| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is recG [H]
Identifier: 169824372
GI number: 169824372
Start: 737988
End: 740024
Strand: Direct
Name: recG [H]
Synonym: FMG_0675
Alternate gene names: 169824372
Gene position: 737988-740024 (Clockwise)
Preceding gene: 169824371
Following gene: 169824373
Centisome position: 41.05
GC content: 28.18
Gene sequence:
>2037_bases ATGCAATTATCAGAAATAAAAGGAATAGGAAAGAAAAAATTAGAAGTATTAAACTCTATGGGTATTATCAATATTAATGA TTTGTTGAATTATTTTCCTTACAGATACGAAAACAGATCTATTATTAAAAACATTATTGATACGAGAGATGAAGAAAATT GTGTTATAAAGGTAAAGTTTATTTCTAAACCTATAACTAAATATTTAAGAAGAAATCTAAACTTAACAACTGCTATAGCA TTTGATGATACTTCAAAAATTAGCGTGTCATGGTTTAATCAACCTTTTATTAGAAATCAAATTTTGCCAAATACAACTTA TTATCTATATGGAAAGATACAAAGAGTCCAAAACCAATTTAAAATATCTTCACCAATATTAAGTAAAACTTTTGGCGGGA AATTGGGCATAATTTATCCAATTTACAAAGTTAAAAAAGGCATAACAAATAACGATATGATTAAGTTTGTTGATTTTGCT ATTAAACATTGTATTGATGAAATAAAAAATGTTATTCCGTATAGTATGATTAAAAACTATGATATTGAAAATAAAAGAAA TGCGATAAAAAACATTCATAAACCAGTTGATTACATGCAATTTAAAAGAGCTAGAACTGCTCTTGTTCTTGAAGAAGTTA TTATAATGCAACTTGCAATGAAATCGATGAAAACATCACTCAACCAACAAAATTATATAAAACTTCAATCAGATGAAAGT ATAAATATTTTCATAAATTCTTTAAAATTTGAACTTACAAAAGGACAACTTGAAGCAATAAAAGATATCGAAATGGACAT GACATCTGAAAAGAGAATGAATAGACTGGTTCAAGGTGATGTTGGAAGTGGCAAGACAATAGTAGCGGAGGCAGCGATTT TTAAATCACATTCTAGTGGTTACCAATCTGCCTTTATGGCTCCTACAGATATATTAGCGACACAACATTATGAAAGCTTG TCAGAAGATTTTTCAAAATTTGGAATAAAAGTTTGCTTATTGAAATCTGACTTAACAAAATCAGAAAAAGATTTGGTTCT AAAAGGAATAAAATCAGGATATTTCGATGTTATAGTAGGAACCCATGCAATAATACAAGATTTTGTTGAATTTAAAAGAC TTGGACTTGTAATTACTGATGAACAACATAGATTTGGAGTGGGTCAAAGAAAAAAAATTTCTGACAAAGGTCAAAATCCA GATGTTCTTGTAATGACAGCTACTCCAATTCCTAGAACTTTAGCACTTTCTTATTACGGAGATTTAGATATATCAACAAT AAATGAAATGCCTAAAGGAAGAAAAATAATAGAAACATATTCTGTTGGCTTTAGCTACGAAAAAAGGATAGCGGATTTTA TAAGAAAACAAGTTGATAATGGGTTTCAGGCATATATCGTTTGTCCATTGATAGAAGAATCTGAATCTTTAGAATTAGAA AATGTAACGGAACTTTACAATAGGCTTACTGGTGAATATTTTTCAGATATAAATGTTGGAATGTTACATGGAAAAATGAA ATCCTCGGAAAAAGAAGAAACTATGAAAGATTTTGTAGACGGTAAAACAAAAATACTTGTATCTACAACTGTTATTGAGG TTGGAGTTAATGTTAGAAAAGCAAATGTAATAGTTATTTATAACGCTGAAAGATTTGGACTTTCACAACTTCATCAACTT AGGGGAAGAGTAGGTAGATCATCAGATCAATCATATTGTATACTTATCAATAAAGCACATTCTGATGAGCAAATGGAAAG AATGAATATTATGGTCAAGACAAATAGCGGATTTGAACTATCACAAAAAGATTTGATGATGAGAGGTAGTGGTGATTTAT TAGGAACTAGACAATCAGGAATACCGCTTTTAAATATCGCAGATCTTGAAAAAGATTATGATTTGATAGAAAAAGCAGCG GTGATAACTGATTATATCTACACTAATGATTTGTTAAAAAATAAAGAATATAGTTATTTAAATGAAGAAATAAACAAATT TAAAGATAAATTATTAGAAAATGTTATTTTTAATTGA
Upstream 100 bases:
>100_bases TCAATAGAATAACTCCTTACAAAGAATAACAAATAATAGATCGATTTTATCGGTCTATTATTTGTATTACTAATGTAAGG ATTTTTTTGTGTGGTGAATT
Downstream 100 bases:
>100_bases GGTGAGAAATGAAAGTTATTTCAGGAAAAATGAGAGGTATGAACTTAAATACTGATTTAGATAGATTTACAAGACCAACT GAAGGCAAAATAAAAGAAGC
Product: ATP-dependent helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MQLSEIKGIGKKKLEVLNSMGIININDLLNYFPYRYENRSIIKNIIDTRDEENCVIKVKFISKPITKYLRRNLNLTTAIA FDDTSKISVSWFNQPFIRNQILPNTTYYLYGKIQRVQNQFKISSPILSKTFGGKLGIIYPIYKVKKGITNNDMIKFVDFA IKHCIDEIKNVIPYSMIKNYDIENKRNAIKNIHKPVDYMQFKRARTALVLEEVIIMQLAMKSMKTSLNQQNYIKLQSDES INIFINSLKFELTKGQLEAIKDIEMDMTSEKRMNRLVQGDVGSGKTIVAEAAIFKSHSSGYQSAFMAPTDILATQHYESL SEDFSKFGIKVCLLKSDLTKSEKDLVLKGIKSGYFDVIVGTHAIIQDFVEFKRLGLVITDEQHRFGVGQRKKISDKGQNP DVLVMTATPIPRTLALSYYGDLDISTINEMPKGRKIIETYSVGFSYEKRIADFIRKQVDNGFQAYIVCPLIEESESLELE NVTELYNRLTGEYFSDINVGMLHGKMKSSEKEETMKDFVDGKTKILVSTTVIEVGVNVRKANVIVIYNAERFGLSQLHQL RGRVGRSSDQSYCILINKAHSDEQMERMNIMVKTNSGFELSQKDLMMRGSGDLLGTRQSGIPLLNIADLEKDYDLIEKAA VITDYIYTNDLLKNKEYSYLNEEINKFKDKLLENVIFN
Sequences:
>Translated_678_residues MQLSEIKGIGKKKLEVLNSMGIININDLLNYFPYRYENRSIIKNIIDTRDEENCVIKVKFISKPITKYLRRNLNLTTAIA FDDTSKISVSWFNQPFIRNQILPNTTYYLYGKIQRVQNQFKISSPILSKTFGGKLGIIYPIYKVKKGITNNDMIKFVDFA IKHCIDEIKNVIPYSMIKNYDIENKRNAIKNIHKPVDYMQFKRARTALVLEEVIIMQLAMKSMKTSLNQQNYIKLQSDES INIFINSLKFELTKGQLEAIKDIEMDMTSEKRMNRLVQGDVGSGKTIVAEAAIFKSHSSGYQSAFMAPTDILATQHYESL SEDFSKFGIKVCLLKSDLTKSEKDLVLKGIKSGYFDVIVGTHAIIQDFVEFKRLGLVITDEQHRFGVGQRKKISDKGQNP DVLVMTATPIPRTLALSYYGDLDISTINEMPKGRKIIETYSVGFSYEKRIADFIRKQVDNGFQAYIVCPLIEESESLELE NVTELYNRLTGEYFSDINVGMLHGKMKSSEKEETMKDFVDGKTKILVSTTVIEVGVNVRKANVIVIYNAERFGLSQLHQL RGRVGRSSDQSYCILINKAHSDEQMERMNIMVKTNSGFELSQKDLMMRGSGDLLGTRQSGIPLLNIADLEKDYDLIEKAA VITDYIYTNDLLKNKEYSYLNEEINKFKDKLLENVIFN >Mature_678_residues MQLSEIKGIGKKKLEVLNSMGIININDLLNYFPYRYENRSIIKNIIDTRDEENCVIKVKFISKPITKYLRRNLNLTTAIA FDDTSKISVSWFNQPFIRNQILPNTTYYLYGKIQRVQNQFKISSPILSKTFGGKLGIIYPIYKVKKGITNNDMIKFVDFA IKHCIDEIKNVIPYSMIKNYDIENKRNAIKNIHKPVDYMQFKRARTALVLEEVIIMQLAMKSMKTSLNQQNYIKLQSDES INIFINSLKFELTKGQLEAIKDIEMDMTSEKRMNRLVQGDVGSGKTIVAEAAIFKSHSSGYQSAFMAPTDILATQHYESL SEDFSKFGIKVCLLKSDLTKSEKDLVLKGIKSGYFDVIVGTHAIIQDFVEFKRLGLVITDEQHRFGVGQRKKISDKGQNP DVLVMTATPIPRTLALSYYGDLDISTINEMPKGRKIIETYSVGFSYEKRIADFIRKQVDNGFQAYIVCPLIEESESLELE NVTELYNRLTGEYFSDINVGMLHGKMKSSEKEETMKDFVDGKTKILVSTTVIEVGVNVRKANVIVIYNAERFGLSQLHQL RGRVGRSSDQSYCILINKAHSDEQMERMNIMVKTNSGFELSQKDLMMRGSGDLLGTRQSGIPLLNIADLEKDYDLIEKAA VITDYIYTNDLLKNKEYSYLNEEINKFKDKLLENVIFN
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=673, Percent_Identity=34.3239227340267, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI1787357, Length=388, Percent_Identity=36.5979381443299, Blast_Score=256, Evalue=3e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 77611; Mature: 77611
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSEIKGIGKKKLEVLNSMGIININDLLNYFPYRYENRSIIKNIIDTRDEENCVIKVKF CCCHHHCCCCHHHHHHHHCCCCEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEE ISKPITKYLRRNLNLTTAIAFDDTSKISVSWFNQPFIRNQILPNTTYYLYGKIQRVQNQF HHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHCCCCCCCEEEEEHHHHHHHHHH KISSPILSKTFGGKLGIIYPIYKVKKGITNNDMIKFVDFAIKHCIDEIKNVIPYSMIKNY HCCCCHHHHHCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC DIENKRNAIKNIHKPVDYMQFKRARTALVLEEVIIMQLAMKSMKTSLNQQNYIKLQSDES CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC INIFINSLKFELTKGQLEAIKDIEMDMTSEKRMNRLVQGDVGSGKTIVAEAAIFKSHSSG EEEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCCC YQSAFMAPTDILATQHYESLSEDFSKFGIKVCLLKSDLTKSEKDLVLKGIKSGYFDVIVG CCHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCEEHHHH THAIIQDFVEFKRLGLVITDEQHRFGVGQRKKISDKGQNPDVLVMTATPIPRTLALSYYG HHHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC DLDISTINEMPKGRKIIETYSVGFSYEKRIADFIRKQVDNGFQAYIVCPLIEESESLELE CCCHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHH NVTELYNRLTGEYFSDINVGMLHGKMKSSEKEETMKDFVDGKTKILVSTTVIEVGVNVRK HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCEEEE ANVIVIYNAERFGLSQLHQLRGRVGRSSDQSYCILINKAHSDEQMERMNIMVKTNSGFEL EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHEEEEEEECCCCCC SQKDLMMRGSGDLLGTRQSGIPLLNIADLEKDYDLIEKAAVITDYIYTNDLLKNKEYSYL CHHHHEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH NEEINKFKDKLLENVIFN HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQLSEIKGIGKKKLEVLNSMGIININDLLNYFPYRYENRSIIKNIIDTRDEENCVIKVKF CCCHHHCCCCHHHHHHHHCCCCEEHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEE ISKPITKYLRRNLNLTTAIAFDDTSKISVSWFNQPFIRNQILPNTTYYLYGKIQRVQNQF HHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHCCCCCCCEEEEEHHHHHHHHHH KISSPILSKTFGGKLGIIYPIYKVKKGITNNDMIKFVDFAIKHCIDEIKNVIPYSMIKNY HCCCCHHHHHCCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC DIENKRNAIKNIHKPVDYMQFKRARTALVLEEVIIMQLAMKSMKTSLNQQNYIKLQSDES CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC INIFINSLKFELTKGQLEAIKDIEMDMTSEKRMNRLVQGDVGSGKTIVAEAAIFKSHSSG EEEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHCCCCC YQSAFMAPTDILATQHYESLSEDFSKFGIKVCLLKSDLTKSEKDLVLKGIKSGYFDVIVG CCHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCCEEHHHH THAIIQDFVEFKRLGLVITDEQHRFGVGQRKKISDKGQNPDVLVMTATPIPRTLALSYYG HHHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEC DLDISTINEMPKGRKIIETYSVGFSYEKRIADFIRKQVDNGFQAYIVCPLIEESESLELE CCCHHHHHCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHH NVTELYNRLTGEYFSDINVGMLHGKMKSSEKEETMKDFVDGKTKILVSTTVIEVGVNVRK HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCEEEE ANVIVIYNAERFGLSQLHQLRGRVGRSSDQSYCILINKAHSDEQMERMNIMVKTNSGFEL EEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHEEEEEEECCCCCC SQKDLMMRGSGDLLGTRQSGIPLLNIADLEKDYDLIEKAAVITDYIYTNDLLKNKEYSYL CHHHHEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH NEEINKFKDKLLENVIFN HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]