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The map label for this gene is lytB [H]

Identifier: 169833044

GI number: 169833044

Start: 982174

End: 984282

Strand: Direct

Name: lytB [H]

Synonym: SPH_1067

Alternate gene names: 169833044

Gene position: 982174-984282 (Clockwise)

Preceding gene: 169833969

Following gene: 169833180

Centisome position: 43.74

GC content: 38.93

Gene sequence:

>2109_bases
ATGAAGAAAGTAAGATTTATTTTTTTAGCTCTGCTATTTTTCTTAGCTAGTCCAGAGGGTGCAATGGCTAGTGATGGTAC
TTGGCAAGGAAAACAGTATCTGAAAGAAGATGGCAGTCAAGCAGCGAATGAGTGGATTTTTGATACTCATTATCAATCTT
GGTTCTATATAAAAGCAGATGCTAACTATGCTGAAAATGAATGGCTAAAGCAAGGTGACGACTATTTTTACCTCAAATCT
GGTGGCTATATGGCCAAATCAGAATGGGTAGAAGACAAGGGAGCCTTTTATTATCTTGACCAAGATGGAAAGATGAAAAG
AAATGCTTGGGTAGGAACTTCCTATGTTGGTGCAACAGGTGCCAAAGTAATAGAAGACTGGATCTATGATTCTCAATACG
ATGCTTGGTTTTATATCAAAGCAGATGGACAGCACGCAGAGAAAGAATGGCTCCAAATTAAAGGGAAGGACTATTATTTC
AAATCCGGTGGTTATCTACTGACAAGTCAGTGGATTAATCAAGCTTATGTGAATGCTAGTGGTGCCAAAGTACAGCAAGG
TTGGCTTTTTGACAAACAATACCAATCTTGGTTTTACATCAAAGAAAATGGAAACTATGCTGATAAAGAATGGATTTTCG
AGAATGGTCACTATTATTATCTAAAATCCGGTGGCTACATGGCAGCCAATGAATGGATTTGGGATAAGGAATCTTGGTTT
TATCTCAAATTTGATGGGAAAATAGCTGAAAAAGAATGGGTCTACGATTCTCATAGTCAAGCTTGGTACTACTTCAAATC
CGGTGGCTACATGGCAGCCAATGAATGGATTTGGGATAAGGAATCTTGGTTTTACCTCAAGTTTGATGGCAAAATGGCTG
AAAAAGAATGGGTCTACGATTCTCATAGTCAAGCCTGGTACTACTTCAAATCCGGTGGTTACATGACAGCCAATGAATGG
ATTTGGGATAAGGAATCTTGGTTTTATCTCAAATCTGATGGGAAAATAGCTGAAAAAGAATGGGTCTACGATTCTCATAG
TCAAGCTTGGTACTACTTCAAATCCGGTGGTTACATGACAGCCAATGAATGGATTTGGGATAAGGAATCTTGGTTTTACC
TCAAGTCTGATGGCAAAATGGCTGAAAAAGAATGGGTCTACGATTCTCATAGTCAAGCCTGGTACTACTTCAAATCTGGT
GGCTACATGGCGAAAAATGAGACAGTAGATGGTTATCAGCTTGGAAGCGATGGTAAATGGCTTGGAGGAAAAGCTACAAA
TAAAAATGCTGCTTACTATCAAGTAGTGCCTGTCACAGCCAATGTTTATGATTCAGATGGTGAAAAGCTTTCCTATATAT
CGCAAGGTAGTGTCGTATGGCTAGATAAGGATAGAAAAAGTGATGACAAGCGCTTGGCTATTACTATTTCTGGTTTGTCA
GGCTATATGAAAACAGAAGATTTACAAGCGCTAGATGCTAGTAAGGACTTTATCCCTTATTATGAGAGTGATGGCCACCG
TTTTTATCACTATGTGGCTCAGAATGCTAGTATCCCAGTAGCTTCTCATCTTTCTGATATGGAAGTAGGCAAGAAATATT
ATTCGGCAGATGGCCTGTATTTTGATGGTTTTAAGCTTGAGAATCCCTTCCTTTTCAAAGATTTAACAGAGGCTACAAAC
TACAGTGCTGAAGAATTGGATAAGGTATTTAGTTTGCTAAACATTAATAATAGCCTTTTGGAGAACAAGGGCGCTACTTT
TAAGGAAGCCGAAGAACATTACCATATCAATGCCCTTTATCTCCTTGCCCATAGTGCCCTAGAAAGTAACTGGGGAAGAA
GTAAAATTGCCAAAGATAAGAATAATTTCTTTGGCATTACAGCCTATGATACGACCCCTTACCTTTCTGCCAAGACATTT
GATGATGTGGATAAGGGAATTTTAGGTGCAACCAAGTGGATTAAGGAAAATTATATCGATAGGGGAAGAACTTTCCTTGG
AAACAAGGCTTCTGGTATGAATGTGGAATATGCTTCAGACCCTTATTGGGGCGAAAAAATTGCTAGTGTGATGATGAAAA
TCAATGAGAAGCTAGGTGGCAAAGATTAG

Upstream 100 bases:

>100_bases
AAACTGCAATCAATCTGTTCTTGATTTTTTATTAGTTTGTAATATGAATTTAGGAGAATTTTGGTACAATAAAATAAATA
AGAACAGAGGAAGAAGGTTA

Downstream 100 bases:

>100_bases
TACTATAAGTGAATATGATTTGAGTGAATAGTAAGTTAAAAATCCTGATTTCAAGTAAAATCAGGATTTTTTCATGGATG
CAATTTTTTTTGGAGTCTGG

Product: endo-beta-N-acetylglucosaminidase

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 702; Mature: 702

Protein sequence:

>702_residues
MKKVRFIFLALLFFLASPEGAMASDGTWQGKQYLKEDGSQAANEWIFDTHYQSWFYIKADANYAENEWLKQGDDYFYLKS
GGYMAKSEWVEDKGAFYYLDQDGKMKRNAWVGTSYVGATGAKVIEDWIYDSQYDAWFYIKADGQHAEKEWLQIKGKDYYF
KSGGYLLTSQWINQAYVNASGAKVQQGWLFDKQYQSWFYIKENGNYADKEWIFENGHYYYLKSGGYMAANEWIWDKESWF
YLKFDGKIAEKEWVYDSHSQAWYYFKSGGYMAANEWIWDKESWFYLKFDGKMAEKEWVYDSHSQAWYYFKSGGYMTANEW
IWDKESWFYLKSDGKIAEKEWVYDSHSQAWYYFKSGGYMTANEWIWDKESWFYLKSDGKMAEKEWVYDSHSQAWYYFKSG
GYMAKNETVDGYQLGSDGKWLGGKATNKNAAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGLS
GYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEVGKKYYSADGLYFDGFKLENPFLFKDLTEATN
YSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALYLLAHSALESNWGRSKIAKDKNNFFGITAYDTTPYLSAKTF
DDVDKGILGATKWIKENYIDRGRTFLGNKASGMNVEYASDPYWGEKIASVMMKINEKLGGKD

Sequences:

>Translated_702_residues
MKKVRFIFLALLFFLASPEGAMASDGTWQGKQYLKEDGSQAANEWIFDTHYQSWFYIKADANYAENEWLKQGDDYFYLKS
GGYMAKSEWVEDKGAFYYLDQDGKMKRNAWVGTSYVGATGAKVIEDWIYDSQYDAWFYIKADGQHAEKEWLQIKGKDYYF
KSGGYLLTSQWINQAYVNASGAKVQQGWLFDKQYQSWFYIKENGNYADKEWIFENGHYYYLKSGGYMAANEWIWDKESWF
YLKFDGKIAEKEWVYDSHSQAWYYFKSGGYMAANEWIWDKESWFYLKFDGKMAEKEWVYDSHSQAWYYFKSGGYMTANEW
IWDKESWFYLKSDGKIAEKEWVYDSHSQAWYYFKSGGYMTANEWIWDKESWFYLKSDGKMAEKEWVYDSHSQAWYYFKSG
GYMAKNETVDGYQLGSDGKWLGGKATNKNAAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGLS
GYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEVGKKYYSADGLYFDGFKLENPFLFKDLTEATN
YSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALYLLAHSALESNWGRSKIAKDKNNFFGITAYDTTPYLSAKTF
DDVDKGILGATKWIKENYIDRGRTFLGNKASGMNVEYASDPYWGEKIASVMMKINEKLGGKD
>Mature_702_residues
MKKVRFIFLALLFFLASPEGAMASDGTWQGKQYLKEDGSQAANEWIFDTHYQSWFYIKADANYAENEWLKQGDDYFYLKS
GGYMAKSEWVEDKGAFYYLDQDGKMKRNAWVGTSYVGATGAKVIEDWIYDSQYDAWFYIKADGQHAEKEWLQIKGKDYYF
KSGGYLLTSQWINQAYVNASGAKVQQGWLFDKQYQSWFYIKENGNYADKEWIFENGHYYYLKSGGYMAANEWIWDKESWF
YLKFDGKIAEKEWVYDSHSQAWYYFKSGGYMAANEWIWDKESWFYLKFDGKMAEKEWVYDSHSQAWYYFKSGGYMTANEW
IWDKESWFYLKSDGKIAEKEWVYDSHSQAWYYFKSGGYMTANEWIWDKESWFYLKSDGKMAEKEWVYDSHSQAWYYFKSG
GYMAKNETVDGYQLGSDGKWLGGKATNKNAAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGLS
GYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEVGKKYYSADGLYFDGFKLENPFLFKDLTEATN
YSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALYLLAHSALESNWGRSKIAKDKNNFFGITAYDTTPYLSAKTF
DDVDKGILGATKWIKENYIDRGRTFLGNKASGMNVEYASDPYWGEKIASVMMKINEKLGGKD

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 81954; Mature: 81954

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVRFIFLALLFFLASPEGAMASDGTWQGKQYLKEDGSQAANEWIFDTHYQSWFYIKAD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCEEECCCCEEEEEEEC
ANYAENEWLKQGDDYFYLKSGGYMAKSEWVEDKGAFYYLDQDGKMKRNAWVGTSYVGATG
CCCCCHHHHHCCCCEEEEECCCEEEHHHCCCCCCCEEEECCCCCEECCEEECCCCCCCCH
AKVIEDWIYDSQYDAWFYIKADGQHAEKEWLQIKGKDYYFKSGGYLLTSQWINQAYVNAS
HHHHHHHHCCCCCCEEEEEEECCCCCCCHHEEECCCEEEEECCCEEEEHHHHHHHEECCC
GAKVQQGWLFDKQYQSWFYIKENGNYADKEWIFENGHYYYLKSGGYMAANEWIWDKESWF
CCEEECCCEECCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCCEEEECCEEECCCCEE
YLKFDGKIAEKEWVYDSHSQAWYYFKSGGYMAANEWIWDKESWFYLKFDGKMAEKEWVYD
EEEECCCCCCCEEEECCCCCEEEEECCCCEEEECCEEECCCCEEEEEECCCCCCCCCCCC
SHSQAWYYFKSGGYMTANEWIWDKESWFYLKSDGKIAEKEWVYDSHSQAWYYFKSGGYMT
CCCCEEEEECCCCEEECCCEEECCCCEEEEECCCCCCCHHCEECCCCCEEEEECCCCEEE
ANEWIWDKESWFYLKSDGKMAEKEWVYDSHSQAWYYFKSGGYMAKNETVDGYQLGSDGKW
CCCEEECCCCEEEEECCCCCCCHHCCCCCCCCEEEEECCCCEEECCCCCCCEEECCCCCC
LGGKATNKNAAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGLS
CCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEECCC
GYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEVGKKYYSADGLY
CCCCCCCHHHHCCCCCCCCCEECCCCEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCEE
FDGFKLENPFLFKDLTEATNYSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALY
ECCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCEEEEEEE
LLAHSALESNWGRSKIAKDKNNFFGITAYDTTPYLSAKTFDDVDKGILGATKWIKENYID
EEHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGRTFLGNKASGMNVEYASDPYWGEKIASVMMKINEKLGGKD
CCCEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKVRFIFLALLFFLASPEGAMASDGTWQGKQYLKEDGSQAANEWIFDTHYQSWFYIKAD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCEEECCCCEEEEEEEC
ANYAENEWLKQGDDYFYLKSGGYMAKSEWVEDKGAFYYLDQDGKMKRNAWVGTSYVGATG
CCCCCHHHHHCCCCEEEEECCCEEEHHHCCCCCCCEEEECCCCCEECCEEECCCCCCCCH
AKVIEDWIYDSQYDAWFYIKADGQHAEKEWLQIKGKDYYFKSGGYLLTSQWINQAYVNAS
HHHHHHHHCCCCCCEEEEEEECCCCCCCHHEEECCCEEEEECCCEEEEHHHHHHHEECCC
GAKVQQGWLFDKQYQSWFYIKENGNYADKEWIFENGHYYYLKSGGYMAANEWIWDKESWF
CCEEECCCEECCCCCEEEEEEECCCCCCCEEEEECCCEEEEECCCEEEECCEEECCCCEE
YLKFDGKIAEKEWVYDSHSQAWYYFKSGGYMAANEWIWDKESWFYLKFDGKMAEKEWVYD
EEEECCCCCCCEEEECCCCCEEEEECCCCEEEECCEEECCCCEEEEEECCCCCCCCCCCC
SHSQAWYYFKSGGYMTANEWIWDKESWFYLKSDGKIAEKEWVYDSHSQAWYYFKSGGYMT
CCCCEEEEECCCCEEECCCEEECCCCEEEEECCCCCCCHHCEECCCCCEEEEECCCCEEE
ANEWIWDKESWFYLKSDGKMAEKEWVYDSHSQAWYYFKSGGYMAKNETVDGYQLGSDGKW
CCCEEECCCCEEEEECCCCCCCHHCCCCCCCCEEEEECCCCEEECCCCCCCEEECCCCCC
LGGKATNKNAAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGLS
CCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEECCC
GYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEVGKKYYSADGLY
CCCCCCCHHHHCCCCCCCCCEECCCCEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCEE
FDGFKLENPFLFKDLTEATNYSAEELDKVFSLLNINNSLLENKGATFKEAEEHYHINALY
ECCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHCEEEEEEE
LLAHSALESNWGRSKIAKDKNNFFGITAYDTTPYLSAKTFDDVDKGILGATKWIKENYID
EEHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGRTFLGNKASGMNVEYASDPYWGEKIASVMMKINEKLGGKD
CCCEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10096093; 11544234 [H]