
TGAAAACCACTGGCAGCGAAGCCGCCGCCTACATGGGGCAAATGTATAACCAATTTGACAGCTACGCCGCCCGCATAGGT
AAAGTGAAGTTTGCCGAAGAGGTGGCCGGTAAAACGGCATATATGGCGCAGTCATTTGGCGTCAGTATGCAGACTATGGC
TGACTTGATGGCCGGTTCAAAAGGGGTTGGCGCTAACTACGGTGTCGGCATTGATGAGCAATTTGCCGTATTGGGTCAGT
TACAAAAAACCTTAGGAACCGAAGCCAGCGGCAGTTATGAAAACTTTATGAAGGGGGCCGCAGACGGTGCAAAAACGCTG
GGGTTGAGCTTTGTGAATGCCTCCGGTCAGATGCTGACCATGCCGGAAATGCTGGATAAGTTACAAGGCCGCTACGGTAA
AACCATTGAGGGCAATTTAAAGGCACAGGCCGAGCTGGATAAAGCCTTTGGTGATGGTGCCAATGTTATTAAACAGCTAT
ACGGCAATGTCGATTTACTGAAACGCAATATCGGTGAGCTGGGCAGTAATGACGGGATGAAACGGGCCGGTGAGATGGCC
AAGAAAATGGCCGACCCATGGGAACGGCTGATGGCTATCTGGACGGGAATGCGGGTAATTTTGGGCTTAACCCTGTTACC
TGTGCTGTATCCCATCATGAACCGCGTGTCTGAAATCGGCGAGAGGTTCGCCCGCTGGATGCAGTTATTCCCCAATATCG
CGCGGCTGATCGGTTATGCCATGCTGGCGTTGCTGAGTTTTGCCGCTGCCGGGGCCATCGCCAATATGGTGATGGGGATC
AGCATGTTTATCTGGATGGGGTTAAAACTGCTGTGGGGCGCATTGTGTGCGGTGACAAAAATCCACACGGCGGCTATTTG
GTTATATAACACGGCAATCATCGCTGTTAACGCCACCATGCGGATTATGCGCGGCGTGTTACTGGCGGTACGTATGGCGG
CAATATCGGCGGGCATTTCCTTTAGTTTCATGACATGGCCTATCCTGCTTATCATTGTGGCCATTGCTGCGTTGGCGGCA
GGTATTTATTACTTGATTACCTACTGGGATGAGATTAAAGCGGCCATTGCTGACACTGCGGCTTTCCAGTGGTTATCCGG
GGTAGTGACCGCAGTTGGGGCCGTATTTAGTGTTGTATGGAAAGGTATTGTTGCTGGGTGGGAGTGGCTGGTATCGGCTA
TCACCGGGTTATCACCACTGGCCGGTATCAGTGCCATGGCTGATACCATTGGCAATGTGTTCAGTGGATTATGGGACTGG
CTGAAAAGTACCTTTGCCGAAACTTACAATTGGATCATCGATAAACTGAATTATATCCCCGGTGTAAATATTGAGGCGAA
AAGTATCCCTTCACAGGAAAGTAGCCCAATCAGTTCAGCCAATAATTTATTAACCGGTGGCCAGATCCAAAATATTGAAA
AGGGCGGGATTAATAAAGAAATCAGCAATAACGCCAAAACGGTGACCGATAACAGTAAGCGGTTTGAGAACGTGAATATT
AATATGCAGGGTGGCATGACGCCAGAGCAGCTAATGGAATGGCAGGAATTAAATTAA

Upstream 100 bases:

>100_bases
TAGAGAGTCTGGCCCGTGCCGTTTGGTTAGATAACCGTTATTGGGATAATACCCGTATTTCTATTGCCAATGGAATTGGT
CTGGCATTTAAAGGCGATTA

Downstream 100 bases:

>100_bases
TGACGGAATTGATGTATATCGACCTGCTGATAAAAGACGGCGACTTTGTATTAAATACCGGTAATGAACCGACTCTATGC
AATAACCGGATTAGCATTGG

Product: TP901 family phage tail tape measure protein

Products: NA

Alternate protein names: Phage Tail Tape Measure Protein Core Region; Tail Tape Measure Protein; Tail Length Determinator; Phage Tail Length Determinator; Tail Tape Measure Protein Bacteriophage Origin; Phage-Related Tail Protein; Prophage; Phage-Like Protein; Phage Gene; Phage Tail Tape Measure Family Protein; Phage Tail Tape Measure Protein Family; Phage Tail Protein; Phage Tail Tape Measure Protein Core Region

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPAAEFAGALNEASAKGVSDSAL
QKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDLPRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIG
KVKFAEEVAGKTAYMAQSFGVSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL
GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLLKRNIGELGSNDGMKRAGEMA
KKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIGERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGI
SMFIWMGLKLLWGALCAVTKIHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA
GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPLAGISAMADTIGNVFSGLWDW
LKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSANNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNI
NMQGGMTPEQLMEWQELN

Sequences:

>Translated_658_residues
MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPAAEFAGALNEASAKGVSDSAL
QKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDLPRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIG
KVKFAEEVAGKTAYMAQSFGVSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL
GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLLKRNIGELGSNDGMKRAGEMA
KKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIGERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGI
SMFIWMGLKLLWGALCAVTKIHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA
GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPLAGISAMADTIGNVFSGLWDW
LKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSANNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNI
NMQGGMTPEQLMEWQELN
>Mature_658_residues
MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPAAEFAGALNEASAKGVSDSAL
QKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDLPRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIG
KVKFAEEVAGKTAYMAQSFGVSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL
GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLLKRNIGELGSNDGMKRAGEMA
KKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIGERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGI
SMFIWMGLKLLWGALCAVTKIHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA
GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPLAGISAMADTIGNVFSGLWDW
LKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSANNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNI
NMQGGMTPEQLMEWQELN

Specific function: Unknown

COG id: COG5283

COG function: function code S; Phage-related tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70421; Mature: 70421

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AEFAGALNEASAKGVSDSALQKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
PRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIGKVKFAEEVAGKTAYMAQSFG
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
VSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL
CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLL
HHHEECCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHH
KRNIGELGSNDGMKRAGEMAKKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIG
HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGISMFIWMGLKLLWGALCAVTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AGISAMADTIGNVFSGLWDWLKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
NNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNINMQGGMTPEQLMEWQELN
CCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AEFAGALNEASAKGVSDSALQKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
PRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIGKVKFAEEVAGKTAYMAQSFG
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
VSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL
CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLL
HHHEECCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHH
KRNIGELGSNDGMKRAGEMAKKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIG
HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGISMFIWMGLKLLWGALCAVTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AGISAMADTIGNVFSGLWDWLKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
NNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNINMQGGMTPEQLMEWQELN
CCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA