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The map label for this gene is yqiG [H]

Identifier: 170022314

GI number: 170022314

Start: 56288

End: 58786

Strand: Direct

Name: yqiG [H]

Synonym: YPK_0052

Alternate gene names: 170022314

Gene position: 56288-58786 (Clockwise)

Preceding gene: 170022313

Following gene: 170022315

Centisome position: 1.2

GC content: 45.94

Gene sequence:

>2499_bases
ATGCCATATAATTCTAAAAGAAAAAAAACCATCTTCCTAATGGTGAAAGTATTAACAATAATTTTAGTATGGTTATTTTT
GCCTGAATCGACTGCAGTAGTAAAATTCAATACCAATATTATCGATGCTAAAGACCGTAGTAATATCGATCTCTCTCGTT
TTGAGGTTGATGATTACACCCCTCCGGGGAATTATCTCCTTGATATTCTTATTGATGATAGGCTGTTACCTGAACGTTAT
TTAGTGACTTATCTCGCTGTTGATGAAGGGAAATCAACGAAGCTCTGTTTGACGCCTGACTTAGTTAATCTATTTGGTTT
ATCTACGGAAGTACGTGAGTCGATGACATTATGGAATAACGACAAGTGTGTTGCTATTGATGAAAAAAAAGAGATAAAAA
TTCAGTACGATAAAGAGAAGCAATACTTAATTATTTCTATTCCCCAAGCTTGGCTGGCTTATAACGATCCCAATTGGGTG
CCGCCTTCACAATGGGGAAACGGTGTTGCTGGTACTTTATTGGATTACAATTTGTTTGGTTATCATTATTCACCGAATAT
GGGCGGCAGTACCACAAATTTCAGCAGCTACGGCACTACCGGGGCTAATATGGGACCATGGCGTATTCGTGCAGATTACC
AATATATCAATACAGAAACGGCGGGCGAGCACTACCGTAATTTTGATTGGTCGCAAGTGTATGCTTTTCGAGCCATCCCC
TCGATAGGGGCTAAATTTGTCGGTGGCCAGACTTATCTCAACTCCAGTATTTTTGATTCATTCCGTTTTCTGGGCACTTC
ACTTTCCAGTGATGAGCGCATGTTGCCACCGACGTTACGCGGCTATGCACCACAGGTAATGGGCATTGCTCACACCAACG
CCCGCGTGGTATTGAGCCAGAATGGGCGGGTGCTTTATCAGACTAACGTTGCACCAGGCCCCTTTGTTATTCAAGACATT
AGCGAAGCCGTACAAGGGAATATTGATGTCCGCGTGGAAGAGGAAGATGGCCGGGTCACCGTGTTTCAAGTCAACGCCGC
GAGCGTGCCATTTTTAACCCGTAAAGGTGCCGTGCGCTATAAAGCTGCGTTGGGTCGCCCGATGCTGGGGGGAAATAATT
CAGCCAGTAATCCGACATTCTTTAGCGGCGAATTCTCGTGGGGCGCATTTAACCATGTTTCATTATACGGTGGGCTGATG
ACGACTTCGCAGGATTACACCTCGGCTGCGTTGGGCATCGGGCAAAATTTATATGACTTCGGCGCACTGTCTATTGATAT
CACCCATTCCCGTGCGCAGTTACCAAATGAAGAACAGCAGAACGGGGAAAGCTATCGCGTTAATTATTCCAAACGTTTTG
AGCAGACTGACAGCCAGATTAGCTTTGCCGGATACCGTTTCTCGAAGAAGAATTTTATGAGTATGAGCCAGTATTTGGAT
TGGCTAAACGGCAATACTGCTCTGCAATATGACAAGCAGGCTTATACCGTGGCAGCTAACCAGTATCTGGCCTGGCCGGA
TATCACGATGTATTTATCGGTGACACGTAGAACCTATTGGAATGCGGCCTCCAGTAACAACTACAGTCTATCCATGAGCA
AGATTTTTGATATCGGTACTTTTAAGGGCATTTCGGCGACGATATCCGCTAATAAGGTGAATAATCAGTATGCCAATGAG
AATCAAATGTTCTTCTCACTCAGCGTACCGATCGGCATAGGCCAGCAGGCCAGCTATGATGCACAGCGAGGCCGCAATAC
CGGCTACACGCAAAATATCTCCTATTTCAACAACCAGAATCCGAAAAATATTTGGCGTATCAGCGCGGGTGGCGGTAACC
CAGAACTGCAAAAAGGTAATGGTGTGTTCCGTGGTGGTTATCAACATAGCTCGCCTTATGGTGAATTTGGTCTTGATGGT
AGCCATAAAAATAATGAGTACAACTCAATCAATACCAACTGGTATGGCTCAATTACGGCAACCGCTTATGGGGTTGCTGC
CCACCAGAATAAAGCGGGCAATGAACCAAGAATAATGGTTGATACCGGGGATGTCGCAGGGGTGTCGCTGAATAATAACT
CGGCAGTGACGAACCGTTTTGGTGTGGCGGTGGTCAGTGGCGCAACCAGCTACCAACAGTCTGATATTCGGGTGGATGTG
CAGAATCTGCCGGATGATATTGAGGTCTACAACACCGTTATCCAAAAAACGCTGACCGAAGGGGCAATTGGTTACCGTGA
GATAAGGGCGGTAAAAGGTCGGCAAATGATGGCGATTATTCGCCTGAAAGATGGCAGTTCCCCCCCCTTGGGGGCATCCG
TTATCACGGACAAAACGGGCGCTGAAGTTGGAATTGTGGGAGACGATGGCCTGACGTATTTGGCGGGATTACAAGACACT
GAGAGGCTGACTGTTCAATGGGGGAAAAAACAGTGCACGCTCATATTGCCAAAAGATAAAGGAATGAACTCAGGAAAGGT
ACTACTGCCCTGCCAGTAA

Upstream 100 bases:

>100_bases
AACCTATGCTCTGAATTATAAATAACAAATGTTTAAAGTAATTAAAGGGGAGGTAACTCCCCTCTAATTAATATTATCGC
CATAAGACAATGGTTTATAT

Downstream 100 bases:

>100_bases
GTGTTTTTGGGGAAAAATATTCATTAAAACGGTTGTTGATCGAAACTGAGTTATTCACAGCCAAATGCGGCCTTTTACAG
TGGAATAGCGAAATGAAAGA

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 832; Mature: 831

Protein sequence:

>832_residues
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERY
LVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQYLIISIPQAWLAYNDPNWV
PPSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI
SEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKAALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLM
TTSQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANE
NQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDG
SHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDT
ERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Sequences:

>Translated_832_residues
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERY
LVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQYLIISIPQAWLAYNDPNWV
PPSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI
SEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKAALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLM
TTSQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANE
NQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDG
SHKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDT
ERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
>Mature_831_residues
PYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERYL
VTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQYLIISIPQAWLAYNDPNWVP
PSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIPS
IGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDIS
EAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKAALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLMT
TSQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDW
LNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANEN
QMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGS
HKNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQ
NLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTE
RLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=816, Percent_Identity=40.0735294117647, Blast_Score=619, Evalue=1e-178,
Organism=Escherichia coli, GI1786332, Length=843, Percent_Identity=27.1648873072361, Blast_Score=303, Evalue=3e-83,
Organism=Escherichia coli, GI1790772, Length=870, Percent_Identity=26.7816091954023, Blast_Score=276, Evalue=4e-75,
Organism=Escherichia coli, GI1787172, Length=803, Percent_Identity=26.8991282689913, Blast_Score=268, Evalue=1e-72,
Organism=Escherichia coli, GI1786744, Length=841, Percent_Identity=27.2294887039239, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1789533, Length=795, Percent_Identity=27.7987421383648, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1788427, Length=860, Percent_Identity=24.7674418604651, Blast_Score=209, Evalue=8e-55,
Organism=Escherichia coli, GI1789610, Length=717, Percent_Identity=22.4546722454672, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92344; Mature: 92212

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYT
CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEEECCCC
PPGNYLLDILIDDRLLPERYLVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNN
CCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHCCCHHHHHHHHEECC
DKCVAIDEKKEIKIQYDKEKQYLIISIPQAWLAYNDPNWVPPSQWGNGVAGTLLDYNLFG
CCEEEECCCCEEEEEECCCCCEEEEECCHHHEEECCCCCCCCHHCCCCCEEEEEEEEEEE
YHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHCCCCHHHEEEEECCC
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQ
CCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEEEEEECCEEEEEEC
NGRVLYQTNVAPGPFVIQDISEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRY
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEEE
KAALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLMTTSQDYTSAALGIGQNLYDF
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCHHC
GALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
CEEEEEEECHHHCCCCHHHHCCCEEEEEHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHH
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGT
HHCCCEEEEECCCEEEEECCCEEECCCEEEEEEEEHHEEECCCCCCCEEEEHHHEEECCC
FKGISATISANKVNNQYANENQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQN
CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCEECEEECCCCC
PKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITA
CCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
EEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEEC
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCC
AEVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
CEEEEECCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure 
PYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYT
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEEECCCC
PPGNYLLDILIDDRLLPERYLVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNN
CCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHCCCHHHHHHHHEECC
DKCVAIDEKKEIKIQYDKEKQYLIISIPQAWLAYNDPNWVPPSQWGNGVAGTLLDYNLFG
CCEEEECCCCEEEEEECCCCCEEEEECCHHHEEECCCCCCCCHHCCCCCEEEEEEEEEEE
YHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHCCCCHHHEEEEECCC
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQ
CCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEEEEEECCEEEEEEC
NGRVLYQTNVAPGPFVIQDISEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRY
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEEE
KAALGRPMLGGNNSASNPTFFSGEFSWGAFNHVSLYGGLMTTSQDYTSAALGIGQNLYDF
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCHHC
GALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLD
CEEEEEEECHHHCCCCHHHHCCCEEEEEHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHH
WLNGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGT
HHCCCEEEEECCCEEEEECCCEEECCCEEEEEEEEHHEEECCCCCCCEEEEHHHEEECCC
FKGISATISANKVNNQYANENQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQN
CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCEECEEECCCCC
PKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITA
CCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
TAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDV
EEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEEC
QNLPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTG
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCC
AEVGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
CEEEEECCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]