| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170022324
Identifier: 170022324
GI number: 170022324
Start: 71077
End: 72345
Strand: Direct
Name: 170022324
Synonym: YPK_0062
Alternate gene names: NA
Gene position: 71077-72345 (Clockwise)
Preceding gene: 170022323
Following gene: 170022328
Centisome position: 1.52
GC content: 33.57
Gene sequence:
>1269_bases ATGAATCAGCTAAGCTTACATAATACGAATGTTCTGAAATATTTAGAATTAGATGAAGATGCTATAGATTTTTATGTATT AAAAGACATGGTTGATCTGGATTCTATAGATTCGGAGCTGAGAGAGTGCTTATCAATTAAAGAAATGAGAGAATCTGGTA TTTTTTTTACAGGTTCAAAGCTAGCTATTTTCGCAGTTAGTTCCTTCAGAGTACCTATTACTTTTGATTCCGTCATTTTA GATCCTACATGCGGTGCGGGTAATCTATTAATAGCTTGCTCTCGTCAATTGGGTGTAGAACCGACCTTATCTCAAACATT AGCTAAATGGAAAAAAGTTCTTCGAGGATATGATATCCATCAATCACTTGTTGATATGACCAAGCTAAGGATAATAGTTG AAATACTATACAGAGGTGTATATAAGGATTGTAGCATCCACGATGCGCTATTACTCTTGGATAATATTACATGCAGGAAT GCTTTAACTTTATCTGAAAATGAATTATCAAAAGTAACACATGTAATTTTTAACCCACCTTTTTTTAATAGTCCTTCTCC CCGTAAAAATTATTGGAAAACTGGTGACGTTAATATAGCAGGAGTTATTTTTGATTTTTATTTGCGATTACTTCCACCAA AATGTCAAATTAGTGCAATTTTACCTGATGTTTTAAGATCTGGTTCTCGTTATACTGATTTCAGAGAATTCGTCAGTCGC TCGCTTCAAGCTAAATGTGAAATTTGGGGACGATTTAATTTAAAAACTGATGTTGATGTATTTGTTCTTTCTGGGACTAT AGTTAACAATTCTAAACAGGATATTAAATGGTATAAAGAAATAGATAAATATTCAAAATTATCAGATAGATACGATGTAA GGGTGGGGCCGTTAGTTCCATATCGAGACCCTGAGGAAGGTTGTGAGTATCCTTATTTTCATCCTAAAAATTGCCCAACT TGGGGGGTCATTAAGATAAATACTGAGATGCGGCGTTTTAAAGGTACTGTTTTAAAAGCACCTTTTGTTTTAGTAAAAAG AACCTCCAGCCCTTCAGATAAATTCCGAGCTGCGGCAACTTTAGTTAATATTAATGGTTTTATTGCAGTAGAGAACCACA TGATTGTGATTACGCCTAAGAGTGGAAAGTTTGAAGAATGCAAAAAACTTATGAAAATATTAAAATCACAGTCTACAAAT GATTTTTTAAATGATCGAGCTCGAATGAGACACTTAACTGTGGGTGTAATTAAGGATATTCCAATATAG
Upstream 100 bases:
>100_bases ATTTTTTATTTCTTTTATATCATTTTGTTATGTGCAATAAAGATAGAGAAAATCCCGGTTTTATGATATATTTTTTATAA AAATAACTGCAGTTTAAATT
Downstream 100 bases:
>100_bases GAATTTTAAAGCACCTGCATAGCAGGTGATTCATATTATACTGAATGAGGATAAATTTCCTTTATGGCTTTTTCTAATTT TAGATTTATATCATCTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MNQLSLHNTNVLKYLELDEDAIDFYVLKDMVDLDSIDSELRECLSIKEMRESGIFFTGSKLAIFAVSSFRVPITFDSVIL DPTCGAGNLLIACSRQLGVEPTLSQTLAKWKKVLRGYDIHQSLVDMTKLRIIVEILYRGVYKDCSIHDALLLLDNITCRN ALTLSENELSKVTHVIFNPPFFNSPSPRKNYWKTGDVNIAGVIFDFYLRLLPPKCQISAILPDVLRSGSRYTDFREFVSR SLQAKCEIWGRFNLKTDVDVFVLSGTIVNNSKQDIKWYKEIDKYSKLSDRYDVRVGPLVPYRDPEEGCEYPYFHPKNCPT WGVIKINTEMRRFKGTVLKAPFVLVKRTSSPSDKFRAAATLVNINGFIAVENHMIVITPKSGKFEECKKLMKILKSQSTN DFLNDRARMRHLTVGVIKDIPI
Sequences:
>Translated_422_residues MNQLSLHNTNVLKYLELDEDAIDFYVLKDMVDLDSIDSELRECLSIKEMRESGIFFTGSKLAIFAVSSFRVPITFDSVIL DPTCGAGNLLIACSRQLGVEPTLSQTLAKWKKVLRGYDIHQSLVDMTKLRIIVEILYRGVYKDCSIHDALLLLDNITCRN ALTLSENELSKVTHVIFNPPFFNSPSPRKNYWKTGDVNIAGVIFDFYLRLLPPKCQISAILPDVLRSGSRYTDFREFVSR SLQAKCEIWGRFNLKTDVDVFVLSGTIVNNSKQDIKWYKEIDKYSKLSDRYDVRVGPLVPYRDPEEGCEYPYFHPKNCPT WGVIKINTEMRRFKGTVLKAPFVLVKRTSSPSDKFRAAATLVNINGFIAVENHMIVITPKSGKFEECKKLMKILKSQSTN DFLNDRARMRHLTVGVIKDIPI >Mature_422_residues MNQLSLHNTNVLKYLELDEDAIDFYVLKDMVDLDSIDSELRECLSIKEMRESGIFFTGSKLAIFAVSSFRVPITFDSVIL DPTCGAGNLLIACSRQLGVEPTLSQTLAKWKKVLRGYDIHQSLVDMTKLRIIVEILYRGVYKDCSIHDALLLLDNITCRN ALTLSENELSKVTHVIFNPPFFNSPSPRKNYWKTGDVNIAGVIFDFYLRLLPPKCQISAILPDVLRSGSRYTDFREFVSR SLQAKCEIWGRFNLKTDVDVFVLSGTIVNNSKQDIKWYKEIDKYSKLSDRYDVRVGPLVPYRDPEEGCEYPYFHPKNCPT WGVIKINTEMRRFKGTVLKAPFVLVKRTSSPSDKFRAAATLVNINGFIAVENHMIVITPKSGKFEECKKLMKILKSQSTN DFLNDRARMRHLTVGVIKDIPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48219; Mature: 48219
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLSLHNTNVLKYLELDEDAIDFYVLKDMVDLDSIDSELRECLSIKEMRESGIFFTGSK CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC LAIFAVSSFRVPITFDSVILDPTCGAGNLLIACSRQLGVEPTLSQTLAKWKKVLRGYDIH EEEEEEECEEEEEEECCEEECCCCCCCCEEEEECHHCCCCCHHHHHHHHHHHHHCCCCHH QSLVDMTKLRIIVEILYRGVYKDCSIHDALLLLDNITCRNALTLSENELSKVTHVIFNPP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHEEECCC FFNSPSPRKNYWKTGDVNIAGVIFDFYLRLLPPKCQISAILPDVLRSGSRYTDFREFVSR CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH SLQAKCEIWGRFNLKTDVDVFVLSGTIVNNSKQDIKWYKEIDKYSKLSDRYDVRVGPLVP HHHCEEEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC YRDPEEGCEYPYFHPKNCPTWGVIKINTEMRRFKGTVLKAPFVLVKRTSSPSDKFRAAAT CCCCHHCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEECCEEEEEECCCCCHHHHHEEE LVNINGFIAVENHMIVITPKSGKFEECKKLMKILKSQSTNDFLNDRARMRHLTVGVIKDI EEECCEEEEEECEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHCCC PI CC >Mature Secondary Structure MNQLSLHNTNVLKYLELDEDAIDFYVLKDMVDLDSIDSELRECLSIKEMRESGIFFTGSK CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC LAIFAVSSFRVPITFDSVILDPTCGAGNLLIACSRQLGVEPTLSQTLAKWKKVLRGYDIH EEEEEEECEEEEEEECCEEECCCCCCCCEEEEECHHCCCCCHHHHHHHHHHHHHCCCCHH QSLVDMTKLRIIVEILYRGVYKDCSIHDALLLLDNITCRNALTLSENELSKVTHVIFNPP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECHHHHHHHHHEEECCC FFNSPSPRKNYWKTGDVNIAGVIFDFYLRLLPPKCQISAILPDVLRSGSRYTDFREFVSR CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH SLQAKCEIWGRFNLKTDVDVFVLSGTIVNNSKQDIKWYKEIDKYSKLSDRYDVRVGPLVP HHHCEEEEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCC YRDPEEGCEYPYFHPKNCPTWGVIKINTEMRRFKGTVLKAPFVLVKRTSSPSDKFRAAAT CCCCHHCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEECCEEEEEECCCCCHHHHHEEE LVNINGFIAVENHMIVITPKSGKFEECKKLMKILKSQSTNDFLNDRARMRHLTVGVIKDI EEECCEEEEEECEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEHHCCC PI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA