| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022880
Identifier: 170022880
GI number: 170022880
Start: 687458
End: 687979
Strand: Direct
Name: 170022880
Synonym: YPK_0629
Alternate gene names: NA
Gene position: 687458-687979 (Clockwise)
Preceding gene: 170022879
Following gene: 170022881
Centisome position: 14.66
GC content: 50.96
Gene sequence:
>522_bases ATGAGTTATCAGCACTTATTCCCACAAGCTACAGCCCATACCGAGAATCGTCTCAGTGGCAGCCTGTTACGACTACAGCG GCTATCACAGTCTGCACAGGCTCAAGATGAGCAGGAAAGGGCGAGTGTAGTGGTCTCCCGTCACTCTAATGCCCACTGGA TAGCATCCAGCCCCGAGGCTAAAAACAATCCGATACTGGCACTCAAACTGATTAAGCGCCGAACACCGCACGAAGAGGCT ATTGATACGTTGCAAGTTAGTGCACGACACCTGAGTAAATTCACCAAGCGCAAGATGATTGCGGTCTGTGCTGGCTGGGA ATGCCTGGATACTGAAGACCGGAATATGGAGGCATTCACCTACAGCATGACCCACAGTGACGATAACGGCTATCACGCTG GTTTCTTTGCTGCTCAGAGAGTTCTTGAGAAACATGTGGAGCTGTGGACTGAGGAAGATATCAGGTCATTGTCTGAACGG TATGGAGTGGCAACACAGAGTGAGCGGGGAATGGCAGGTTGA
Upstream 100 bases:
>100_bases TGCGCCACACGGTGAAGTTACCAGCATTAAAGCGAATCTTGATGCGGGAATGAGTCCAGCAGCGTTAACTCGCCCCTAAG TCGAGCCGGGAGCCATTAGC
Downstream 100 bases:
>100_bases TGGACCTCGGAATTTTTTGGGTCCCTCCTGGCAACATTTATTACACGGGACATTGCGCGCCGTGCAGTTTCCCTAGCTAT AACTTTTTGAATTTGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSYQHLFPQATAHTENRLSGSLLRLQRLSQSAQAQDEQERASVVVSRHSNAHWIASSPEAKNNPILALKLIKRRTPHEEA IDTLQVSARHLSKFTKRKMIAVCAGWECLDTEDRNMEAFTYSMTHSDDNGYHAGFFAAQRVLEKHVELWTEEDIRSLSER YGVATQSERGMAG
Sequences:
>Translated_173_residues MSYQHLFPQATAHTENRLSGSLLRLQRLSQSAQAQDEQERASVVVSRHSNAHWIASSPEAKNNPILALKLIKRRTPHEEA IDTLQVSARHLSKFTKRKMIAVCAGWECLDTEDRNMEAFTYSMTHSDDNGYHAGFFAAQRVLEKHVELWTEEDIRSLSER YGVATQSERGMAG >Mature_172_residues SYQHLFPQATAHTENRLSGSLLRLQRLSQSAQAQDEQERASVVVSRHSNAHWIASSPEAKNNPILALKLIKRRTPHEEAI DTLQVSARHLSKFTKRKMIAVCAGWECLDTEDRNMEAFTYSMTHSDDNGYHAGFFAAQRVLEKHVELWTEEDIRSLSERY GVATQSERGMAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19653; Mature: 19522
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQHLFPQATAHTENRLSGSLLRLQRLSQSAQAQDEQERASVVVSRHSNAHWIASSPEA CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCC KNNPILALKLIKRRTPHEEAIDTLQVSARHLSKFTKRKMIAVCAGWECLDTEDRNMEAFT CCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEE YSMTHSDDNGYHAGFFAAQRVLEKHVELWTEEDIRSLSERYGVATQSERGMAG EEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SYQHLFPQATAHTENRLSGSLLRLQRLSQSAQAQDEQERASVVVSRHSNAHWIASSPEA CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCC KNNPILALKLIKRRTPHEEAIDTLQVSARHLSKFTKRKMIAVCAGWECLDTEDRNMEAFT CCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEE YSMTHSDDNGYHAGFFAAQRVLEKHVELWTEEDIRSLSERYGVATQSERGMAG EEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA