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The map label for this gene is ynbB [H]

Identifier: 169824443

GI number: 169824443

Start: 811850

End: 813124

Strand: Direct

Name: ynbB [H]

Synonym: FMG_0746

Alternate gene names: 169824443

Gene position: 811850-813124 (Clockwise)

Preceding gene: 169824442

Following gene: 169824445

Centisome position: 45.16

GC content: 31.37

Gene sequence:

>1275_bases
ATGATAAGAGATAAAATAAAAGAATGGTACGGTATAGATGATTATAGTTTTGATACAGTTATGGAAAGTGATTATCTACT
ATCCGAAAAATTTAAAGAATTAGAAAACTTGGAATTTGTTAATCAACTTAAAGTTTTGAAGGCTTTCCAAGATAATAAGT
TACAAGCTACTGATTTTGCATCAACAACGGGTTATGGATATGGTGATGTTGGTAGAGATAAATGTGAAGCGATATTTAGA
GATATTTTCAAAGCTGAGGATTGTTTAGTTAGACCGTCTATTGCTTCTGGAACTCATGCACTTAGTCTATTGATGAAAGG
TGCATTATTACCTGGAGATAAATTATTATATATCACAGGATTACCTTACGATACATTACAAGAAGTTATAGGAATCGAAG
GCAATTCTCCGTGTAATTTGAAAGAATTTGGAATTGATTTTGATTATGTAGATTTGGTAGATAATGAAATAAATTTGAAA
GCTGTGGAATCAAAGATAGACTCTACTGTAAAAATGATAGCCATACAAAGATCAACAGGTTATAGTTTACGAAATGCTAT
AAATATTGAACAAATCGAACGAGCAGCTCAATTTATCAAAGAGAAATTTCCTGAAATTATAATCATGGTTGATAATTGTT
ATGGAGAATTCACTGAATATAAAGAACCTATTGAGGTAGGATGTGATGTTATTGCTGGATCTTTGATAAAAAATCCAGGT
GGTGGAATAGCTCTTTCAGGAGGATATATTGCTGGTAAAAAGTCTATTATCGATAGGGTAGCGAATACTTTAACAGCACC
AGGAATAGGAAAGGAAGTAGGAATAACTTTTGGTACGACTCGAAACACATTACAAGGCTTATTTTTAGCTCCTAAAATTA
CTATTGAAGCAATGAAGTCGGCATTATTATTTTCTCATGTTTTCAAAAAATTGGGATTTAAAACAATTCCTGATGTAGAA
GATAAAAGAAGTGATATAATTTGTGCGATTATTCTTAAAAACGAAGAAAGAGTTGTTGAGTTTTGTAGATCCATTCAAGA
GTCATCTGTTGTAGATTCACATGTAGTTCCTTATCCTTGGGATATGCCAGGTTACGATGATAAAGTAATAATGGCATCAG
GAAGCTTTATAGATGGTTCTAGTATAGAGATTTCAGCAGATGGACCTTTAAGAGAACCATATGTAGCTTATTTTCAAGGA
TCTTTAACCTATAAACAAGCATTACTTGCTTGCATGAAAGTTGTTATGAATTTAAAAAATAAAAACTTAATATAA

Upstream 100 bases:

>100_bases
TTTAGACAAGATAAAAGAATTCATTGGATGAATTTGAAAGACTTTAGAGAATTTGAAGACATCGAACAAATTTGTTTGAA
AAATGTGAAAGAATGGTTAT

Downstream 100 bases:

>100_bases
AATAATAAAAGCCTTCTATTTATAACAATAATTAGAAGGCTTGTTTTTTTAATAAATTGTTCTGTAAAGGCCGATAACTT
TTCCTAAAATCTCAACATCT

Product: putative aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MIRDKIKEWYGIDDYSFDTVMESDYLLSEKFKELENLEFVNQLKVLKAFQDNKLQATDFASTTGYGYGDVGRDKCEAIFR
DIFKAEDCLVRPSIASGTHALSLLMKGALLPGDKLLYITGLPYDTLQEVIGIEGNSPCNLKEFGIDFDYVDLVDNEINLK
AVESKIDSTVKMIAIQRSTGYSLRNAINIEQIERAAQFIKEKFPEIIIMVDNCYGEFTEYKEPIEVGCDVIAGSLIKNPG
GGIALSGGYIAGKKSIIDRVANTLTAPGIGKEVGITFGTTRNTLQGLFLAPKITIEAMKSALLFSHVFKKLGFKTIPDVE
DKRSDIICAIILKNEERVVEFCRSIQESSVVDSHVVPYPWDMPGYDDKVIMASGSFIDGSSIEISADGPLREPYVAYFQG
SLTYKQALLACMKVVMNLKNKNLI

