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The map label for this gene is ylbH [H]

Identifier: 169824373

GI number: 169824373

Start: 740033

End: 740593

Strand: Direct

Name: ylbH [H]

Synonym: FMG_0676

Alternate gene names: 169824373

Gene position: 740033-740593 (Clockwise)

Preceding gene: 169824372

Following gene: 169824374

Centisome position: 41.17

GC content: 27.63

Gene sequence:

>561_bases
ATGAAAGTTATTTCAGGAAAAATGAGAGGTATGAACTTAAATACTGATTTAGATAGATTTACAAGACCAACTGAAGGCAA
AATAAAAGAAGCTATATTTAGCGTGATATTTCAGGTAAAACCAAATTCTAAAGCATTGGATTTATTTGCTGGAAGTGGAG
CAGTTGGGATAGAATTCTTAAGTAGAGGTTGTGATTTGGTAGTATTTAGTGAAGCTTCTAGTGATAATATAAGATGCATC
AATGAAAATATTGAACATACGAAATCACAAGAATTTACAAAAGTATTTAAGGGAGATTTTAAGAAAAATATATTGAATAT
CAAGAGGCAAGGAATAAAATTCGACTATGTTTTTATAGATCCTCCATACGAAAGACTAAATTATTACAAAGAATCAATTC
AAATGCTCTTAGATAATGATATTTTGAATGATGATTGTCTTGTGATATTAGAATCAGAAAAAGAGTTGCCAGATGAATAT
TTTGGTTCTTTGAATTTGGAAAAGCAAAAACAATATGGAAAAAAGAAAAATATTTATTTTTTGAGGAAAGATAATGAATA
A

Upstream 100 bases:

>100_bases
ATGATTTGTTAAAAAATAAAGAATATAGTTATTTAAATGAAGAAATAAACAAATTTAAAGATAAATTATTAGAAAATGTT
ATTTTTAATTGAGGTGAGAA

Downstream 100 bases:

>100_bases
AACAAAAGTTTTATATCCAGGTAGTTTTGATCCGATAACAAATGGGCACATGGATATCATTGAAAGAAGCGCAAAGATTT
TTGAAGAAGTAAATGTAGCT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKVISGKMRGMNLNTDLDRFTRPTEGKIKEAIFSVIFQVKPNSKALDLFAGSGAVGIEFLSRGCDLVVFSEASSDNIRCI
NENIEHTKSQEFTKVFKGDFKKNILNIKRQGIKFDYVFIDPPYERLNYYKESIQMLLDNDILNDDCLVILESEKELPDEY
FGSLNLEKQKQYGKKKNIYFLRKDNE

Sequences:

>Translated_186_residues
MKVISGKMRGMNLNTDLDRFTRPTEGKIKEAIFSVIFQVKPNSKALDLFAGSGAVGIEFLSRGCDLVVFSEASSDNIRCI
NENIEHTKSQEFTKVFKGDFKKNILNIKRQGIKFDYVFIDPPYERLNYYKESIQMLLDNDILNDDCLVILESEKELPDEY
FGSLNLEKQKQYGKKKNIYFLRKDNE
>Mature_186_residues
MKVISGKMRGMNLNTDLDRFTRPTEGKIKEAIFSVIFQVKPNSKALDLFAGSGAVGIEFLSRGCDLVVFSEASSDNIRCI
NENIEHTKSQEFTKVFKGDFKKNILNIKRQGIKFDYVFIDPPYERLNYYKESIQMLLDNDILNDDCLVILESEKELPDEY
FGSLNLEKQKQYGKKKNIYFLRKDNE

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=186, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21546; Mature: 21546

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVISGKMRGMNLNTDLDRFTRPTEGKIKEAIFSVIFQVKPNSKALDLFAGSGAVGIEFL
CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHH
SRGCDLVVFSEASSDNIRCINENIEHTKSQEFTKVFKGDFKKNILNIKRQGIKFDYVFID
HCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
PPYERLNYYKESIQMLLDNDILNDDCLVILESEKELPDEYFGSLNLEKQKQYGKKKNIYF
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCHHHHHCCCCCCEEE
LRKDNE
EEECCC
>Mature Secondary Structure
MKVISGKMRGMNLNTDLDRFTRPTEGKIKEAIFSVIFQVKPNSKALDLFAGSGAVGIEFL
CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHEEECCCCCEEEEEECCCCHHHHHH
SRGCDLVVFSEASSDNIRCINENIEHTKSQEFTKVFKGDFKKNILNIKRQGIKFDYVFID
HCCCCEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
PPYERLNYYKESIQMLLDNDILNDDCLVILESEKELPDEYFGSLNLEKQKQYGKKKNIYF
CCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCHHHHHCCCCCCEEE
LRKDNE
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]