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The map label for this gene is 170023038

Identifier: 170023038

GI number: 170023038

Start: 897347

End: 898180

Strand: Reverse

Name: 170023038

Synonym: YPK_0789

Alternate gene names: NA

Gene position: 898180-897347 (Counterclockwise)

Preceding gene: 170023039

Following gene: 170023036

Centisome position: 19.15

GC content: 38.49

Gene sequence:

>834_bases
ATGACAAACAAAATAATGCCAAAAGTTAATCGCGAGGGGCGCAGATCATTCTTACAAAAATCGATTGCTGTCGTTGCTAC
CGGTGTAGTGACCCGTGCATTCTCTGCGCCGAATATTACATTAGAGAAAGATACCAAACCTCAACCTGGAACATGTATTT
TATCTGTTGAACAAATGGCTGGCCCATATATTAAAAGCAATATGCCAATAAGAAGGAACATAGCAGAAAATGAAAACGGT
GTGCCTTTACTCCTTAAAATAACAGTTATCGATTCAAATTCATGCCGCCCATTAGAATATTATTACGTTGATATATGGCA
ATGTAATGCTCGGGGGCGTTATTCGGGATGGAGTTATGTTGACCCTGATAAAGACGCACCAAGTGGAGAAGTTGCGAGTA
TCAACAGAACTGATGAGAAAAGTTTTTTAAGGGGCTCACAGGTAACTGATAGTCATGGGCTCGTCAGGTTTACCAGTATC
TACCCTGGGTTTTATGCCGGGCGTGCTGTTCATATTCATTTTGCCATTAAGCCACCAAAAGCATCTCCTCAGGAGGTCGA
TAAATACTCATTTATTAGTCAGCTTTACTTCCCAGAAGAGTTCAATAGCGAAATAGAACAACGGGCTGAATATTCGCTGA
GAAAAATCAAAAGGTTAATAAATAGTGATGATGAAATATTTAACGAAGCAAATGGTGAAAATGCAGTCCTTGCCGTGAGT
AAAATCAATGAAAATGACATTAATGATGGTGTTTTGGCGGAAATAACGATAGCAATAAATAAAGATATCTTGTCTAAAAG
AATTGACCCTAAGGATATTTTAAAGATCACATAG

Upstream 100 bases:

>100_bases
ATTTTGAATGGCTATTTTTGAAGGCAACCGAAGGGATGCATTAGATATTTACGACACGTGAATGTTAATTTAACCATATA
AACCAAGAGAGGTTTATGAC

Downstream 100 bases:

>100_bases
AGCCAAACACATTCAATTTTATTAGTATCTAAAATCAATAAATTAGTTTTTTATGAAAGCTATCCCATTGAACACCGTCC
CCTTTTACAGTGGCGAAAAA

Product: intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: Protocatechuate Dioxygenase; Dioxygenase; Twin-Arginine Translocation Pathway Signal; Protocatechuate 3 4-Dioxygenase Beta Chain; Protocatechuate 3 4-Dioxygenase; Dioxygenase Subfamily Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Protocatechuate 3,4-Dioxygenase Protein Beta Chain; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit; Protocatechuate 3 4-Dioxygenase Subunit Beta-Like Protein; Catechol 1 2-Dioxygenase; Ring-Cleaving Dioxygenase Protein; Intradiol Dioxygenase

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTNKIMPKVNREGRRSFLQKSIAVVATGVVTRAFSAPNITLEKDTKPQPGTCILSVEQMAGPYIKSNMPIRRNIAENENG
VPLLLKITVIDSNSCRPLEYYYVDIWQCNARGRYSGWSYVDPDKDAPSGEVASINRTDEKSFLRGSQVTDSHGLVRFTSI
YPGFYAGRAVHIHFAIKPPKASPQEVDKYSFISQLYFPEEFNSEIEQRAEYSLRKIKRLINSDDEIFNEANGENAVLAVS
KINENDINDGVLAEITIAINKDILSKRIDPKDILKIT

Sequences:

>Translated_277_residues
MTNKIMPKVNREGRRSFLQKSIAVVATGVVTRAFSAPNITLEKDTKPQPGTCILSVEQMAGPYIKSNMPIRRNIAENENG
VPLLLKITVIDSNSCRPLEYYYVDIWQCNARGRYSGWSYVDPDKDAPSGEVASINRTDEKSFLRGSQVTDSHGLVRFTSI
YPGFYAGRAVHIHFAIKPPKASPQEVDKYSFISQLYFPEEFNSEIEQRAEYSLRKIKRLINSDDEIFNEANGENAVLAVS
KINENDINDGVLAEITIAINKDILSKRIDPKDILKIT
>Mature_276_residues
TNKIMPKVNREGRRSFLQKSIAVVATGVVTRAFSAPNITLEKDTKPQPGTCILSVEQMAGPYIKSNMPIRRNIAENENGV
PLLLKITVIDSNSCRPLEYYYVDIWQCNARGRYSGWSYVDPDKDAPSGEVASINRTDEKSFLRGSQVTDSHGLVRFTSIY
PGFYAGRAVHIHFAIKPPKASPQEVDKYSFISQLYFPEEFNSEIEQRAEYSLRKIKRLINSDDEIFNEANGENAVLAVSK
INENDINDGVLAEITIAINKDILSKRIDPKDILKIT

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31164; Mature: 31033

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKIMPKVNREGRRSFLQKSIAVVATGVVTRAFSAPNITLEKDTKPQPGTCILSVEQMA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHHC
GPYIKSNMPIRRNIAENENGVPLLLKITVIDSNSCRPLEYYYVDIWQCNARGRYSGWSYV
CCHHHCCCCEECCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCC
DPDKDAPSGEVASINRTDEKSFLRGSQVTDSHGLVRFTSIYPGFYAGRAVHIHFAIKPPK
CCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCC
ASPQEVDKYSFISQLYFPEEFNSEIEQRAEYSLRKIKRLINSDDEIFNEANGENAVLAVS
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEE
KINENDINDGVLAEITIAINKDILSKRIDPKDILKIT
ECCCCCCCCCEEEEEEEEECHHHHHHCCCHHHHEEEC
>Mature Secondary Structure 
TNKIMPKVNREGRRSFLQKSIAVVATGVVTRAFSAPNITLEKDTKPQPGTCILSVEQMA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHHC
GPYIKSNMPIRRNIAENENGVPLLLKITVIDSNSCRPLEYYYVDIWQCNARGRYSGWSYV
CCHHHCCCCEECCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCC
DPDKDAPSGEVASINRTDEKSFLRGSQVTDSHGLVRFTSIYPGFYAGRAVHIHFAIKPPK
CCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCC
ASPQEVDKYSFISQLYFPEEFNSEIEQRAEYSLRKIKRLINSDDEIFNEANGENAVLAVS
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEE
KINENDINDGVLAEITIAINKDILSKRIDPKDILKIT
ECCCCCCCCCEEEEEEEEECHHHHHHCCCHHHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA