Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is stfR [C]

Identifier: 170022444

GI number: 170022444

Start: 234521

End: 235747

Strand: Reverse

Name: stfR [C]

Synonym: YPK_0183

Alternate gene names: 170022444

Gene position: 235747-234521 (Counterclockwise)

Preceding gene: 170022445

Following gene: 170022443

Centisome position: 5.03

GC content: 44.82

Gene sequence:

>1227_bases
ATGAAAAATATCATGCCGCCAATTAATACCCCTGACAATGCATTTCATGACGGTAACCCGGCAACGGGTGAGCAAGGCAC
GATTGTTCCAGGCGCGTGGTTGAATAACGTGCAAAGCGGTGTTATTAGCATTCAACAAGAATTATTGTCTGTATTAACGA
AAGCCGGAATAGAAATAGATGAAACAAAGCAAGACCAATTAGTTACTGCTATAACAAAATTAATAACCCAGGGCATCCCT
GAACTACCCTCTGCATCATTAGCCCAAAAAGGTATCGTGCAATTAAGTAGCGCGACAAACAGTGACAGTGAAACGCTAGC
TGCAACATCAAAAGCTGTTAAAACGGCAAATGACGCCGCCCTGAAAATCGTGAATAACTTATCTGAAATAGCCGCAGCGG
GACCGGGCGCTGTACTTGCTGCAATCACAAATCTGAATTTATTGACGACAGTAAATAGAGCTAACGGATCATTGCAATCT
GCAAGCAATTTATCAGAGATAAATTTATCAGGACCTGCCGCTATGGCCGCGGCTGTTGCCAATCTTGGATTAACTGAAGC
CGCTGCTGCTGTTGCTAATGCATTGAAGAAAAGTGCAAATCTGTCTGATGTAGCCAACCCTGCCGCAGCTTTGAAAAACA
TCGGTGGATTTGCTGTTAGAGGGCCTCTTGATTCAAAAAATCTAAATTTAATCGGGAATACTGATGAAATTGGAGTGTGG
TATCAGATAACCGACGCTGTGACTGAAAATAATAATTATCCAGTGAGAGCCAGCGGAACCCTGCTTGTCATGCCAAGCGC
TTATGGTTGTCAGCAAGAATACACCTCGTATTCCGGATTGAAGTTTGTTCGGGGGCTGAGTGCTGTATGGAGTGGCTCCG
GCCCGTGGCAAGCGTGGCAGCAAATATCAGCTCAACAGCCGAAAGCAGTGACAACAAGTGACTATATCCGTATTCCTGAC
GTGCCAGGCGGATTGATTATTCAGTGGTTCGCTGGAAATACATCGATGGGTGAAGCATCGATGGGACCATTATCATTTCC
AATCGCATTCCCCTCCGCTTGTATATTTTCAAGCGTATCAACACTCGGGAATGGCACTGGTGCATGTGACCAGATGTTTC
AAGTCACATCAACAAACAGAAATTCTATCACTCTGTTTTCTCAAGTCTTTGGTTCCGGTTCGGTCCCCGGTACTGCGATC
CCTCTCATTTTAGTTATAGGGTATTAA

Upstream 100 bases:

>100_bases
AGCGCTTATCATCATTTTCAGACACTGTGATTGAAAATGTATTTAACAATCTCAAGCCAGCCCATACTTTTTGCTATTTT
ACTTACCAGGAGAGCTGATA

Downstream 100 bases:

>100_bases
GAGGTTTATATGATGATTTATTTTAGCGCAACAATAGGTGGATTTATCCCGGGTGAATGGAGAGTTGACGGAACATACAC
TGATGAAACTTGGCCCACTG

Product: tail fiber repeat 2-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKNIMPPINTPDNAFHDGNPATGEQGTIVPGAWLNNVQSGVISIQQELLSVLTKAGIEIDETKQDQLVTAITKLITQGIP
ELPSASLAQKGIVQLSSATNSDSETLAATSKAVKTANDAALKIVNNLSEIAAAGPGAVLAAITNLNLLTTVNRANGSLQS
ASNLSEINLSGPAAMAAAVANLGLTEAAAAVANALKKSANLSDVANPAAALKNIGGFAVRGPLDSKNLNLIGNTDEIGVW
YQITDAVTENNNYPVRASGTLLVMPSAYGCQQEYTSYSGLKFVRGLSAVWSGSGPWQAWQQISAQQPKAVTTSDYIRIPD
VPGGLIIQWFAGNTSMGEASMGPLSFPIAFPSACIFSSVSTLGNGTGACDQMFQVTSTNRNSITLFSQVFGSGSVPGTAI
PLILVIGY

Sequences:

>Translated_408_residues
MKNIMPPINTPDNAFHDGNPATGEQGTIVPGAWLNNVQSGVISIQQELLSVLTKAGIEIDETKQDQLVTAITKLITQGIP
ELPSASLAQKGIVQLSSATNSDSETLAATSKAVKTANDAALKIVNNLSEIAAAGPGAVLAAITNLNLLTTVNRANGSLQS
ASNLSEINLSGPAAMAAAVANLGLTEAAAAVANALKKSANLSDVANPAAALKNIGGFAVRGPLDSKNLNLIGNTDEIGVW
YQITDAVTENNNYPVRASGTLLVMPSAYGCQQEYTSYSGLKFVRGLSAVWSGSGPWQAWQQISAQQPKAVTTSDYIRIPD
VPGGLIIQWFAGNTSMGEASMGPLSFPIAFPSACIFSSVSTLGNGTGACDQMFQVTSTNRNSITLFSQVFGSGSVPGTAI
PLILVIGY
>Mature_408_residues
MKNIMPPINTPDNAFHDGNPATGEQGTIVPGAWLNNVQSGVISIQQELLSVLTKAGIEIDETKQDQLVTAITKLITQGIP
ELPSASLAQKGIVQLSSATNSDSETLAATSKAVKTANDAALKIVNNLSEIAAAGPGAVLAAITNLNLLTTVNRANGSLQS
ASNLSEINLSGPAAMAAAVANLGLTEAAAAVANALKKSANLSDVANPAAALKNIGGFAVRGPLDSKNLNLIGNTDEIGVW
YQITDAVTENNNYPVRASGTLLVMPSAYGCQQEYTSYSGLKFVRGLSAVWSGSGPWQAWQQISAQQPKAVTTSDYIRIPD
VPGGLIIQWFAGNTSMGEASMGPLSFPIAFPSACIFSSVSTLGNGTGACDQMFQVTSTNRNSITLFSQVFGSGSVPGTAI
PLILVIGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42109; Mature: 42109

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIMPPINTPDNAFHDGNPATGEQGTIVPGAWLNNVQSGVISIQQELLSVLTKAGIEID
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ETKQDQLVTAITKLITQGIPELPSASLAQKGIVQLSSATNSDSETLAATSKAVKTANDAA
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHH
LKIVNNLSEIAAAGPGAVLAAITNLNLLTTVNRANGSLQSASNLSEINLSGPAAMAAAVA
HHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCHHHCCCCCEECCCCHHHHHHHHH
NLGLTEAAAAVANALKKSANLSDVANPAAALKNIGGFAVRGPLDSKNLNLIGNTDEIGVW
HCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCEEEECCCCCCCEEEECCCCCCEEE
YQITDAVTENNNYPVRASGTLLVMPSAYGCQQEYTSYSGLKFVRGLSAVWSGSGPWQAWQ
EEEEEHEECCCCCCEEECCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH
QISAQQPKAVTTSDYIRIPDVPGGLIIQWFAGNTSMGEASMGPLSFPIAFPSACIFSSVS
HHHCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHH
TLGNGTGACDQMFQVTSTNRNSITLFSQVFGSGSVPGTAIPLILVIGY
HHCCCCCHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKNIMPPINTPDNAFHDGNPATGEQGTIVPGAWLNNVQSGVISIQQELLSVLTKAGIEID
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ETKQDQLVTAITKLITQGIPELPSASLAQKGIVQLSSATNSDSETLAATSKAVKTANDAA
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCCCHHH
LKIVNNLSEIAAAGPGAVLAAITNLNLLTTVNRANGSLQSASNLSEINLSGPAAMAAAVA
HHHHHHHHHHHHCCCCHHHHHHHCCEEEEEEECCCCCHHHCCCCCEECCCCHHHHHHHHH
NLGLTEAAAAVANALKKSANLSDVANPAAALKNIGGFAVRGPLDSKNLNLIGNTDEIGVW
HCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCEEEECCCCCCCEEEECCCCCCEEE
YQITDAVTENNNYPVRASGTLLVMPSAYGCQQEYTSYSGLKFVRGLSAVWSGSGPWQAWQ
EEEEEHEECCCCCCEEECCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHH
QISAQQPKAVTTSDYIRIPDVPGGLIIQWFAGNTSMGEASMGPLSFPIAFPSACIFSSVS
HHHCCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCCCEECCHHHHHHHHHHHHH
TLGNGTGACDQMFQVTSTNRNSITLFSQVFGSGSVPGTAIPLILVIGY
HHCCCCCHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA