| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is uhpB [H]
Identifier: 170022344
GI number: 170022344
Start: 94709
End: 96238
Strand: Direct
Name: uhpB [H]
Synonym: YPK_0082
Alternate gene names: 170022344
Gene position: 94709-96238 (Clockwise)
Preceding gene: 170022343
Following gene: 170022345
Centisome position: 2.02
GC content: 48.89
Gene sequence:
>1530_bases ATGATACAGCGCTTGGTGATGCTGCTGGCGTTATTCTTTATTTATTTTACTGCGGCTTTCTGCCTGTGGGCTATAGGAAC ACAATTAGCTGATCGGGCTTTACAGTCGCTGCTGTTGTTCCCATTTGGTCTGCGTATGGGGATTTTATTACAAAGTCCAC GTGCTTACTGGCCTGGCATTTTACTGGGTGATGTCCTGTTGTGGTGGCTATTAGCCGATCAATTCGATGATTTATATCAG TTGTGGGTCGCCTTGCCGCTGTTGTTATTGACCACCTTATTGGCCCTTTTTGCCTCCCCGTGGTTATTGCGCCATCAGCA AAATGAGAGCGAATGGCAATGGCCGTTAATGCAGGGGGGCGTTATCACGGTTGCCGCGCTAATACAGGCGTTGGGGTGGC AGATAGCCAGTGGGCAGGGCGCAATGGCGCTCTTATTAGGGTTGGTTGGTGGCTTTACCATCGCGCCTACCTGCCTGCTG CTGTGGCACTATCTGGCACGTCAAATCTGGTTACCGCTTGAACCTGGGTTGATACATAAACCGGTTAACCTGCGGTTGCG GCATATCCTGTGGTATCTACTGCTATTTGCCATCAGTATCTGGTTACAGTACCAAGTGACTGAAACAGATTTACGCTTAT TTGTACCGTTCTGTTTGGCGATCCCCATTGTGTTTATGGCATATCGCTATGGCTGGCAGGGGGCGTTGGCGGCCACGTTA CTCAATGGTGTAGTGCTGTTGATTAATACACCTGAACCCCTTGAATCTCATCGTGGCTTGCTACTTTCACTGTTGGCACA AAGTCTAACAGGTCTGCTCTTGGGATCCGGCATTCAACGACAGCGGGAGTTGAACGATCAACTACAAATAAAATTGAACG AAAACCGTGAGTTGGCTAAAGCATTAGTGGTTTCTGAGGAGCATACACGGCACGATGTCGCGCGTGAGCTACATGATGAA GTGGGGCAAACCGTAACGGTTATCCGTACCCAAGCCAGTATTATTAAACGTCTGACCACCCAGCAACCGGTACTGACCAG TGCAGAGATGATAGAAACTGCGGCATTGCGGGTTTATGATGGTGTCCATGACGTATTGGCTAAATTATGGCCAGCGGCAT TAAATAATTTGCCGCTGTCGGCCGCCATCGCTGCATTGATGCGCGAACTCATTCCGCAAGACCAATCGGTGCTCGGTGTG CTTAACTGGCAGGTCAATGACCATCCGATGGATGAGACGTTGAAAATTACGCTTTACCGTATATGTCAGGAGGGGGTGAC CAATGCTTATCGGCATGGTGCCGCCAGCCGAATTGAAATTAATGCACGGCAGGATAACCAACAGATATATCTAACGATTA GCGATAATGGTAAAGGTATCGATTTAGCCTCAATTACTCCAGGCTATGGGCTACGGGGTATTCAGTCACGGGTCAGTGCG TTTGGGGGCAATGTGAGCCTAAGCGTTGATAACGGTACTTGCTTAAATGTGACCCTGCCCACAGTTTCTTTGTCTACAAA AGGAAACTAA
Upstream 100 bases:
>100_bases TCGGGCTATCGCCAAAAACGGTCCATGTGCACCGGGCTAATTTATTTGCCAAGTTGGGCATCAGCAATAATGTTGAGCTG GCTAAGAAAGTACTGAACCT
Downstream 100 bases:
>100_bases GAAATATTCTCGTTGGTAGCGAGAATTCCCCCGTGTGTTTTCATACACATGCAGATGATGATTATTGCACTTACAAAATA CCCTGAGGCCCGAGATGTGG
Product: sensory histidine kinase UhpB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MIQRLVMLLALFFIYFTAAFCLWAIGTQLADRALQSLLLFPFGLRMGILLQSPRAYWPGILLGDVLLWWLLADQFDDLYQ LWVALPLLLLTTLLALFASPWLLRHQQNESEWQWPLMQGGVITVAALIQALGWQIASGQGAMALLLGLVGGFTIAPTCLL LWHYLARQIWLPLEPGLIHKPVNLRLRHILWYLLLFAISIWLQYQVTETDLRLFVPFCLAIPIVFMAYRYGWQGALAATL LNGVVLLINTPEPLESHRGLLLSLLAQSLTGLLLGSGIQRQRELNDQLQIKLNENRELAKALVVSEEHTRHDVARELHDE VGQTVTVIRTQASIIKRLTTQQPVLTSAEMIETAALRVYDGVHDVLAKLWPAALNNLPLSAAIAALMRELIPQDQSVLGV LNWQVNDHPMDETLKITLYRICQEGVTNAYRHGAASRIEINARQDNQQIYLTISDNGKGIDLASITPGYGLRGIQSRVSA FGGNVSLSVDNGTCLNVTLPTVSLSTKGN
Sequences:
>Translated_509_residues MIQRLVMLLALFFIYFTAAFCLWAIGTQLADRALQSLLLFPFGLRMGILLQSPRAYWPGILLGDVLLWWLLADQFDDLYQ LWVALPLLLLTTLLALFASPWLLRHQQNESEWQWPLMQGGVITVAALIQALGWQIASGQGAMALLLGLVGGFTIAPTCLL LWHYLARQIWLPLEPGLIHKPVNLRLRHILWYLLLFAISIWLQYQVTETDLRLFVPFCLAIPIVFMAYRYGWQGALAATL LNGVVLLINTPEPLESHRGLLLSLLAQSLTGLLLGSGIQRQRELNDQLQIKLNENRELAKALVVSEEHTRHDVARELHDE VGQTVTVIRTQASIIKRLTTQQPVLTSAEMIETAALRVYDGVHDVLAKLWPAALNNLPLSAAIAALMRELIPQDQSVLGV LNWQVNDHPMDETLKITLYRICQEGVTNAYRHGAASRIEINARQDNQQIYLTISDNGKGIDLASITPGYGLRGIQSRVSA FGGNVSLSVDNGTCLNVTLPTVSLSTKGN >Mature_509_residues MIQRLVMLLALFFIYFTAAFCLWAIGTQLADRALQSLLLFPFGLRMGILLQSPRAYWPGILLGDVLLWWLLADQFDDLYQ LWVALPLLLLTTLLALFASPWLLRHQQNESEWQWPLMQGGVITVAALIQALGWQIASGQGAMALLLGLVGGFTIAPTCLL LWHYLARQIWLPLEPGLIHKPVNLRLRHILWYLLLFAISIWLQYQVTETDLRLFVPFCLAIPIVFMAYRYGWQGALAATL LNGVVLLINTPEPLESHRGLLLSLLAQSLTGLLLGSGIQRQRELNDQLQIKLNENRELAKALVVSEEHTRHDVARELHDE VGQTVTVIRTQASIIKRLTTQQPVLTSAEMIETAALRVYDGVHDVLAKLWPAALNNLPLSAAIAALMRELIPQDQSVLGV LNWQVNDHPMDETLKITLYRICQEGVTNAYRHGAASRIEINARQDNQQIYLTISDNGKGIDLASITPGYGLRGIQSRVSA FGGNVSLSVDNGTCLNVTLPTVSLSTKGN
Specific function: Member of the two-component regulatory system uhpB/uhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates uhpA in response to environmental signals [H]
COG id: COG3851
COG function: function code T; Signal transduction histidine kinase, glucose-6-phosphate specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=506, Percent_Identity=44.8616600790514, Blast_Score=357, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR007895 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; PF05231 MASE1 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56745; Mature: 56745
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQRLVMLLALFFIYFTAAFCLWAIGTQLADRALQSLLLFPFGLRMGILLQSPRAYWPGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LLGDVLLWWLLADQFDDLYQLWVALPLLLLTTLLALFASPWLLRHQQNESEWQWPLMQGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHCCC VITVAALIQALGWQIASGQGAMALLLGLVGGFTIAPTCLLLWHYLARQIWLPLEPGLIHK HHHHHHHHHHHCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEC PVNLRLRHILWYLLLFAISIWLQYQVTETDLRLFVPFCLAIPIVFMAYRYGWQGALAATL CHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LNGVVLLINTPEPLESHRGLLLSLLAQSLTGLLLGSGIQRQRELNDQLQIKLNENRELAK HCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHH ALVVSEEHTRHDVARELHDEVGQTVTVIRTQASIIKRLTTQQPVLTSAEMIETAALRVYD HHHHCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GVHDVLAKLWPAALNNLPLSAAIAALMRELIPQDQSVLGVLNWQVNDHPMDETLKITLYR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ICQEGVTNAYRHGAASRIEINARQDNQQIYLTISDNGKGIDLASITPGYGLRGIQSRVSA HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH FGGNVSLSVDNGTCLNVTLPTVSLSTKGN CCCCEEEEECCCEEEEEEECEEEECCCCC >Mature Secondary Structure MIQRLVMLLALFFIYFTAAFCLWAIGTQLADRALQSLLLFPFGLRMGILLQSPRAYWPGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LLGDVLLWWLLADQFDDLYQLWVALPLLLLTTLLALFASPWLLRHQQNESEWQWPLMQGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHCCC VITVAALIQALGWQIASGQGAMALLLGLVGGFTIAPTCLLLWHYLARQIWLPLEPGLIHK HHHHHHHHHHHCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEC PVNLRLRHILWYLLLFAISIWLQYQVTETDLRLFVPFCLAIPIVFMAYRYGWQGALAATL CHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LNGVVLLINTPEPLESHRGLLLSLLAQSLTGLLLGSGIQRQRELNDQLQIKLNENRELAK HCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHH ALVVSEEHTRHDVARELHDEVGQTVTVIRTQASIIKRLTTQQPVLTSAEMIETAALRVYD HHHHCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GVHDVLAKLWPAALNNLPLSAAIAALMRELIPQDQSVLGVLNWQVNDHPMDETLKITLYR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHH ICQEGVTNAYRHGAASRIEINARQDNQQIYLTISDNGKGIDLASITPGYGLRGIQSRVSA HHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH FGGNVSLSVDNGTCLNVTLPTVSLSTKGN CCCCEEEEECCCEEEEEEECEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3301805; 1569007; 7686882; 9278503 [H]