Sequences:

>Translated_424_residues
MIRDKIKEWYGIDDYSFDTVMESDYLLSEKFKELENLEFVNQLKVLKAFQDNKLQATDFASTTGYGYGDVGRDKCEAIFR
DIFKAEDCLVRPSIASGTHALSLLMKGALLPGDKLLYITGLPYDTLQEVIGIEGNSPCNLKEFGIDFDYVDLVDNEINLK
AVESKIDSTVKMIAIQRSTGYSLRNAINIEQIERAAQFIKEKFPEIIIMVDNCYGEFTEYKEPIEVGCDVIAGSLIKNPG
GGIALSGGYIAGKKSIIDRVANTLTAPGIGKEVGITFGTTRNTLQGLFLAPKITIEAMKSALLFSHVFKKLGFKTIPDVE
DKRSDIICAIILKNEERVVEFCRSIQESSVVDSHVVPYPWDMPGYDDKVIMASGSFIDGSSIEISADGPLREPYVAYFQG
SLTYKQALLACMKVVMNLKNKNLI
>Mature_424_residues
MIRDKIKEWYGIDDYSFDTVMESDYLLSEKFKELENLEFVNQLKVLKAFQDNKLQATDFASTTGYGYGDVGRDKCEAIFR
DIFKAEDCLVRPSIASGTHALSLLMKGALLPGDKLLYITGLPYDTLQEVIGIEGNSPCNLKEFGIDFDYVDLVDNEINLK
AVESKIDSTVKMIAIQRSTGYSLRNAINIEQIERAAQFIKEKFPEIIIMVDNCYGEFTEYKEPIEVGCDVIAGSLIKNPG
GGIALSGGYIAGKKSIIDRVANTLTAPGIGKEVGITFGTTRNTLQGLFLAPKITIEAMKSALLFSHVFKKLGFKTIPDVE
DKRSDIICAIILKNEERVVEFCRSIQESSVVDSHVVPYPWDMPGYDDKVIMASGSFIDGSSIEISADGPLREPYVAYFQG
SLTYKQALLACMKVVMNLKNKNLI

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 47068; Mature: 47068

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDKIKEWYGIDDYSFDTVMESDYLLSEKFKELENLEFVNQLKVLKAFQDNKLQATDFA
CCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
STTGYGYGDVGRDKCEAIFRDIFKAEDCLVRPSIASGTHALSLLMKGALLPGDKLLYITG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEC
LPYDTLQEVIGIEGNSPCNLKEFGIDFDYVDLVDNEINLKAVESKIDSTVKMIAIQRSTG
CCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHEEEEEEECCCC
YSLRNAINIEQIERAAQFIKEKFPEIIIMVDNCYGEFTEYKEPIEVGCDVIAGSLIKNPG
CHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCC
GGIALSGGYIAGKKSIIDRVANTLTAPGIGKEVGITFGTTRNTLQGLFLAPKITIEAMKS
CCEEEECCEECCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHEEECCHHHHHHHHH
ALLFSHVFKKLGFKTIPDVEDKRSDIICAIILKNEERVVEFCRSIQESSVVDSHVVPYPW
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
DMPGYDDKVIMASGSFIDGSSIEISADGPLREPYVAYFQGSLTYKQALLACMKVVMNLKN
CCCCCCCEEEEEECCEECCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
KNLI
CCCC
>Mature Secondary Structure
MIRDKIKEWYGIDDYSFDTVMESDYLLSEKFKELENLEFVNQLKVLKAFQDNKLQATDFA
CCHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
STTGYGYGDVGRDKCEAIFRDIFKAEDCLVRPSIASGTHALSLLMKGALLPGDKLLYITG
CCCCCCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEC
LPYDTLQEVIGIEGNSPCNLKEFGIDFDYVDLVDNEINLKAVESKIDSTVKMIAIQRSTG
CCHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHEEEEEEECCCC
YSLRNAINIEQIERAAQFIKEKFPEIIIMVDNCYGEFTEYKEPIEVGCDVIAGSLIKNPG
CHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCC
GGIALSGGYIAGKKSIIDRVANTLTAPGIGKEVGITFGTTRNTLQGLFLAPKITIEAMKS
CCEEEECCEECCHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHEEECCHHHHHHHHH
ALLFSHVFKKLGFKTIPDVEDKRSDIICAIILKNEERVVEFCRSIQESSVVDSHVVPYPW
HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
DMPGYDDKVIMASGSFIDGSSIEISADGPLREPYVAYFQGSLTYKQALLACMKVVMNLKN
CCCCCCCEEEEEECCEECCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
KNLI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]