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The map label for this gene is lafT [H]

Identifier: 170022979

GI number: 170022979

Start: 788332

End: 788937

Strand: Direct

Name: lafT [H]

Synonym: YPK_0730

Alternate gene names: 170022979

Gene position: 788332-788937 (Clockwise)

Preceding gene: 170022978

Following gene: 170022980

Centisome position: 16.81

GC content: 48.84

Gene sequence:

>606_bases
ATGGTTGATGAAGGTGGTTTGAAACGCCTGGATGAGCATATTGAAATCCCCGCCAACAGTTCGGTATTTCAGCGTTACCC
GCTCATTTTACAGGACCTGCATTTGATCACCTTTATCTCTGATAATTTCCGCCTGATGGCGATGGGGAAAATTAATCAAC
ATGAGCTGGAAAGCATTTTAGAACAGGAGTTATCCGCCGTCGAAGAGGAGCTATTGGTGCCCTCCCGCTCCTTCCAGCGT
ATTGGCGAAGCCATGCCGGGGTTTGGTATCTGCGCCGCCGTGTTGGGTATCATCATTACCATGCAATCCATCGATGGCTC
AATTGCCATGATCGGTATAAAAGTTGCCGCTGCCTTGGTAGGTACCTTCCTCGGGGTGTTTATTTGTTATTGCCTGATGG
ATCCGTTGTCCAATGCCATGGAACAAGAGATCAAAAAGAAACTGGCACTATTTGAATGTGTGCGCATGGTGTTGGTTAAT
CATGTCGCGGGCAAGCCGTCGTTACTGGCTGTGGATGCGGGTCGCAAGATGCTACCGATGGACAACAAACCCACATTTGC
CACGTTGGACTCTTGGATCAATAAGCTGATAACGGCAGGCGTCTAA

Upstream 100 bases:

>100_bases
GAGTGGCCGCAACAATTACGCATGGCATTGGGGGAGCGCTTGCAGGTATACGGTTGAGTTTCAACAGCAATTATTGTTGT
TGTTGTATGAATTGCTGGAA

Downstream 100 bases:

>100_bases
TGAGAAATCATGCCAGTGGCGGGGCCACGACCATTATCAAGCGGGCAAACAGAAAAAAGCACCATGTCCGCCACTCCGGC
GCTTGGAAAGTGGCGTTTGC

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MVDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQR
IGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVN
HVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINKLITAGV

Sequences:

>Translated_201_residues
MVDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQR
IGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVN
HVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINKLITAGV
>Mature_201_residues
MVDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESILEQELSAVEEELLVPSRSFQR
IGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALVGTFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVN
HVAGKPSLLAVDAGRKMLPMDNKPTFATLDSWINKLITAGV

Specific function: Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=189, Percent_Identity=34.3915343915344, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR022522
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 22090; Mature: 22090

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESIL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHH
EQELSAVEEELLVPSRSFQRIGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALV
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GTFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVNHVAGKPSLLAVDAGRKMLPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
DNKPTFATLDSWINKLITAGV
CCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDEGGLKRLDEHIEIPANSSVFQRYPLILQDLHLITFISDNFRLMAMGKINQHELESIL
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCHHHHHHHH
EQELSAVEEELLVPSRSFQRIGEAMPGFGICAAVLGIIITMQSIDGSIAMIGIKVAAALV
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GTFLGVFICYCLMDPLSNAMEQEIKKKLALFECVRMVLVNHVAGKPSLLAVDAGRKMLPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
DNKPTFATLDSWINKLITAGV
CCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]