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The map label for this gene is uhpA [H]

Identifier: 170022343

GI number: 170022343

Start: 94122

End: 94712

Strand: Direct

Name: uhpA [H]

Synonym: YPK_0081

Alternate gene names: 170022343

Gene position: 94122-94712 (Clockwise)

Preceding gene: 170022342

Following gene: 170022344

Centisome position: 2.01

GC content: 51.44

Gene sequence:

>591_bases
ATGACTTACCGTGTTGTATTTATTGATGATCATGACATTGTGCGCTCGGGTTTTGCACAGCTACTCTCGCTGGAGGAGGA
TATCCAGGTTGTTGGTGAGTTTAGCTCAGCCAAGCAGGCTCGTGCTGGGTTGCCGGGCTTACAGGCGAATATCTGTATTT
GTGATATTTCCATGCCTGATGAGAACGGATTAGATTTATTAAAAGGGTTACCTTCAGGGATGGGGGTCATCATGCTCTCT
ATGCATGACAGTCCTGCGTTGGTAGAAACGGCGCTGGAGCGTGGAGCACGCGGCTTTCTTTCTAAACGCTGTAAGCCCGA
AGACCTGATCTCTGCCGTCCGAACGGTAGGCAGCGGCGGGGTGTATCTGATGCCTGAAATTGCCCAACAATTGGCACGGG
TTGCTGTCGATCCATTGACCCGCCGTGAGCGAGAGGTTGCAGTGCTGTTGGCCGAAGGCATGGAAGTACGCGAGATTGCC
GAGTCGCTCGGGCTATCGCCAAAAACGGTCCATGTGCACCGGGCTAATTTATTTGCCAAGTTGGGCATCAGCAATAATGT
TGAGCTGGCTAAGAAAGTACTGAACCTATGA

Upstream 100 bases:

>100_bases
CTTACCCAAGTCTGGCCCAATTTTTGATGTGCCTCCTCATTGTTGTTTCACGGCTAAGGTATACTTTCAAATCCGATCCC
CCTCCAGATGGAGCCACACC

Downstream 100 bases:

>100_bases
TACAGCGCTTGGTGATGCTGCTGGCGTTATTCTTTATTTATTTTACTGCGGCTTTCTGCCTGTGGGCTATAGGAACACAA
TTAGCTGATCGGGCTTTACA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTYRVVFIDDHDIVRSGFAQLLSLEEDIQVVGEFSSAKQARAGLPGLQANICICDISMPDENGLDLLKGLPSGMGVIMLS
MHDSPALVETALERGARGFLSKRCKPEDLISAVRTVGSGGVYLMPEIAQQLARVAVDPLTRREREVAVLLAEGMEVREIA
ESLGLSPKTVHVHRANLFAKLGISNNVELAKKVLNL

Sequences:

>Translated_196_residues
MTYRVVFIDDHDIVRSGFAQLLSLEEDIQVVGEFSSAKQARAGLPGLQANICICDISMPDENGLDLLKGLPSGMGVIMLS
MHDSPALVETALERGARGFLSKRCKPEDLISAVRTVGSGGVYLMPEIAQQLARVAVDPLTRREREVAVLLAEGMEVREIA
ESLGLSPKTVHVHRANLFAKLGISNNVELAKKVLNL
>Mature_195_residues
TYRVVFIDDHDIVRSGFAQLLSLEEDIQVVGEFSSAKQARAGLPGLQANICICDISMPDENGLDLLKGLPSGMGVIMLSM
HDSPALVETALERGARGFLSKRCKPEDLISAVRTVGSGGVYLMPEIAQQLARVAVDPLTRREREVAVLLAEGMEVREIAE
SLGLSPKTVHVHRANLFAKLGISNNVELAKKVLNL

Specific function: Appears to be the positive activator of uhpT transcription [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=191, Percent_Identity=67.0157068062827, Blast_Score=259, Evalue=7e-71,
Organism=Escherichia coli, GI1788222, Length=198, Percent_Identity=34.8484848484849, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1788546, Length=198, Percent_Identity=31.8181818181818, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1787473, Length=184, Percent_Identity=35.8695652173913, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1788521, Length=197, Percent_Identity=32.48730964467, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786747, Length=195, Percent_Identity=29.2307692307692, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1788712, Length=185, Percent_Identity=25.9459459459459, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21218; Mature: 21087

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRVVFIDDHDIVRSGFAQLLSLEEDIQVVGEFSSAKQARAGLPGLQANICICDISMPD
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
ENGLDLLKGLPSGMGVIMLSMHDSPALVETALERGARGFLSKRCKPEDLISAVRTVGSGG
CCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
VYLMPEIAQQLARVAVDPLTRREREVAVLLAEGMEVREIAESLGLSPKTVHVHRANLFAK
EEECHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEHHHEEEE
LGISNNVELAKKVLNL
CCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TYRVVFIDDHDIVRSGFAQLLSLEEDIQVVGEFSSAKQARAGLPGLQANICICDISMPD
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
ENGLDLLKGLPSGMGVIMLSMHDSPALVETALERGARGFLSKRCKPEDLISAVRTVGSGG
CCCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
VYLMPEIAQQLARVAVDPLTRREREVAVLLAEGMEVREIAESLGLSPKTVHVHRANLFAK
EEECHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEHHHEEEE
LGISNNVELAKKVLNL
CCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]