| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is ymfQ [C]
Identifier: 170022445
GI number: 170022445
Start: 235750
End: 236319
Strand: Reverse
Name: ymfQ [C]
Synonym: YPK_0184
Alternate gene names: 170022445
Gene position: 236319-235750 (Counterclockwise)
Preceding gene: 170022446
Following gene: 170022444
Centisome position: 5.04
GC content: 46.49
Gene sequence:
>570_bases ATGACATTCTCAACTTTATTGGGCCTGCTATTACCGCCCGTTGCCTATGACTCTCAGCAGCCAAAAATCCATGCTGAAAT GCAGGCTGAAGGTAACGAACTTGATACCGCTTCACTGTTGGCTAATGCCGTGTTGGGGGGCGTCACACCCTTTTACGCGA ATAGCCTAATTGCTGATTGGGAGCGCGTTCTGGACATCACAGCAGAGCCGGAAGCCAGCTATCAGCAACGCTTACAAGTT GTCCTTATTAAGCTGTCAGAGTTCGGTGGACTCAGCATTCCCTATTTTAAACGCATTGCTGTCAGTGCTGGATATCAGAT AACCATTGATGAACTAGAGCCTTTCAGAGCGGGGGTTAATCGTGCAGGTGATGTGATCATGGCACCTGAAGTTATCTGGG TCTGGCGAGTGAATGTGTTCGGTTCAAAGACCCAAACATTCAGATTTAGAGCTGGTATATCGGCAGCAGGTGAGCGCTTA TCATCATTTTCAGACACTGTGATTGAAAATGTATTTAACAATCTCAAGCCAGCCCATACTTTTTGCTATTTTACTTACCA GGAGAGCTGA
Upstream 100 bases:
>100_bases CTGACCGAAAAATAATCACGCCCGTCGATAATGTTACCCCACAGGTCGATGATTCTGTTGTCGAGTGGTTGCGTGTCGGG ACCATCACCGTGGCTCTGCT
Downstream 100 bases:
>100_bases TAATGAAAAATATCATGCCGCCAATTAATACCCCTGACAATGCATTTCATGACGGTAACCCGGCAACGGGTGAGCAAGGC ACGATTGTTCCAGGCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Protein; Bacteriophage Tail Protein; Phage Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTFSTLLGLLLPPVAYDSQQPKIHAEMQAEGNELDTASLLANAVLGGVTPFYANSLIADWERVLDITAEPEASYQQRLQV VLIKLSEFGGLSIPYFKRIAVSAGYQITIDELEPFRAGVNRAGDVIMAPEVIWVWRVNVFGSKTQTFRFRAGISAAGERL SSFSDTVIENVFNNLKPAHTFCYFTYQES
Sequences:
>Translated_189_residues MTFSTLLGLLLPPVAYDSQQPKIHAEMQAEGNELDTASLLANAVLGGVTPFYANSLIADWERVLDITAEPEASYQQRLQV VLIKLSEFGGLSIPYFKRIAVSAGYQITIDELEPFRAGVNRAGDVIMAPEVIWVWRVNVFGSKTQTFRFRAGISAAGERL SSFSDTVIENVFNNLKPAHTFCYFTYQES >Mature_188_residues TFSTLLGLLLPPVAYDSQQPKIHAEMQAEGNELDTASLLANAVLGGVTPFYANSLIADWERVLDITAEPEASYQQRLQVV LIKLSEFGGLSIPYFKRIAVSAGYQITIDELEPFRAGVNRAGDVIMAPEVIWVWRVNVFGSKTQTFRFRAGISAAGERLS SFSDTVIENVFNNLKPAHTFCYFTYQES
Specific function: Unknown
COG id: COG3778
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20975; Mature: 20844
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSTLLGLLLPPVAYDSQQPKIHAEMQAEGNELDTASLLANAVLGGVTPFYANSLIADW CCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH ERVLDITAEPEASYQQRLQVVLIKLSEFGGLSIPYFKRIAVSAGYQITIDELEPFRAGVN HHHHCCCCCCCHHHHHHHHHHHEEHHCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHCCC RAGDVIMAPEVIWVWRVNVFGSKTQTFRFRAGISAAGERLSSFSDTVIENVFNNLKPAHT CCCCEEECCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCE FCYFTYQES EEEEEEECC >Mature Secondary Structure TFSTLLGLLLPPVAYDSQQPKIHAEMQAEGNELDTASLLANAVLGGVTPFYANSLIADW CHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH ERVLDITAEPEASYQQRLQVVLIKLSEFGGLSIPYFKRIAVSAGYQITIDELEPFRAGVN HHHHCCCCCCCHHHHHHHHHHHEEHHCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHCCC RAGDVIMAPEVIWVWRVNVFGSKTQTFRFRAGISAAGERLSSFSDTVIENVFNNLKPAHT CCCCEEECCCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCE FCYFTYQES EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA