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The map label for this gene is ribU [H]

Identifier: 169834355

GI number: 169834355

Start: 548643

End: 549206

Strand: Direct

Name: ribU [H]

Synonym: SPH_0599

Alternate gene names: 169834355

Gene position: 548643-549206 (Clockwise)

Preceding gene: 169833898

Following gene: 169834264

Centisome position: 24.43

GC content: 40.43

Gene sequence:

>564_bases
ATGACAAACACACGTCGACTTTCGACCATTGCAATTCTATCAGCCATCTCATTTGTGCTGATGTACTTTGACTTTCCGCT
TTTACCAGCGGCATCTTTCCTCAAGATCGAATTTAGTATCTTGCCAGTCCTTGTGGGTCTGGTGGTCATGGATTTGCCTG
CTGCTCTAGGAGTGCTCTTGCTTCGCTCACTCTTGAAATTGCTTCTTAACAGCCAAGGAGTGAATACTTACATTGGTTTG
CCGATGAATATCGTAGCTTTGGGAGTTTTTGTCATCGTATTTGCTTTGATTTGGAAAAAGGAACGGACAACCCTTCGTTT
CCTACTAGGCTCTCTAGCTGGAACTATTGGTTTAACCTTGGCCATGTTGGTTCTCAACTATGTTCATGCTGTTCCTTTGT
ACGCTAAGTTTGCTAACTTTGATATTGGAAAAATTTTGGGACTTTCCAACTACCTAATGACCATGGTATTACCTTTTAAC
TTGATTCAAGGTGTTATCTTTTCCGTTTCATTCTGGTTGTTGTATGTTCTCTTGAAACCAACCTTAAAACATTATGAGAG
ATAA

Upstream 100 bases:

>100_bases
AATAGAGTAAGAGGGAACTTTTGGGATATAAAAAGTGAGAATAGATAGAGGAATCCTTTCCAACTTCTTCTGATTTTATA
GAAAATTGGAGGAACCTGTT

Downstream 100 bases:

>100_bases
ACAAACATTTTTAATGAAGGGCAGTTTTGCCCTTTTACTTTTCGTTATTCTTGGCTACATGGTCAAATTTTACCCTGAAA
CGCTGGTCGGTTTTGACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLLLRSLLKLLLNSQGVNTYIGL
PMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTIGLTLAMLVLNYVHAVPLYAKFANFDIGKILGLSNYLMTMVLPFN
LIQGVIFSVSFWLLYVLLKPTLKHYER

Sequences:

>Translated_187_residues
MTNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLLLRSLLKLLLNSQGVNTYIGL
PMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTIGLTLAMLVLNYVHAVPLYAKFANFDIGKILGLSNYLMTMVLPFN
LIQGVIFSVSFWLLYVLLKPTLKHYER
>Mature_186_residues
TNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLLLRSLLKLLLNSQGVNTYIGLP
MNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTIGLTLAMLVLNYVHAVPLYAKFANFDIGKILGLSNYLMTMVLPFNL
IQGVIFSVSFWLLYVLLKPTLKHYER

Specific function: Mediates riboflavin uptake, probably via a facilitated diffusion mechanism. May also transport FMN and roseoflavin [H]

COG id: COG3601

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20809; Mature: 20678

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS00062 ALDOKETO_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSLLKLLLNSQGVNTYIGLPMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTIGLTL
HHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVLNYVHAVPLYAKFANFDIGKILGLSNYLMTMVLPFNLIQGVIFSVSFWLLYVLLKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLKHYER
HHHHCCC
>Mature Secondary Structure 
TNTRRLSTIAILSAISFVLMYFDFPLLPAASFLKIEFSILPVLVGLVVMDLPAALGVLL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSLLKLLLNSQGVNTYIGLPMNIVALGVFVIVFALIWKKERTTLRFLLGSLAGTIGLTL
HHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLVLNYVHAVPLYAKFANFDIGKILGLSNYLMTMVLPFNLIQGVIFSVSFWLLYVLLKP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLKHYER
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA