| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022834
Identifier: 170022834
GI number: 170022834
Start: 641999
End: 644284
Strand: Reverse
Name: 170022834
Synonym: YPK_0583
Alternate gene names: NA
Gene position: 644284-641999 (Counterclockwise)
Preceding gene: 170022835
Following gene: 170022821
Centisome position: 13.74
GC content: 54.77
Gene sequence:
>2286_bases ATGAATAACCATAAGATCTGGCGTTTATCCGCCGTTGCTGTTGCTTTACTGATTAGCGGTAATGGCTATGCCGATCAGAC CTTCCACTTCGCTCAGCAACCGCATAACACGGGCGATCATACTGTGATCGCCGCACCAGAGGTCAATAACTTTTCATTGG CAGATCTGACCGCCAACGCAGAAGGGCAAGCAGTGGATGCGACCAACGCAGGCGCACTGTCGCTGCGGGTTGAACCCACT CAAGGTGACGCTCAGGCGAATGGCGTACTGGTCACCTCCGGCACCTTTACTAATCAGGCTCAGGGCTCGATCACCGTGAG TGCCAGCAGTCAGGATCAACATGCTGTTGCCAGCGGGTTGCAGGCAACGGATGCCTATTGGTCCACTCTGCGTAATCAGG GTAGCATCCGTGCCACGAGCAACAGCCTACACGGCAGTGCCGAGGCCTATGGTATCCAGGCTGGCCTGGCCTTTTCCGAT GCCGCCGGGGATCACTACGGTGACCACATGATGTTGAGCAACGAGGGGGTGATGCAGGTGAGTGCCACGGCCGAGCAGGA CGCCTTTGCCAGCGGTATCTATACCAATGCCGGTAATGGCGTGGTCAACAATGGGCGTCTGGATGTCAGTGCTCATGCCA GTGCTGGCGATGCGCGGGCAACCGGCCTGCATACCCTCTCTGCCAACCCAGGCGTCGATCCCGATCCATGGAACCCCGCT AACCCCACTCATCTGATGAGCAACAATGGCTCGTTGTCAGTCACGGCCAGCGGTAACAATGCGACCGCAAGCGCGATCAG TACCGAGGGCGAAGGGGTCTACATCTACAACAACGGGACACTGATCGTTGATGCATTTAGCGAGAGTGCGCAGGGCAGTG CATCCGCCTATGGTATTCATGTGCTCAACGGCAGTGCCACGATCAACTCCAGCGGCAGAATTTTGGCGACAGCCACCGGC GGAAGCCAACAGCAAGCCTATGAAGTGATGGCTGACGGTTCGGTAGTTAATATTGAACGCTATACACTCGCCTTGGGCGA TGAGACACCGTGGGCGGTCAGTAATGGCGGTTCGATCGTGCTGGGTAACGGTACGCAAGGGGCCGATCTGGTGCTAATGG CTGGGCAGGCCAGTGAAGGTTTCGCCTATGGTAAAGAGTACAGCTTGGACAATCTGGCTTACGATACCACCTCCGGCCAG CAGAGTACGGTGGGGGGTTCTATTGCGGGGTTGTACGGTATTACGCCTGATATCAAGGTGATTCACAGCGGTAGCAGCAG TAGTTCGTTGGGATCTGCTGCACTGGTGTATGCACCGGATGTCTCTCATGCCGGAGTCTCCGCATTGGCACAGCGTTCTT CCATGGAGCAGGCATCCAATATTATCTCCTCGCAACTGCATAGTCAGTTGGTAAGTAACGCCGGTTGTAACCAGAAGTTG GAGAGTGCCGATAGCTGCGTCTTTATCACACCTTATGCTGGTGAGTACCGTCGTGATCCAGTGACCTCCGGTTACAGCGG TCAGCGCTATGGGGTATTGCTCGGTCAGAACCAACATTTTGGCGATTTCCAGCTTGGCTGGCACGGCGGTTATGAGAGTG CCAGCACCGATTTTAATGGTACCTCTGTAGGGCGTAAGGAAGAGATCAATACGCTGATGCTGGGGGTTCAGGGCGGAATG AAGCTCTCTGAGAGTCTGTTTATTGCAGCGACCAGTACGTGGTTCAGCAGTGACACCGATTACAGTGACAGCAATACCTA CTACGGCGTGGGTAGCCAGAGCGGCAGCTATGATAGCAGCGGCCTCTACACCGATGTCTCCGTGGGTAATAGCTGGCAGT TGAATCGCAACTATGCCATGACGCCGATGGTCGGGCTGACGCATATCTGGCAGCAACGCGATGGCTATATTGTCTCATCC AATAACAGCAACTATGATCTTATCGACACCCGCTATAGCAGCTACAGCAACCATGCAGTCGCTCTCCATGCTGGAGTACG TCTCGATGGTCGCTATCCACTGACCAACGAGACACTGCTAAAGCCGTTCTTTAATGTCGGATTGCAGCAAATGTTGTATG GCGATGAGATCACCATCGATCAGAGTATCCCTAATTCGCCGGTAGTTGGCGTAAGCACCAAGGATAAAACCACTCAAGGA ACCTTCGATCTGGGGATGGCACTGGTAAGCGATAACGGTGTGTCTGCCAGCCTACAGCTATCGGGCATGGTCAATAGTGA TCGTCAGGATTTCACCGGCTGGGCAAATCTGGGCTGGGCGTTCTAG
Upstream 100 bases:
>100_bases AAGATATTTTCGCCAAAGTCGGCTTTATCCTTAATTTCTAAGCGGCCACATCCTTTTACTAACGATAAAAAATATTGGGC TAATATTTAGGGAATGACCT
Downstream 100 bases:
>100_bases AGGGGCAGTTGCGTTAAGATGCTGTCGTATAACATGCAGTTCAGCATCTTAGGCCGCTGACGGCATTCCTACCGCTGTAC TCCGAGTGCAGCGGTAGGAG
Product: outer membrane autotransporter
Products: NA
Alternate protein names: Autotransporter Protein; Outer Membrane Autotransporter
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSD AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIHVLNGSATINSSGRILATATG GSQQQAYEVMADGSVVNIERYTLALGDETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSS NNSNYDLIDTRYSSYSNHAVALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
Sequences:
>Translated_761_residues MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSD AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIHVLNGSATINSSGRILATATG GSQQQAYEVMADGSVVNIERYTLALGDETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSS NNSNYDLIDTRYSSYSNHAVALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF >Mature_761_residues MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANAEGQAVDATNAGALSLRVEPT QGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGLQATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSD AAGDHYGDHMMLSNEGVMQVSATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIHVLNGSATINSSGRILATATG GSQQQAYEVMADGSVVNIERYTLALGDETPWAVSNGGSIVLGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQ QSTVGGSIAGLYGITPDIKVIHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNGTSVGRKEEINTLMLGVQGGM KLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSSGLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSS NNSNYDLIDTRYSSYSNHAVALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79497; Mature: 79497
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA CCCCEEEEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCEEEEEEECCC EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC QATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV HHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCCEEEE SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIH CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGDETPWAVSNGGSIV EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEECCCCEEE LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSSNNSNYDLIDTRYSSYSNHAV CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEE ALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG EEEECEEECCCCCCCCCHHHHHHHHHCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNHKIWRLSAVAVALLISGNGYADQTFHFAQQPHNTGDHTVIAAPEVNNFSLADLTANA CCCCEEEEEEEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCEEEEEEECCC EGQAVDATNAGALSLRVEPTQGDAQANGVLVTSGTFTNQAQGSITVSASSQDQHAVASGL CCCEEECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHCC QATDAYWSTLRNQGSIRATSNSLHGSAEAYGIQAGLAFSDAAGDHYGDHMMLSNEGVMQV HHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCCEEEE SATAEQDAFASGIYTNAGNGVVNNGRLDVSAHASAGDARATGLHTLSANPGVDPDPWNPA ECCCCCCHHHCCEEECCCCCEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCC NPTHLMSNNGSLSVTASGNNATASAISTEGEGVYIYNNGTLIVDAFSESAQGSASAYGIH CCCEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEE VLNGSATINSSGRILATATGGSQQQAYEVMADGSVVNIERYTLALGDETPWAVSNGGSIV EEECCEEECCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEEEECCCCCEEECCCCEEE LGNGTQGADLVLMAGQASEGFAYGKEYSLDNLAYDTTSGQQSTVGGSIAGLYGITPDIKV ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEE IHSGSSSSSLGSAALVYAPDVSHAGVSALAQRSSMEQASNIISSQLHSQLVSNAGCNQKL EECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ESADSCVFITPYAGEYRRDPVTSGYSGQRYGVLLGQNQHFGDFQLGWHGGYESASTDFNG HCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC TSVGRKEEINTLMLGVQGGMKLSESLFIAATSTWFSSDTDYSDSNTYYGVGSQSGSYDSS CCCCCHHCCEEEEEEECCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC GLYTDVSVGNSWQLNRNYAMTPMVGLTHIWQQRDGYIVSSNNSNYDLIDTRYSSYSNHAV CCEEEEECCCEEEECCCEECCCHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEE ALHAGVRLDGRYPLTNETLLKPFFNVGLQQMLYGDEITIDQSIPNSPVVGVSTKDKTTQG EEEECEEECCCCCCCCCHHHHHHHHHCHHHHHCCCEEEEECCCCCCCEEEECCCCCCCCC TFDLGMALVSDNGVSASLQLSGMVNSDRQDFTGWANLGWAF CCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA