Click here to switch to the map view.

The map label for this gene is 169832925

Identifier: 169832925

GI number: 169832925

Start: 659561

End: 660262

Strand: Direct

Name: 169832925

Synonym: SPH_0710

Alternate gene names: NA

Gene position: 659561-660262 (Clockwise)

Preceding gene: 169833676

Following gene: 169832456

Centisome position: 29.37

GC content: 45.44

Gene sequence:

>702_bases
ATGCGCTGGCTTTTTCGTTTGATAGGGGCTTTCTTTTCTTTTGTGTGGCGTTTGTTTTGGCGTCTGGTTTGGATAGTTGT
GCTCTTATGTGTGCTTGCTTTCGGACTTCTCTGGTATCTGAACGGGGATTTTCAAGGAGCGCTAAAGCAAGCAGAACGGT
CAGTAAAAATTGGTCAACAAAGTATTGACCAATGGGAGAAAACAGGGCAACTGCCTAAGTTAAGCCAGACAGATAGTCAC
CAGCATTCTGAAGGAAGGTGGCCACAGGTCTCTGCTCGTATTTACCTGGATCCGCAGATGGATTCACGCTTTCAAGAGGC
TTATTTAGAAGCAATCCAGAACTGGAATCAAACTGGTGCTTTTAACTTTGAACTCGTGACTGAGTCTAGTAAGGCGGATA
TTACGGCTACGGAGATGAACGACGGAGGCACTCCTGTGGCAGGAGAGGCGGAAAGTCAAACTAATCTCTTAACAGGGCAA
TTCTTGTCCGTAACGGTGCGGTTGAATCATTATTATTTGTCCAATCCATACTATGGCTACTCCTATGAACGCCTTGTCCA
TACGGCAGAACATGAGTTAGGTCATGCGATTGGCTTGGACCATACAGATGAGAAGTCTGTCATGCAACCAGCAGGTTCCT
TTTATGGTATCCAGGAAGAGGATGTTGCAAACCTCCGAAAAATATATGAGACTAGTGAGTAG

Upstream 100 bases:

>100_bases
CAAAAAAATAGTAGGACGTTAAGATGAAAAAGTCAGTATTTAGATTTCTTTTAGCTTCTTTTAGTAAAATAATTTTTATT
TGCTAGAAAGGTGGAGAGAC

Downstream 100 bases:

>100_bases
GGTACTATCTTTCCCTACTTTTTTTGCTATAATGGAACTATGAACAACTTGATTAAATCAAAACTAGAGCTCTTGCCGAC
CAGCCCTGGTTGCTACATTC

Product: matrixin family protein

Products: NA

Alternate protein names: Proteinase; Protease; Metalloprotease; Peptidase

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNGDFQGALKQAERSVKIGQQSIDQWEKTGQLPKLSQTDSH
QHSEGRWPQVSARIYLDPQMDSRFQEAYLEAIQNWNQTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQ
FLSVTVRLNHYYLSNPYYGYSYERLVHTAEHELGHAIGLDHTDEKSVMQPAGSFYGIQEEDVANLRKIYETSE

Sequences:

>Translated_233_residues
MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNGDFQGALKQAERSVKIGQQSIDQWEKTGQLPKLSQTDSH
QHSEGRWPQVSARIYLDPQMDSRFQEAYLEAIQNWNQTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQ
FLSVTVRLNHYYLSNPYYGYSYERLVHTAEHELGHAIGLDHTDEKSVMQPAGSFYGIQEEDVANLRKIYETSE
>Mature_233_residues
MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNGDFQGALKQAERSVKIGQQSIDQWEKTGQLPKLSQTDSH
QHSEGRWPQVSARIYLDPQMDSRFQEAYLEAIQNWNQTGAFNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQ
FLSVTVRLNHYYLSNPYYGYSYERLVHTAEHELGHAIGLDHTDEKSVMQPAGSFYGIQEEDVANLRKIYETSE

Specific function: Unknown

COG id: COG5549

COG function: function code O; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26785; Mature: 26785

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNGDFQGALKQAERSVKIGQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SIDQWEKTGQLPKLSQTDSHQHSEGRWPQVSARIYLDPQMDSRFQEAYLEAIQNWNQTGA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
FNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNPYYGY
EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEEEEEEEEEEECCCCCCC
SYERLVHTAEHELGHAIGLDHTDEKSVMQPAGSFYGIQEEDVANLRKIYETSE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWLFRLIGAFFSFVWRLFWRLVWIVVLLCVLAFGLLWYLNGDFQGALKQAERSVKIGQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SIDQWEKTGQLPKLSQTDSHQHSEGRWPQVSARIYLDPQMDSRFQEAYLEAIQNWNQTGA
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
FNFELVTESSKADITATEMNDGGTPVAGEAESQTNLLTGQFLSVTVRLNHYYLSNPYYGY
EEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCEEEEEEEEEEEEEECCCCCCC
SYERLVHTAEHELGHAIGLDHTDEKSVMQPAGSFYGIQEEDVANLRKIYETSE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA