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The map label for this gene is xynC [H]

Identifier: 169832721

GI number: 169832721

Start: 656115

End: 656894

Strand: Direct

Name: xynC [H]

Synonym: SPH_0707

Alternate gene names: 169832721

Gene position: 656115-656894 (Clockwise)

Preceding gene: 169833215

Following gene: 169834190

Centisome position: 29.22

GC content: 43.33

Gene sequence:

>780_bases
ATGGCAGTAATGAAAATTGAGTATTACTCACAAGTATTGGATATGGAGTGGGGAGTGAATGTCCTCTACCCTGATGCCAA
TCGAGTAGAAGAACCAGAGTGTAAAGATATTCCCGTCTTGTACCTCTTGCATGGGATGTCTGGCAATCATAATAGTTGGC
TCAAGCGGACCAATGTAGAACGCTTGCTTCGGGGGACTAATCTCATCGTTGTCATGCCCAATACCAGCAACGGTTGGTAT
ACCGATACCCAGTATGGTTTTGACTATTACACAGCTCTAGCAGAGGAATTGCCAGAGGTTCTAAAACGCTTCTTCCCTAA
TATGACCAGTAAGCGTGAAAAGACCTTTATCGCTGGCCTCTCTATGGGAGGTTATGGCTGTTTCAAATTGGCTCTTGCTA
CAAATCGTTTCTCTCACGCAGCTAGTTTTTCAGGCGCCCTGAGCTTTCAAGATTTTTCTCCTGAAAGCCAAAATTTGGGA
ACACCGGCTTATTGGAGAGGTGTGTTTGGGGAGATTAAAAATTGGACAGCTAGCCCTTATTCTCTTGAAAGTTTGGCTAA
AAAATCGGATAAAAAGACCAAGCTCTGGGCTTGGTGTGGCGAGCAGGATTTCTTGTACGAAGCCAATAATCTAGCAGTGA
AAAATCTTAAAGTACTGGGCTTTGATGTGACCTATAGCCATAGCGCTGGAACTCACGAGTGGTACTACTGGGAAAAACAA
TTGGAACGGTTTTTAAAAACCCTACCGATTGATTTCAAATTAGAAGAGAGATTGAGCTAA

Upstream 100 bases:

>100_bases
CCATTCTACCAGTAGTCATGGAAGCGAAATAATCGTTGAAATAAACAGGGAGAAAGTCGAGTTTCGGCTTTTTCTTATCG
GAAAATAGAAGGAGAAAATC

Downstream 100 bases:

>100_bases
TTTTTTATAAATAAACCACCATTTATAGTTATTCTTGGCTTAAAAACATTGATGGAAGTCTATTTTCGCTAGACTTTTTA
ATCGAAAATAGTAAAATAGT

Product: tributyrin esterase

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECKDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWY
TDTQYGFDYYTALAEELPEVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLALATNRFSHAASFSGALSFQDFSPESQNLG
TPAYWRGVFGEIKNWTASPYSLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKVLGFDVTYSHSAGTHEWYYWEKQ
LERFLKTLPIDFKLEERLS

Sequences:

>Translated_259_residues
MAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECKDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWY
TDTQYGFDYYTALAEELPEVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLALATNRFSHAASFSGALSFQDFSPESQNLG
TPAYWRGVFGEIKNWTASPYSLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKVLGFDVTYSHSAGTHEWYYWEKQ
LERFLKTLPIDFKLEERLS
>Mature_258_residues
AVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECKDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYT
DTQYGFDYYTALAEELPEVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLALATNRFSHAASFSGALSFQDFSPESQNLGT
PAYWRGVFGEIKNWTASPYSLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKVLGFDVTYSHSAGTHEWYYWEKQL
ERFLKTLPIDFKLEERLS

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 29867; Mature: 29736

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECKDIPVLYLLHGMSGNHNSWLKRTNVE
CEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCHH
RLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPEVLKRFFPNMTSKREKTFIAGL
HHHCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
SMGGYGCFKLALATNRFSHAASFSGALSFQDFSPESQNLGTPAYWRGVFGEIKNWTASPY
CCCCCHHEEEEHHHCCHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
SLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKVLGFDVTYSHSAGTHEWYYWEKQ
CHHHHHHCCCCCEEEEEEECCCCEEEECCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHH
LERFLKTLPIDFKLEERLS
HHHHHHHCCCCEEEHHHCC
>Mature Secondary Structure 
AVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECKDIPVLYLLHGMSGNHNSWLKRTNVE
EEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCHH
RLLRGTNLIVVMPNTSNGWYTDTQYGFDYYTALAEELPEVLKRFFPNMTSKREKTFIAGL
HHHCCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
SMGGYGCFKLALATNRFSHAASFSGALSFQDFSPESQNLGTPAYWRGVFGEIKNWTASPY
CCCCCHHEEEEHHHCCHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
SLESLAKKSDKKTKLWAWCGEQDFLYEANNLAVKNLKVLGFDVTYSHSAGTHEWYYWEKQ
CHHHHHHCCCCCEEEEEEECCCCEEEECCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHH
LERFLKTLPIDFKLEERLS
HHHHHHHCCCCEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]