| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023039
Identifier: 170023039
GI number: 170023039
Start: 898556
End: 899914
Strand: Reverse
Name: 170023039
Synonym: YPK_0790
Alternate gene names: NA
Gene position: 899914-898556 (Counterclockwise)
Preceding gene: 170023041
Following gene: 170023038
Centisome position: 19.19
GC content: 49.52
Gene sequence:
>1359_bases ATGCTAACACGCCGGAAATTTTTGATGATGAGTGCCGGAGCAGGTCTTTTACTCTCTGTACCCATGTTGGCTCGAACCGG TGTTCAGCCTGCACAAGCTGCTACCGCCATTACGCAAGTTTTTGGTGACGGGATCCGGCTAACCGCTGTTGCGGTCGAAT ATCCGACAGAAGTCAGCGCTGAAGGGCTAAACCCCGCCGACTTTCATGTTGAAGGGCGAACAGTAACCGGTGTATGGACC AGCACTTCTACTAATCCGGCAGATATAGCGCCCTCAGGACGCTATATGATTATAGCGCTGTCACCTGATGACAAGAATGC AACGCTGGCCGAACAGGTGCAGCCAAATAGTAAAAACAACAGCAACAAATCTGCCAATGGAAGAGGCGGCCCCGGTAATG CAGGCGATATTCCTGCCTATGATACGGTTTACCGGACAGCTCAAGCCACGGTACTGCGCCTTCCGTCAGTTCATACCGCC AGTGGTGATACGCTTCCCGCTAGCGAGAAAGCGTTGACAACCCAATATGTGGAAAACTTGATCGTTGATGATTTTCAGCA GCTTGAGTTTTATGATGAAAAAACAGGTAAAAAGCTGAAATACAACCTTTTCATCCCCAAAGACTATAGCCCTGATAAAA ACTATAGCCCTGATAAGGCTTGGCCGCTGGTGTTATTCATGCATGATGCTGGCGCCACCAGCGATGTTACACGCACCACC CTGTATCAAGGCTTAGGCGCTATTGCTTGGGCAAGCCCAGAAGATCAGGCACAGCGCCCCTGCTTTGTTCTTGCACCTCA GTATGAAGAAATCATTGCCGATGATGACTCAAAAACATCTGACATGCTGGACACCACCATTGATCTTATCAATGTACTTT CAGAGCAGTACAACATTGATAAGAGCCGTATCTATGCCACAGGGCAGTCGGGTGGATGCATGATGACGATAGCGATGAAC ATCAAGTATCCGGATTTCTTCGCGGCCTCTTTTTTGGTTGCGGGTCAGTGGGATCCCGCGCTGGTGAAACCTCTTGCCCA GCAAAAACTCTGGATTCTGGTTTCTCAGGACGATAACAAAGCCTGGCCAGGTCAGAATGCCATCATTGATGTTCTGGAAA AAGAGGGTGTCCAAATCAGCCGTGCAATATGGGACGGAACATGGAATGAAGAGCAATTTCGTCAGGCTTTTGAACAAATA GAGGCAGAAAAAAGCCCGATTAACTATGTGGCATTTCGTGAAGGCACCGTGATTCCTGAGGGGCAATCCACCGAAGGTGC CAGCGGGCATCGCAATACCTGGCGAATTGCCTATACCATCTCCCCCATACGCGAATGGATTTTCAGGCAACAGCGCTAG
Upstream 100 bases:
>100_bases AATATGAGTCATCTATTTGCCACGAATCGCATAAATTCTTACAGCCTTGTTAAAATGAAACTAAAGTAGATACAACGTGC TGAGTTAAAGGAGACAAATA
Downstream 100 bases:
>100_bases TTGATTAACGAGGGCTTACCCAACGCCGCACGCTTCTCTTTGATCGTTCGACAGCCCTCACCCTTCGACAAAACGACGAT TTATTGAGCATTAAAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Pyrroline-5-Carboxylate Reductase; Peptidase-Like Protein; Phospholipase/Carboxylesterase Family; Serine/Arginine Repetitive Matrix
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCMMTIAMN IKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQI EAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR
Sequences:
>Translated_452_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCMMTIAMN IKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQI EAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR >Mature_452_residues MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSAEGLNPADFHVEGRTVTGVWT STSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNNSNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTA SGDTLPASEKALTTQYVENLIVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNIDKSRIYATGQSGGCMMTIAMN IKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNKAWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQI EAEKSPINYVAFREGTVIPEGQSTEGASGHRNTWRIAYTISPIREWIFRQQR
Specific function: Unknown
COG id: COG4099
COG function: function code R; Predicted peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49837; Mature: 49837
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSA CCCCCEEEEEECCCCCEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC EGLNPADFHVEGRTVTGVWTSTSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNN CCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCC SNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTASGDTLPASEKALTTQYVENL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEECCCCCCCCCCHHHHHHHHHHHH IVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNID HHHCCCCEEECCCHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC KSRIYATGQSGGCMMTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNK CCEEEEECCCCCEEEEEEEECCCCCHHHHHEEEECCCCHHHHHHHCCCEEEEEEECCCCC AWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQIEAEKSPINYVAFREGTVIPE CCCCCCHHHHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEECCC GQSTEGASGHRNTWRIAYTISPIREWIFRQQR CCCCCCCCCCCCEEEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MLTRRKFLMMSAGAGLLLSVPMLARTGVQPAQAATAITQVFGDGIRLTAVAVEYPTEVSA CCCCCEEEEEECCCCCEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC EGLNPADFHVEGRTVTGVWTSTSTNPADIAPSGRYMIIALSPDDKNATLAEQVQPNSKNN CCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCC SNKSANGRGGPGNAGDIPAYDTVYRTAQATVLRLPSVHTASGDTLPASEKALTTQYVENL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEECCCCCCCCCCHHHHHHHHHHHH IVDDFQQLEFYDEKTGKKLKYNLFIPKDYSPDKNYSPDKAWPLVLFMHDAGATSDVTRTT HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH LYQGLGAIAWASPEDQAQRPCFVLAPQYEEIIADDDSKTSDMLDTTIDLINVLSEQYNID HHHCCCCEEECCCHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC KSRIYATGQSGGCMMTIAMNIKYPDFFAASFLVAGQWDPALVKPLAQQKLWILVSQDDNK CCEEEEECCCCCEEEEEEEECCCCCHHHHHEEEECCCCHHHHHHHCCCEEEEEEECCCCC AWPGQNAIIDVLEKEGVQISRAIWDGTWNEEQFRQAFEQIEAEKSPINYVAFREGTVIPE CCCCCCHHHHHHHHCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEECCC GQSTEGASGHRNTWRIAYTISPIREWIFRQQR CCCCCCCCCCCCEEEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA