Click here to switch to the map view.

The map label for this gene is 170022477

Identifier: 170022477

GI number: 170022477

Start: 252995

End: 255049

Strand: Reverse

Name: 170022477

Synonym: YPK_0216

Alternate gene names: NA

Gene position: 255049-252995 (Counterclockwise)

Preceding gene: 170022478

Following gene: 170022476

Centisome position: 5.44

GC content: 50.32

Gene sequence:

>2055_bases
ATGTTTCTTTCTGTGAATGAGCTGATTGGGTTACCGGGTATGCCTGGGACTGCTCCGGGTATTAGGGCTGCGCTTAACAA
GCGCGCGGGTAGTTCACTGGAATTGAAACGTAAACGCGCTGGTACCAAGGCATTTGAATACCATATTGATTGCCTCACAG
AGCAGCAACAAAACGTTGTTCGTGAGCGCCACCTTAACTCTCTTTTAAATGCAGAGAAAAAAGCCGTTAAAACGGCATTT
AACGGCGATTTAAACCCAAGGGTAAAAGCCAAGCATGAATTAGACCTTATGCGCCAATGTCCCGCCCTGTTGGAACGCAG
CACCGGGAGTCTGACCAAGTTACAGCGTGATATCGCGGATGCTCGCGCCACTTTGGTGACCGAGGTTATCAATTTACAGA
ACGCCGGATTGTCCCGCATTCGGGCCATTAATTATATTTGTGACCAGTCACGTTCTAATAATTTGCCTGAGAACTTGCAG
AAAGCAGCCGCGATGGCCAATGCCCGTAAAGGTCTGCGCACAGGCGTCAGTACCCGCACCCTGAATGGTTGGGTTGTTGA
CTATGAACGTGCCGCCACGCCCTCTGAGCGTCTGGTTTTATTGGCTCCAGGGCACAATAAAGGCAAACCCGTTGAGCGCA
TTAAATGGATGCCACTATTTATGGCGCACTACCGCACCACCAACGGATTAAGCATTGCTGAGGCTTACGAGAACTTTGAG
CATGACTGGCAAATGCAGTATGCAGACCAGCCCGCCATGCTCGCCGCAATTCCTTCTGTCTATGCCGTGCGGCGGGCATT
AGACAAGTTGCCAACCGTCGTTAAACAACGTGGCCGTGTTACGGGTTCTGCCATGCGAGCGCTGAATACTTATGTGAAGC
GTGACTGGTCACAAATGCCCGTTAATGGCGTTTGGATTGGGGATGGCCACAGTATGAAAATGAAGGTGGCACACCCTGAC
CATGGTCGTCCATTTACCCCCGAAATCACGCTGGTTATTGATGGCCGGACACGCTATGTCGTCGGCTGGAGCCTGAGCCT
GGCTGAGAACGTGATCGCTGTGGCTGATGCACTGCGCCACGGTATGCAGAGTCACGGCATACCCCTGATTTACTATTCAG
ATAACGGTGCAGGTCAAACCGCAAACGTATTAGATGCTGATATTACGGGGATTTTATCGCGTCTTGGTGTGGAACACCCC
ACCGGTATCCCCGGTAACCCGCAGGCACGTGGGATTATTGAGCGGCTTAACCGCGAAATTCCTGCCCGTATCGCCCGTAA
ATTTGCCACCTATAACGGTAAATCTGCTGACCGCGAAACGGTTCGTATGGTCAGCGTTGACCTTAATTCAGCCTTCAATG
CACAGGGGAAGAATAAAGAGCTCAGCAGTCGCCAAAAGGCGGCGATGGCTAAATTACCCTCATGGCAGCAGCTTATCGAT
GCCATAGAAGATGAAATTGAAGCCTATAACACCACTCACCGTCACAGTGAATTACCCCGCCGTGACGATGGTAAACACTA
TACCGCTACGGAGTACCGCCAGTTATTGCTGGCCAGCGAGACCATTGATCGCCTTTCCGATATCGAGTTGCGCGACATGT
TCCGTCCGCAAGTCAAACGTACCGCCCAGCGCGGTTGGCTGTCTATCTTCAATAACCAATATTTTGCTGAGGGTTTAATT
CAGGTCGATGGCGAAGAAGTTCTGGTTGAGTTCGATATTCACGATGCCAGCAGCGTTACCGTTCGCCGCCTTGATGGCTC
GTTTATCTGTACTGCGATTGTGAATGGTAATACCCGCGCCGCCTTCCCTGTCGATTACGTCCAGAAAGTGGCAAAAGACC
GCCATAGCCGCCGTATGAAACTGGTTGAACAAAAAGCCGAAGAGATTAATGCCGAGCTTAATCCAGTATTAACCGTTGAT
AGTGCGCCTGACTTTGGCTCACTGATTCAGGGTGATATCTCACGCATTAATGATGACCGGGAAGAGATGTTTTTATTCCA
ATCTGATCGCGATGAATATTTAAAAACACACGGTAATAAAAAAGCGGCGATTTGA

Upstream 100 bases:

>100_bases
TACCCAAAAGGGGAAAAAATCATTGCCCAGGCATTGGGTTTAGAACCAGCAAATATTTGGCCGAGTCGCTACCCCGCTTT
AACTCGCAGGGTGGCTTAAC

Downstream 100 bases:

>100_bases
CGCCCATCAAATGCCGCTCATTCACTACATAGGAATTAAATCATGACAATTAAAAATGACCTTATAGAACTGATGGAACG
TAAAAGCCTCAACCAAACAC

Product: transposase

Products: NA

Alternate protein names: Transposase; Transposase-Like Mu; Bacteriophage Transposase; Transposase A; Bacteriophage Transposase A Protein; Integrase Catalytic Subunit; Integrase Catalytic Region; Transposase/Recombinase; Phage Transposition Protein

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MFLSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVVRERHLNSLLNAEKKAVKTAF
NGDLNPRVKAKHELDLMRQCPALLERSTGSLTKLQRDIADARATLVTEVINLQNAGLSRIRAINYICDQSRSNNLPENLQ
KAAAMANARKGLRTGVSTRTLNGWVVDYERAATPSERLVLLAPGHNKGKPVERIKWMPLFMAHYRTTNGLSIAEAYENFE
HDWQMQYADQPAMLAAIPSVYAVRRALDKLPTVVKQRGRVTGSAMRALNTYVKRDWSQMPVNGVWIGDGHSMKMKVAHPD
HGRPFTPEITLVIDGRTRYVVGWSLSLAENVIAVADALRHGMQSHGIPLIYYSDNGAGQTANVLDADITGILSRLGVEHP
TGIPGNPQARGIIERLNREIPARIARKFATYNGKSADRETVRMVSVDLNSAFNAQGKNKELSSRQKAAMAKLPSWQQLID
AIEDEIEAYNTTHRHSELPRRDDGKHYTATEYRQLLLASETIDRLSDIELRDMFRPQVKRTAQRGWLSIFNNQYFAEGLI
QVDGEEVLVEFDIHDASSVTVRRLDGSFICTAIVNGNTRAAFPVDYVQKVAKDRHSRRMKLVEQKAEEINAELNPVLTVD
SAPDFGSLIQGDISRINDDREEMFLFQSDRDEYLKTHGNKKAAI

Sequences:

>Translated_684_residues
MFLSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVVRERHLNSLLNAEKKAVKTAF
NGDLNPRVKAKHELDLMRQCPALLERSTGSLTKLQRDIADARATLVTEVINLQNAGLSRIRAINYICDQSRSNNLPENLQ
KAAAMANARKGLRTGVSTRTLNGWVVDYERAATPSERLVLLAPGHNKGKPVERIKWMPLFMAHYRTTNGLSIAEAYENFE
HDWQMQYADQPAMLAAIPSVYAVRRALDKLPTVVKQRGRVTGSAMRALNTYVKRDWSQMPVNGVWIGDGHSMKMKVAHPD
HGRPFTPEITLVIDGRTRYVVGWSLSLAENVIAVADALRHGMQSHGIPLIYYSDNGAGQTANVLDADITGILSRLGVEHP
TGIPGNPQARGIIERLNREIPARIARKFATYNGKSADRETVRMVSVDLNSAFNAQGKNKELSSRQKAAMAKLPSWQQLID
AIEDEIEAYNTTHRHSELPRRDDGKHYTATEYRQLLLASETIDRLSDIELRDMFRPQVKRTAQRGWLSIFNNQYFAEGLI
QVDGEEVLVEFDIHDASSVTVRRLDGSFICTAIVNGNTRAAFPVDYVQKVAKDRHSRRMKLVEQKAEEINAELNPVLTVD
SAPDFGSLIQGDISRINDDREEMFLFQSDRDEYLKTHGNKKAAI
>Mature_684_residues
MFLSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVVRERHLNSLLNAEKKAVKTAF
NGDLNPRVKAKHELDLMRQCPALLERSTGSLTKLQRDIADARATLVTEVINLQNAGLSRIRAINYICDQSRSNNLPENLQ
KAAAMANARKGLRTGVSTRTLNGWVVDYERAATPSERLVLLAPGHNKGKPVERIKWMPLFMAHYRTTNGLSIAEAYENFE
HDWQMQYADQPAMLAAIPSVYAVRRALDKLPTVVKQRGRVTGSAMRALNTYVKRDWSQMPVNGVWIGDGHSMKMKVAHPD
HGRPFTPEITLVIDGRTRYVVGWSLSLAENVIAVADALRHGMQSHGIPLIYYSDNGAGQTANVLDADITGILSRLGVEHP
TGIPGNPQARGIIERLNREIPARIARKFATYNGKSADRETVRMVSVDLNSAFNAQGKNKELSSRQKAAMAKLPSWQQLID
AIEDEIEAYNTTHRHSELPRRDDGKHYTATEYRQLLLASETIDRLSDIELRDMFRPQVKRTAQRGWLSIFNNQYFAEGLI
QVDGEEVLVEFDIHDASSVTVRRLDGSFICTAIVNGNTRAAFPVDYVQKVAKDRHSRRMKLVEQKAEEINAELNPVLTVD
SAPDFGSLIQGDISRINDDREEMFLFQSDRDEYLKTHGNKKAAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76588; Mature: 76588

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVV
CEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RERHLNSLLNAEKKAVKTAFNGDLNPRVKAKHELDLMRQCPALLERSTGSLTKLQRDIAD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHCCCCHHHHHHHHHHH
ARATLVTEVINLQNAGLSRIRAINYICDQSRSNNLPENLQKAAAMANARKGLRTGVSTRT
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LNGWVVDYERAATPSERLVLLAPGHNKGKPVERIKWMPLFMAHYRTTNGLSIAEAYENFE
CCCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
HDWQMQYADQPAMLAAIPSVYAVRRALDKLPTVVKQRGRVTGSAMRALNTYVKRDWSQMP
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCC
VNGVWIGDGHSMKMKVAHPDHGRPFTPEITLVIDGRTRYVVGWSLSLAENVIAVADALRH
CCEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHH
GMQSHGIPLIYYSDNGAGQTANVLDADITGILSRLGVEHPTGIPGNPQARGIIERLNREI
HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHH
PARIARKFATYNGKSADRETVRMVSVDLNSAFNAQGKNKELSSRQKAAMAKLPSWQQLID
HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
AIEDEIEAYNTTHRHSELPRRDDGKHYTATEYRQLLLASETIDRLSDIELRDMFRPQVKR
HHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TAQRGWLSIFNNQYFAEGLIQVDGEEVLVEFDIHDASSVTVRRLDGSFICTAIVNGNTRA
HHHHHHHHHHCCCHHHCCCEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCE
AFPVDYVQKVAKDRHSRRMKLVEQKAEEINAELNPVLTVDSAPDFGSLIQGDISRINDDR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCH
EEMFLFQSDRDEYLKTHGNKKAAI
HHEEEECCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFLSVNELIGLPGMPGTAPGIRAALNKRAGSSLELKRKRAGTKAFEYHIDCLTEQQQNVV
CEEEHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RERHLNSLLNAEKKAVKTAFNGDLNPRVKAKHELDLMRQCPALLERSTGSLTKLQRDIAD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHCCCCHHHHHHHHHHH
ARATLVTEVINLQNAGLSRIRAINYICDQSRSNNLPENLQKAAAMANARKGLRTGVSTRT
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LNGWVVDYERAATPSERLVLLAPGHNKGKPVERIKWMPLFMAHYRTTNGLSIAEAYENFE
CCCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
HDWQMQYADQPAMLAAIPSVYAVRRALDKLPTVVKQRGRVTGSAMRALNTYVKRDWSQMP
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCC
VNGVWIGDGHSMKMKVAHPDHGRPFTPEITLVIDGRTRYVVGWSLSLAENVIAVADALRH
CCEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHH
GMQSHGIPLIYYSDNGAGQTANVLDADITGILSRLGVEHPTGIPGNPQARGIIERLNREI
HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHH
PARIARKFATYNGKSADRETVRMVSVDLNSAFNAQGKNKELSSRQKAAMAKLPSWQQLID
HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
AIEDEIEAYNTTHRHSELPRRDDGKHYTATEYRQLLLASETIDRLSDIELRDMFRPQVKR
HHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TAQRGWLSIFNNQYFAEGLIQVDGEEVLVEFDIHDASSVTVRRLDGSFICTAIVNGNTRA
HHHHHHHHHHCCCHHHCCCEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCE
AFPVDYVQKVAKDRHSRRMKLVEQKAEEINAELNPVLTVDSAPDFGSLIQGDISRINDDR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCH
EEMFLFQSDRDEYLKTHGNKKAAI
HHEEEECCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA