Click here to switch to the map view.

The map label for this gene is 170022978

Identifier: 170022978

GI number: 170022978

Start: 787488

End: 788288

Strand: Direct

Name: 170022978

Synonym: YPK_0729

Alternate gene names: NA

Gene position: 787488-788288 (Clockwise)

Preceding gene: 170022977

Following gene: 170022979

Centisome position: 16.79

GC content: 53.18

Gene sequence:

>801_bases
ATGATCACGCTGAACACGACCACGCTGAACACACTGTCTCAGATAACGGATTCGTTTGCCCCAACAAAGGAGGAGATAAA
AGTACCCGTTACCGCCCGCTCAGAGGGGGTCAGCGTTAGCAATCTGGCGAATTTCGATGCTGTTTTGTCACAGGCGCTGG
TGCCACATCAGCCAATCTCGTTAAGCCCTGCGGCGGTGGAGGAAGTTATCGCGGCGTTTGATGCAGAAGGTACGGTTGAT
AGCCATGAGGCTGATCTAACCCTGTCGGCGGATGAGCAGAATCAGCAACTGCTTGATGCATTGCTGCAAACTCAGCCTGA
AAATGTGTCACCAATGGCACTCAAACCCACAGTGCAGAGCCAGGCATTCCAATCATTGATATCAAAAGGCGAGCAGCCCA
CGCCACTCAGTGACAGCGTGCCCGTCAGCCTTTCTACACCGGAGCGTTCCCTGGTACAGAACGAGAGCCTATTTCCGCTT
CTCCGCAATGGGCCAAGTGCGAGTCAGGTGCAGATAGATAGCCCTGTACAAATCGGTAGCCCTGTACAAATCGGTAGCCC
TGTGCAAATCGGTAGCCCTGTGCAGATAGATAGCCCTGTACAGATAGATAGCCCTGTGCAAATCGATAGTCATGTACAAA
TCAATAGCCCTCTACAGATCGGTAGCCCTGTACTGAACGGCAGCCATGAAACCAGCACCGCCTCGCGTATTGATAGCCCA
CTCACGCTGGCCAATAACCGCGAAGAGTGGCCGCAACAATTACGCATGGCATTGGGGGAGCGCTTGCAGGTATACGGTTG
A

Upstream 100 bases:

>100_bases
AAAGCAGAGAAGGCTGCGAAAGATTATGCAGTCATCAGTGCCTATGCCGCTACGGCGATCCACGCCTATCAGGATATGGC
ACAGGAAGAGGGCCGCTAAG

Downstream 100 bases:

>100_bases
GTTTCAACAGCAATTATTGTTGTTGTTGTATGAATTGCTGGAAATGGTTGATGAAGGTGGTTTGAAACGCCTGGATGAGC
ATATTGAAATCCCCGCCAAC

Product: putative flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MITLNTTTLNTLSQITDSFAPTKEEIKVPVTARSEGVSVSNLANFDAVLSQALVPHQPISLSPAAVEEVIAAFDAEGTVD
SHEADLTLSADEQNQQLLDALLQTQPENVSPMALKPTVQSQAFQSLISKGEQPTPLSDSVPVSLSTPERSLVQNESLFPL
LRNGPSASQVQIDSPVQIGSPVQIGSPVQIGSPVQIDSPVQIDSPVQIDSHVQINSPLQIGSPVLNGSHETSTASRIDSP
LTLANNREEWPQQLRMALGERLQVYG

Sequences:

>Translated_266_residues
MITLNTTTLNTLSQITDSFAPTKEEIKVPVTARSEGVSVSNLANFDAVLSQALVPHQPISLSPAAVEEVIAAFDAEGTVD
SHEADLTLSADEQNQQLLDALLQTQPENVSPMALKPTVQSQAFQSLISKGEQPTPLSDSVPVSLSTPERSLVQNESLFPL
LRNGPSASQVQIDSPVQIGSPVQIGSPVQIGSPVQIDSPVQIDSPVQIDSHVQINSPLQIGSPVLNGSHETSTASRIDSP
LTLANNREEWPQQLRMALGERLQVYG
>Mature_266_residues
MITLNTTTLNTLSQITDSFAPTKEEIKVPVTARSEGVSVSNLANFDAVLSQALVPHQPISLSPAAVEEVIAAFDAEGTVD
SHEADLTLSADEQNQQLLDALLQTQPENVSPMALKPTVQSQAFQSLISKGEQPTPLSDSVPVSLSTPERSLVQNESLFPL
LRNGPSASQVQIDSPVQIGSPVQIGSPVQIGSPVQIDSPVQIDSPVQIDSHVQINSPLQIGSPVLNGSHETSTASRIDSP
LTLANNREEWPQQLRMALGERLQVYG

Specific function: Unknown

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28348; Mature: 28348

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLNTTTLNTLSQITDSFAPTKEEIKVPVTARSEGVSVSNLANFDAVLSQALVPHQPIS
CEEECCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
LSPAAVEEVIAAFDAEGTVDSHEADLTLSADEQNQQLLDALLQTQPENVSPMALKPTVQS
CCHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCHHH
QAFQSLISKGEQPTPLSDSVPVSLSTPERSLVQNESLFPLLRNGPSASQVQIDSPVQIGS
HHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHCCCCCCHHHHCCCCCCEEEECCCCCCCC
PVQIGSPVQIGSPVQIDSPVQIDSPVQIDSHVQINSPLQIGSPVLNGSHETSTASRIDSP
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCCCCHHHHHCCCC
LTLANNREEWPQQLRMALGERLQVYG
EEECCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MITLNTTTLNTLSQITDSFAPTKEEIKVPVTARSEGVSVSNLANFDAVLSQALVPHQPIS
CEEECCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
LSPAAVEEVIAAFDAEGTVDSHEADLTLSADEQNQQLLDALLQTQPENVSPMALKPTVQS
CCHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCHHH
QAFQSLISKGEQPTPLSDSVPVSLSTPERSLVQNESLFPLLRNGPSASQVQIDSPVQIGS
HHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHCCCCCCHHHHCCCCCCEEEECCCCCCCC
PVQIGSPVQIGSPVQIDSPVQIDSPVQIDSHVQINSPLQIGSPVLNGSHETSTASRIDSP
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCCCCCCCCCCCCCCHHHHHCCCC
LTLANNREEWPQQLRMALGERLQVYG
EEECCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA