| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023152
Identifier: 170023152
GI number: 170023152
Start: 1024397
End: 1025068
Strand: Direct
Name: 170023152
Synonym: YPK_0903
Alternate gene names: NA
Gene position: 1024397-1025068 (Clockwise)
Preceding gene: 170023151
Following gene: 170023153
Centisome position: 21.84
GC content: 54.76
Gene sequence:
>672_bases ATGATTAACGGTGAGCTGAATACCACGCAGTTAACTGCGTTGCGAGAGGCACTTAAACGGCTGGAGTTGCCGCCTAAAAA GCGCCAGCGGCTGTTATGGCGGCTGGCCAAGTACGGGGTGATGGTTGCCGCCAAGCGTAATGTGCGTAACCAACAATCAC CGGGTGGCACGCCGTGGCAGGGGCGACAGACCAACCAGCGCGGCAAGATGCTGCGCAATATGCCGAAATTGATGCATATC CGTGAAATGCCGGAGATTGAGGCCGTCCGGTTGTATTTGCAGGGTGGCCAGTATCGCAACGGTGAAAAACCGGTACCGGC GGGTGTGGTGGGGTATGGCCAGCAAAATGGCATGAACGTCACGGTTAATCGCAGCACGGTGGCCAAGACGACTGACCCAG AGCGGAAGGCCACTATAAAACAGGCCAAACGACTGCGGGCGTTGGGGTACAAGGTCAAAAAGGGCAAGGGATGGCGTAAG CCGCCGTATAAAGAAATTGCCGGAAACATGCGTTTTGATCAGGCCGGTTTGCTGATCCGGGAGTTAAGTGGTAAGGCTGC TAAATCAACATGGACAGTGGATGTCCCGGCGCGTGAGTTTTTGGGTATGAACGATGAAGATTTTAATAAAGCCTTGGCGC GGCAGTTGCAGGCCATAGGATTTGGCACGTGA
Upstream 100 bases:
>100_bases GGGCCAGATGGCGACTGACCGATCCGCAGTTATGGCTGGCCACTGAGGGCACGGTATTTGGCGCTGATACCCACGGCGCA CCACTGGGTGAAAGCTGATT
Downstream 100 bases:
>100_bases TACGTGCAACACATTAAGGGGTGACGATGAGTTGGCCACAGGTAAATATTGACCAAAAAAACCAGTTACAGGGCGAAACC AAAGAGATAGAACGGGCTGT
Product: putative phage gene
Products: NA
Alternate protein names: Phage-Like Protein; Phage Protein; Prophage; Virion Morphogenesis Protein
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MINGELNTTQLTALREALKRLELPPKKRQRLLWRLAKYGVMVAAKRNVRNQQSPGGTPWQGRQTNQRGKMLRNMPKLMHI REMPEIEAVRLYLQGGQYRNGEKPVPAGVVGYGQQNGMNVTVNRSTVAKTTDPERKATIKQAKRLRALGYKVKKGKGWRK PPYKEIAGNMRFDQAGLLIRELSGKAAKSTWTVDVPAREFLGMNDEDFNKALARQLQAIGFGT
Sequences:
>Translated_223_residues MINGELNTTQLTALREALKRLELPPKKRQRLLWRLAKYGVMVAAKRNVRNQQSPGGTPWQGRQTNQRGKMLRNMPKLMHI REMPEIEAVRLYLQGGQYRNGEKPVPAGVVGYGQQNGMNVTVNRSTVAKTTDPERKATIKQAKRLRALGYKVKKGKGWRK PPYKEIAGNMRFDQAGLLIRELSGKAAKSTWTVDVPAREFLGMNDEDFNKALARQLQAIGFGT >Mature_223_residues MINGELNTTQLTALREALKRLELPPKKRQRLLWRLAKYGVMVAAKRNVRNQQSPGGTPWQGRQTNQRGKMLRNMPKLMHI REMPEIEAVRLYLQGGQYRNGEKPVPAGVVGYGQQNGMNVTVNRSTVAKTTDPERKATIKQAKRLRALGYKVKKGKGWRK PPYKEIAGNMRFDQAGLLIRELSGKAAKSTWTVDVPAREFLGMNDEDFNKALARQLQAIGFGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25198; Mature: 25198
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGELNTTQLTALREALKRLELPPKKRQRLLWRLAKYGVMVAAKRNVRNQQSPGGTPWQ CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCC GRQTNQRGKMLRNMPKLMHIREMPEIEAVRLYLQGGQYRNGEKPVPAGVVGYGQQNGMNV CCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCCEE TVNRSTVAKTTDPERKATIKQAKRLRALGYKVKKGKGWRKPPYKEIAGNMRFDQAGLLIR EEECCEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHH ELSGKAAKSTWTVDVPAREFLGMNDEDFNKALARQLQAIGFGT HHCCCCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MINGELNTTQLTALREALKRLELPPKKRQRLLWRLAKYGVMVAAKRNVRNQQSPGGTPWQ CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCC GRQTNQRGKMLRNMPKLMHIREMPEIEAVRLYLQGGQYRNGEKPVPAGVVGYGQQNGMNV CCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCCEE TVNRSTVAKTTDPERKATIKQAKRLRALGYKVKKGKGWRKPPYKEIAGNMRFDQAGLLIR EEECCEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCCCHHHHHHH ELSGKAAKSTWTVDVPAREFLGMNDEDFNKALARQLQAIGFGT HHCCCCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA