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The map label for this gene is 170022476

Identifier: 170022476

GI number: 170022476

Start: 252062

End: 252952

Strand: Reverse

Name: 170022476

Synonym: YPK_0215

Alternate gene names: NA

Gene position: 252952-252062 (Counterclockwise)

Preceding gene: 170022477

Following gene: 170022475

Centisome position: 5.39

GC content: 48.93

Gene sequence:

>891_bases
ATGACAATTAAAAATGACCTTATAGAACTGATGGAACGTAAAAGCCTCAACCAAACACAGGTTTCACGCGCTATCGGTAT
GAGTACTGCCACCGTCAATCAATATCTACAAGATAAATATAACGGGGATTTGGACAGGGTCAATAGTGAGGTACAGGCTT
TCCTCGAACGCACTCGCGAGAAAGATAAAGCCCAGCGCGTAGACGTGAAGTTTGTTGCAACGTCAGCATCCAAAAAAGCG
CTGGAAATTATCCGTATGGCCCACGTTGACGGTGAGATCAATGTGATTTACGGCGAGGCCGGGCTAGGTAAAACCATGGC
ATTAAAGGCTTACGCCAGCCAGAACTCAACTGCGCTGTTAATCGAAGTTGACCCCAGCTTTACCGCTCGCGTCTTACTGG
AAGAAATCTGTAACCGTTTGGGGCTATCCCCTCGCGGCAACATGCATGAAACCTTTGAGTTATGTACCAATAAATTACGT
GATTCGGGCTATGTCTTGTTGATTGACGAGGGGGAGTTGCTGCCACATCGGTCACTGGAAGTGCTGCGCCGCCTGCACGA
TAAAAGCGGTATCGGCGTTGTCCTGGTTGGTATGCCGCGACTGTTGATTAACCTGAAAGGTAAGCGTGGCGAATTCGTCC
AACTTTATAGCCGTGTGGCTTTTGCGCTCAATATCGGTAATGCCCTGCCTAAAGATGATGTCAGTGCCATTGCGGCCAGT
GTGTTACCTGCGGTAGCAGATGATATCAATGAGGCGCTTTATCAGGAATCAAAAGGCAATGCCCGCCGCTTATTTAAGTT
ACTGCGCGGTGCAATTCGCCTTAGCCATATCAATGAAACACCCATGGGTGTCGGTGCCGTTCGCCAAGCCGCCAAGCCGC
CAAAATGTTAA

Upstream 100 bases:

>100_bases
CCAATCTGATCGCGATGAATATTTAAAAACACACGGTAATAAAAAAGCGGCGATTTGACGCCCATCAAATGCCGCTCATT
CACTACATAGGAATTAAATC

Downstream 100 bases:

>100_bases
TTAATTAAGGAATAAGCCATGTGCCAATTACCTATTAATAACCCGACCTTAATGAAGCCTATTAATCGCTTATTACGCGC
CGGTATTAAAGTGGTGGAAT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTIKNDLIELMERKSLNQTQVSRAIGMSTATVNQYLQDKYNGDLDRVNSEVQAFLERTREKDKAQRVDVKFVATSASKKA
LEIIRMAHVDGEINVIYGEAGLGKTMALKAYASQNSTALLIEVDPSFTARVLLEEICNRLGLSPRGNMHETFELCTNKLR
DSGYVLLIDEGELLPHRSLEVLRRLHDKSGIGVVLVGMPRLLINLKGKRGEFVQLYSRVAFALNIGNALPKDDVSAIAAS
VLPAVADDINEALYQESKGNARRLFKLLRGAIRLSHINETPMGVGAVRQAAKPPKC

Sequences:

>Translated_296_residues
MTIKNDLIELMERKSLNQTQVSRAIGMSTATVNQYLQDKYNGDLDRVNSEVQAFLERTREKDKAQRVDVKFVATSASKKA
LEIIRMAHVDGEINVIYGEAGLGKTMALKAYASQNSTALLIEVDPSFTARVLLEEICNRLGLSPRGNMHETFELCTNKLR
DSGYVLLIDEGELLPHRSLEVLRRLHDKSGIGVVLVGMPRLLINLKGKRGEFVQLYSRVAFALNIGNALPKDDVSAIAAS
VLPAVADDINEALYQESKGNARRLFKLLRGAIRLSHINETPMGVGAVRQAAKPPKC
>Mature_295_residues
TIKNDLIELMERKSLNQTQVSRAIGMSTATVNQYLQDKYNGDLDRVNSEVQAFLERTREKDKAQRVDVKFVATSASKKAL
EIIRMAHVDGEINVIYGEAGLGKTMALKAYASQNSTALLIEVDPSFTARVLLEEICNRLGLSPRGNMHETFELCTNKLRD
SGYVLLIDEGELLPHRSLEVLRRLHDKSGIGVVLVGMPRLLINLKGKRGEFVQLYSRVAFALNIGNALPKDDVSAIAASV
LPAVADDINEALYQESKGNARRLFKLLRGAIRLSHINETPMGVGAVRQAAKPPKC

Specific function: This protein is a non-specific DNA-binding and ATP- hydrolyzing protein essential for bacteriophage integration and replication [H]

COG id: COG2842

COG function: function code R; Uncharacterized ATPase, putative transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009084
- InterPro:   IPR001387 [H]

Pfam domain/function: PF09077 Phage-MuB_C [H]

EC number: NA

Molecular weight: Translated: 32699; Mature: 32568

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKNDLIELMERKSLNQTQVSRAIGMSTATVNQYLQDKYNGDLDRVNSEVQAFLERTRE
CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KDKAQRVDVKFVATSASKKALEIIRMAHVDGEINVIYGEAGLGKTMALKAYASQNSTALL
HHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEEE
IEVDPSFTARVLLEEICNRLGLSPRGNMHETFELCTNKLRDSGYVLLIDEGELLPHRSLE
EEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
VLRRLHDKSGIGVVLVGMPRLLINLKGKRGEFVQLYSRVAFALNIGNALPKDDVSAIAAS
HHHHHHCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLPAVADDINEALYQESKGNARRLFKLLRGAIRLSHINETPMGVGAVRQAAKPPKC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
TIKNDLIELMERKSLNQTQVSRAIGMSTATVNQYLQDKYNGDLDRVNSEVQAFLERTRE
CCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KDKAQRVDVKFVATSASKKALEIIRMAHVDGEINVIYGEAGLGKTMALKAYASQNSTALL
HHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHEEEEECCCCCEEEE
IEVDPSFTARVLLEEICNRLGLSPRGNMHETFELCTNKLRDSGYVLLIDEGELLPHRSLE
EEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
VLRRLHDKSGIGVVLVGMPRLLINLKGKRGEFVQLYSRVAFALNIGNALPKDDVSAIAAS
HHHHHHCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLPAVADDINEALYQESKGNARRLFKLLRGAIRLSHINETPMGVGAVRQAAKPPKC
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]