| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170022835
Identifier: 170022835
GI number: 170022835
Start: 644344
End: 645339
Strand: Reverse
Name: 170022835
Synonym: YPK_0584
Alternate gene names: NA
Gene position: 645339-644344 (Counterclockwise)
Preceding gene: 170022836
Following gene: 170022834
Centisome position: 13.76
GC content: 48.49
Gene sequence:
>996_bases ATGAAGAGATTGTTACTGTCGGCGCTGTTGATCACCCCTGGCACGTTGCTGGCAGCCGATGCTCAGGAGCTCCCGCTGCT CAGTGGCGGTGATACGCCGACCATCAAGAACTCCAACCTCGATTTGTTCGGCGTTTCCAGAGACTTCGGCGATATTATAT TTATCGACGATGACCGGACAGTGAACGATTCCGCGCCGAAAAGAACCCGCGTTTTTACCGGGTATGAGTATGAAAATATC AAGTTCTCCAATCACCCGGCGCAACTGTATAGCACACTGGTGTTCGCTGACGGCTCGACCAAGATTACCGACAGTTTTAG CATGGGTTATGTGCTACGTGAGACCACGATTTACGACGGCCCACGTAATAATGCATTTGCCGGCTCCGATAAATCGCGCC GTGACTCTTTTATGGAAATTCAGTTGCTGCCGAAATATATCAACTGGGTTAACGAGAATTTGAGTTACGGTGCCGAATTG GGTTACGAGCGTTTTACTGATGCCAAAGATGCGCCAGAAAAGCAGATGTACCATATTCGCCCTGAGATCAATCTGGGATT TGGCCGTAATTTCCTGCATCTCAATGCCGAGTTGGGCTGGATAGACAGAACTGACCGCGGCGCTTATATCGAAACCGAAC CACTGTATCTCTACCGCGTTACCGATAACTTTAACATTGGCGCAAAGGCCTATTACCACGCTGAAGATAACGACTATCGC TGGCGCGAGACGGCAATTCGCCCGTTGATACAGTATCGCTTCGCCAACAGTACCTATCTGGAACTGCGCTGGGAGATCGG TGGTATTCGTACTCATGACGGCAGTGGTTATAACTACAACAATTACGGTTTATATACCGAAATCCCCTTCAACCCGACGA TATCCTTTATGGCCGACCTGCAATATAAGGATCAAAAACAGCATCGGGGTAATGAATGGTCGTGGGGCGATAAAGAAGAT ATTTTCGCCAAAGTCGGCTTTATCCTTAATTTCTAA
Upstream 100 bases:
>100_bases GACTACCGACACCTAATTACCCTAATGCCACCTCTCGGTTCACCAGAGTAGAGGATGGCATTGCCCCCCATTTCGCGATG ATAGAATAAGGATTACAGGC
Downstream 100 bases:
>100_bases GCGGCCACATCCTTTTACTAACGATAAAAAATATTGGGCTAATATTTAGGGAATGACCTATGAATAACCATAAGATCTGG CGTTTATCCGCCGTTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKRLLLSALLITPGTLLAADAQELPLLSGGDTPTIKNSNLDLFGVSRDFGDIIFIDDDRTVNDSAPKRTRVFTGYEYENI KFSNHPAQLYSTLVFADGSTKITDSFSMGYVLRETTIYDGPRNNAFAGSDKSRRDSFMEIQLLPKYINWVNENLSYGAEL GYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYHAEDNDYR WRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEWSWGDKED IFAKVGFILNF
Sequences:
>Translated_331_residues MKRLLLSALLITPGTLLAADAQELPLLSGGDTPTIKNSNLDLFGVSRDFGDIIFIDDDRTVNDSAPKRTRVFTGYEYENI KFSNHPAQLYSTLVFADGSTKITDSFSMGYVLRETTIYDGPRNNAFAGSDKSRRDSFMEIQLLPKYINWVNENLSYGAEL GYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYHAEDNDYR WRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEWSWGDKED IFAKVGFILNF >Mature_331_residues MKRLLLSALLITPGTLLAADAQELPLLSGGDTPTIKNSNLDLFGVSRDFGDIIFIDDDRTVNDSAPKRTRVFTGYEYENI KFSNHPAQLYSTLVFADGSTKITDSFSMGYVLRETTIYDGPRNNAFAGSDKSRRDSFMEIQLLPKYINWVNENLSYGAEL GYERFTDAKDAPEKQMYHIRPEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYHAEDNDYR WRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADLQYKDQKQHRGNEWSWGDKED IFAKVGFILNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38231; Mature: 38231
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLSALLITPGTLLAADAQELPLLSGGDTPTIKNSNLDLFGVSRDFGDIIFIDDDRT CHHHHHHHHHHCCCEEEECCHHHCCEECCCCCCCEECCCEEEEEECCCCCCEEEEECCCC VNDSAPKRTRVFTGYEYENIKFSNHPAQLYSTLVFADGSTKITDSFSMGYVLRETTIYDG CCCCCCCCEEEEECEEECCEEECCCHHHEEEEEEEECCCCEEECCCCCCEEEEEEEEECC PRNNAFAGSDKSRRDSFMEIQLLPKYINWVNENLSYGAELGYERFTDAKDAPEKQMYHIR CCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCCEEEEC PEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYHAEDNDYR CCEEECCCCCEEEEECEECEEEECCCCCEEECCCEEEEEEECCCCCCCEEEEECCCCCCC WRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADL HHHHHHHHHHHEEECCCEEEEEEEEECCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEC QYKDQKQHRGNEWSWGDKEDIFAKVGFILNF CCCHHHHHCCCCCCCCCHHHHHEEEEEEECC >Mature Secondary Structure MKRLLLSALLITPGTLLAADAQELPLLSGGDTPTIKNSNLDLFGVSRDFGDIIFIDDDRT CHHHHHHHHHHCCCEEEECCHHHCCEECCCCCCCEECCCEEEEEECCCCCCEEEEECCCC VNDSAPKRTRVFTGYEYENIKFSNHPAQLYSTLVFADGSTKITDSFSMGYVLRETTIYDG CCCCCCCCEEEEECEEECCEEECCCHHHEEEEEEEECCCCEEECCCCCCEEEEEEEEECC PRNNAFAGSDKSRRDSFMEIQLLPKYINWVNENLSYGAELGYERFTDAKDAPEKQMYHIR CCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCCEEEEC PEINLGFGRNFLHLNAELGWIDRTDRGAYIETEPLYLYRVTDNFNIGAKAYYHAEDNDYR CCEEECCCCCEEEEECEECEEEECCCCCEEECCCEEEEEEECCCCCCCEEEEECCCCCCC WRETAIRPLIQYRFANSTYLELRWEIGGIRTHDGSGYNYNNYGLYTEIPFNPTISFMADL HHHHHHHHHHHEEECCCEEEEEEEEECCEEECCCCCCCCCCCEEEEECCCCCCEEEEEEC QYKDQKQHRGNEWSWGDKEDIFAKVGFILNF CCCHHHHHCCCCCCCCCHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA