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The map label for this gene is ycdQ [C]

Identifier: 169630911

GI number: 169630911

Start: 3878061

End: 3879509

Strand: Reverse

Name: ycdQ [C]

Synonym: MAB_3831c

Alternate gene names: 169630911

Gene position: 3879509-3878061 (Counterclockwise)

Preceding gene: 169630912

Following gene: 169630910

Centisome position: 76.56

GC content: 66.8

Gene sequence:

>1449_bases
ATGACCACGAGCGACGAGCAGGCGCAGCACGCGGCTCCATCGCAGGAGCGGCTACCCGACGGATTCGCGGTTCAGGTGGA
CCGTCGAGTCCGCGTGCTCGACGAGGGTTCGGCGCTGCTGGGCGGCTCTCCGACCCGGCTGCTGCGGTTGGCTCCGGCGG
CGCGGACACTGCTGTCCGGTGGACGGCTCGAGGTCCGTGACGCGACCAGCGCGCAGTTGGCGCGGACGCTACTGGATGCC
ACCGTGGCGCATCCCCGCCCGGTGGGCGGGCCCGGCTACCGTGACGTGACTGTTGTTATTCCATGTCGAGACAATGGCTT
TGGGCTACGCCGCCTGTTGCGGGCGCTGCGTGGCATGCGGGTGATCGTCGTCGACGACGGCTCCACCATCCCGATCGTCG
AGAGCGATCTAGAAGGCATGCATTGTCACGTGGAGGTGGTGCGCCACGCCGACAGTCAAGGTCCGGCGGCGGCTCGCAAC
ACCGGTCTGAAGCTCGCGACGACGGACTTCGTTGCGTTCCTCGATTCGGATGTGGTGCCACGGCGCGGTTGGCTCGAGGC
GCTGTTGGGGCACTTCAGTGATCCGGCGGTGGCCTTGGTCGCGCCGCGCATCGTGGGATTGGTGTTGAGTGACAACGCTA
TTGCCCGGTACGAGGCGGTACGTTCCTCGCTGGATCTCGGCCTGCGGGAGGCTCCTGTGGTGCCGTACGGTCCGGTGTCG
TACGTCCCGAGTGCGGCGATTGTGGTCCGGCGGTCCGCGATCAACGAGATAGGCGGATTCGACGAAGCGCTGCAGTGCGG
TGAGGACGTGGACCTGTGCTGGCGGCTGATCGAGGCGGGCTCGCGGCTTCGGTATGAGCCGGTGTCTCATGTGGCCCACG
ACCATCGGCTCACTCTCCGAGAATGGTTTGCGCGCAAGGCCTTCTACGGAAAGAGCGCGGCCCCGCTGTCGACCCGTCAT
CCCGACAAGGTGGCGCCGATGGTCATCTCCCGATGGACACTGCTGGTATGGATCCTCGCGGCGGTGGGGTCGGGAATGGG
CTACCTGGCCGCGGTGGGCATGGCCGCATTGGCGGCCGGGAGAGTGGCCCGGACCCTGCGAGGCGTGGATACCCCGCCAC
GTGACGTAGTTCGGGTGGCCGCTCAAGGAGTGGGCGGCGCCGCGCTGCAGATCGCGTCCGCGCTGTGTCGTCACTATTGG
CCGTTGGCGTTGTTCGCGGCCGCGCTGTCGCGGCGCAGCAGGCAGGTACTGGTGGTTGCCGCCATTGTCGACGGCGTCGT
GGACTGGATGAAACGCAACGACAGTTCGGCCTCTCCCGATGACCGCATCGGTCTTATCGAGTACGTACTGCTGAAGCGCC
TGGACGATATTGCCTACGGGATTGGGCTGTGGTCCGGAATCGTGCGGGAGCGTGATCTCGGTGCGCTCCGACCGGAACTA
CGGCCCTGA

Upstream 100 bases:

>100_bases
CGGCCAGCAGCCAGGACGGCGCACGGATGCTGGAAACGATGACTCGACAATGCGCCGACGCGGTGCGGCGGTGGACACCT
GATGCCGACGGGCGGCTGGT

Downstream 100 bases:

>100_bases
GTAGGCCGATCCACGCCGATGCGCTCATCGTGGGCGCAGGAAGCGCGGGTTCGATTCTGGCAGGCCGCCTTTCTGAAGAC
CCGTCGTTTCGAGTGGTGCT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MTTSDEQAQHAAPSQERLPDGFAVQVDRRVRVLDEGSALLGGSPTRLLRLAPAARTLLSGGRLEVRDATSAQLARTLLDA
TVAHPRPVGGPGYRDVTVVIPCRDNGFGLRRLLRALRGMRVIVVDDGSTIPIVESDLEGMHCHVEVVRHADSQGPAAARN
TGLKLATTDFVAFLDSDVVPRRGWLEALLGHFSDPAVALVAPRIVGLVLSDNAIARYEAVRSSLDLGLREAPVVPYGPVS
YVPSAAIVVRRSAINEIGGFDEALQCGEDVDLCWRLIEAGSRLRYEPVSHVAHDHRLTLREWFARKAFYGKSAAPLSTRH
PDKVAPMVISRWTLLVWILAAVGSGMGYLAAVGMAALAAGRVARTLRGVDTPPRDVVRVAAQGVGGAALQIASALCRHYW
PLALFAAALSRRSRQVLVVAAIVDGVVDWMKRNDSSASPDDRIGLIEYVLLKRLDDIAYGIGLWSGIVRERDLGALRPEL
RP

Sequences:

>Translated_482_residues
MTTSDEQAQHAAPSQERLPDGFAVQVDRRVRVLDEGSALLGGSPTRLLRLAPAARTLLSGGRLEVRDATSAQLARTLLDA
TVAHPRPVGGPGYRDVTVVIPCRDNGFGLRRLLRALRGMRVIVVDDGSTIPIVESDLEGMHCHVEVVRHADSQGPAAARN
TGLKLATTDFVAFLDSDVVPRRGWLEALLGHFSDPAVALVAPRIVGLVLSDNAIARYEAVRSSLDLGLREAPVVPYGPVS
YVPSAAIVVRRSAINEIGGFDEALQCGEDVDLCWRLIEAGSRLRYEPVSHVAHDHRLTLREWFARKAFYGKSAAPLSTRH
PDKVAPMVISRWTLLVWILAAVGSGMGYLAAVGMAALAAGRVARTLRGVDTPPRDVVRVAAQGVGGAALQIASALCRHYW
PLALFAAALSRRSRQVLVVAAIVDGVVDWMKRNDSSASPDDRIGLIEYVLLKRLDDIAYGIGLWSGIVRERDLGALRPEL
RP
>Mature_481_residues
TTSDEQAQHAAPSQERLPDGFAVQVDRRVRVLDEGSALLGGSPTRLLRLAPAARTLLSGGRLEVRDATSAQLARTLLDAT
VAHPRPVGGPGYRDVTVVIPCRDNGFGLRRLLRALRGMRVIVVDDGSTIPIVESDLEGMHCHVEVVRHADSQGPAAARNT
GLKLATTDFVAFLDSDVVPRRGWLEALLGHFSDPAVALVAPRIVGLVLSDNAIARYEAVRSSLDLGLREAPVVPYGPVSY
VPSAAIVVRRSAINEIGGFDEALQCGEDVDLCWRLIEAGSRLRYEPVSHVAHDHRLTLREWFARKAFYGKSAAPLSTRHP
DKVAPMVISRWTLLVWILAAVGSGMGYLAAVGMAALAAGRVARTLRGVDTPPRDVVRVAAQGVGGAALQIASALCRHYWP
LALFAAALSRRSRQVLVVAAIVDGVVDWMKRNDSSASPDDRIGLIEYVLLKRLDDIAYGIGLWSGIVRERDLGALRPELR
P

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 52026; Mature: 51894

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSDEQAQHAAPSQERLPDGFAVQVDRRVRVLDEGSALLGGSPTRLLRLAPAARTLLSG
CCCCCCHHHHCCCCHHHCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
GRLEVRDATSAQLARTLLDATVAHPRPVGGPGYRDVTVVIPCRDNGFGLRRLLRALRGMR
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCE
VIVVDDGSTIPIVESDLEGMHCHVEVVRHADSQGPAAARNTGLKLATTDFVAFLDSDVVP
EEEEECCCCCCEECCCCCCCHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHHHHHCCCCCC
RRGWLEALLGHFSDPAVALVAPRIVGLVLSDNAIARYEAVRSSLDLGLREAPVVPYGPVS
CHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YVPSAAIVVRRSAINEIGGFDEALQCGEDVDLCWRLIEAGSRLRYEPVSHVAHDHRLTLR
HCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH
EWFARKAFYGKSAAPLSTRHPDKVAPMVISRWTLLVWILAAVGSGMGYLAAVGMAALAAG
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RVARTLRGVDTPPRDVVRVAAQGVGGAALQIASALCRHYWPLALFAAALSRRSRQVLVVA
HHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH
AIVDGVVDWMKRNDSSASPDDRIGLIEYVLLKRLDDIAYGIGLWSGIVRERDLGALRPEL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RP
CC
>Mature Secondary Structure 
TTSDEQAQHAAPSQERLPDGFAVQVDRRVRVLDEGSALLGGSPTRLLRLAPAARTLLSG
CCCCCHHHHCCCCHHHCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC
GRLEVRDATSAQLARTLLDATVAHPRPVGGPGYRDVTVVIPCRDNGFGLRRLLRALRGMR
CCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCE
VIVVDDGSTIPIVESDLEGMHCHVEVVRHADSQGPAAARNTGLKLATTDFVAFLDSDVVP
EEEEECCCCCCEECCCCCCCHHHHHHHHHCCCCCCCHHHCCCCEEEHHHHHHHHCCCCCC
RRGWLEALLGHFSDPAVALVAPRIVGLVLSDNAIARYEAVRSSLDLGLREAPVVPYGPVS
CHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YVPSAAIVVRRSAINEIGGFDEALQCGEDVDLCWRLIEAGSRLRYEPVSHVAHDHRLTLR
HCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHH
EWFARKAFYGKSAAPLSTRHPDKVAPMVISRWTLLVWILAAVGSGMGYLAAVGMAALAAG
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RVARTLRGVDTPPRDVVRVAAQGVGGAALQIASALCRHYWPLALFAAALSRRSRQVLVVA
HHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH
AIVDGVVDWMKRNDSSASPDDRIGLIEYVLLKRLDDIAYGIGLWSGIVRERDLGALRPEL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]