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The map label for this gene is ydiK [C]

Identifier: 169630868

GI number: 169630868

Start: 3843447

End: 3844586

Strand: Reverse

Name: ydiK [C]

Synonym: MAB_3788c

Alternate gene names: 169630868

Gene position: 3844586-3843447 (Counterclockwise)

Preceding gene: 169630869

Following gene: 169630866

Centisome position: 75.87

GC content: 61.67

Gene sequence:

>1140_bases
GTGAACACCGAACTGACCGTATTTCAGAAGCGGGTGCTGGCGGTTCTCACGGGTGTTGGTATCGCCTTCGGCATCTACTT
CCTGCGTGACTACCTGATATTGATTGTGGTAGCCGGGGTGGCCGCGTACCTGTTCAGCCCGCTGTATCGGCGACTGGGGA
AGCGATTCGGATCCGGTATTGCCGCCACGCTCACCTTGCTGTGTGCGTTGGGTGCGGTGGTGATTCCCGTCGGCGCGCTG
GTTTACGTTGCGACTCTTCAGATCACCCGGATGGTCGATGATGTCTCCAGCTGGGTGGAGGGCACCGATATGACCGCACT
CGGGCAGAAGGCGTTCGACGTGGTCAACAGTGTCCTGGCCAGGATCCCGTTCGTCCATGTCCAGCTGACGCCGGATACGT
TGCGGCAATCGATCGGGTCGTTGACGGAGAACGTGGGACACGGGCTACTGCAGGTGCTGCAGAGCACCGTCGGCAGTGTC
GCGGCTGCGGTGGCCGCCTGCATCATCTTCCTGTACGTGTTCGTCTCATTGCTGGTCAAACAGGACAAGGTGCTCACCCT
GCTGCGCCAGCTGAATCCGCTGGGGGAGGAGATCACCGATCTGTATCTCGACAAGATCGGCGCAATGGTGCGTGGAACGG
TCAAGGGCCAGTTCGTGATTGCGATGGCACAGGGCATTGCCGGTGCCGCGTCGGTCTACGTCGCCGGCTTCCGGCAGGGT
TTCTTCTTCTTCGCGATCCTGCTGACCGCATTGTCGATCATCCCGCTCGGCGGCGGCATAGTGACCATTCCGTTTGGTAT
CGGCATGATTCTCTTCGGCCACCCGGTCGGCGGGCTGTTCGTCATCGCCTGGCACCTGCTGGTGGTCTCCAATATCGATA
ACGTGTTGCGTCCCTTCCTGGTACCTCGCGGAGCACGTCTGGACCCGGCGCTGATGCTGTTGGCGGTATTTTCTGGGATT
GCCGCCTTCGGTTTCTGGGGAATCGTGCTGGGCCCGGTGTTGATGATCGTCATCGTGACCACGATCGACGTCTACCTGGC
CGTCTACAAGGGGGTTCCGCTGGAAGGTGGAGATGCCGACGAGCCCGAGACGCCCGGGCGCCCCTGGTGGAAGCGGTGGC
GCTCGGGCGCGACCGGCTAG

Upstream 100 bases:

>100_bases
ATGTTGGGCGACTACCGCTTTTAGTGCCCCAGCGCGTTTCGCCTGGGCGGGGGCCCGCACCCGCTAACGTGTCGTGTGCA
GGCGGCAGAAGGGGCGTGGC

Downstream 100 bases:

>100_bases
CCGAGAGTGGCGTCTACATACACGATATTAGGAAATATGCTGCGCAGCAAAGGGTTCGGTGGGTCCAGGTTGAGTCGCGC
GTAAAGCTCGTCGTTCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MNTELTVFQKRVLAVLTGVGIAFGIYFLRDYLILIVVAGVAAYLFSPLYRRLGKRFGSGIAATLTLLCALGAVVIPVGAL
VYVATLQITRMVDDVSSWVEGTDMTALGQKAFDVVNSVLARIPFVHVQLTPDTLRQSIGSLTENVGHGLLQVLQSTVGSV
AAAVAACIIFLYVFVSLLVKQDKVLTLLRQLNPLGEEITDLYLDKIGAMVRGTVKGQFVIAMAQGIAGAASVYVAGFRQG
FFFFAILLTALSIIPLGGGIVTIPFGIGMILFGHPVGGLFVIAWHLLVVSNIDNVLRPFLVPRGARLDPALMLLAVFSGI
AAFGFWGIVLGPVLMIVIVTTIDVYLAVYKGVPLEGGDADEPETPGRPWWKRWRSGATG

Sequences:

>Translated_379_residues
MNTELTVFQKRVLAVLTGVGIAFGIYFLRDYLILIVVAGVAAYLFSPLYRRLGKRFGSGIAATLTLLCALGAVVIPVGAL
VYVATLQITRMVDDVSSWVEGTDMTALGQKAFDVVNSVLARIPFVHVQLTPDTLRQSIGSLTENVGHGLLQVLQSTVGSV
AAAVAACIIFLYVFVSLLVKQDKVLTLLRQLNPLGEEITDLYLDKIGAMVRGTVKGQFVIAMAQGIAGAASVYVAGFRQG
FFFFAILLTALSIIPLGGGIVTIPFGIGMILFGHPVGGLFVIAWHLLVVSNIDNVLRPFLVPRGARLDPALMLLAVFSGI
AAFGFWGIVLGPVLMIVIVTTIDVYLAVYKGVPLEGGDADEPETPGRPWWKRWRSGATG
>Mature_379_residues
MNTELTVFQKRVLAVLTGVGIAFGIYFLRDYLILIVVAGVAAYLFSPLYRRLGKRFGSGIAATLTLLCALGAVVIPVGAL
VYVATLQITRMVDDVSSWVEGTDMTALGQKAFDVVNSVLARIPFVHVQLTPDTLRQSIGSLTENVGHGLLQVLQSTVGSV
AAAVAACIIFLYVFVSLLVKQDKVLTLLRQLNPLGEEITDLYLDKIGAMVRGTVKGQFVIAMAQGIAGAASVYVAGFRQG
FFFFAILLTALSIIPLGGGIVTIPFGIGMILFGHPVGGLFVIAWHLLVVSNIDNVLRPFLVPRGARLDPALMLLAVFSGI
AAFGFWGIVLGPVLMIVIVTTIDVYLAVYKGVPLEGGDADEPETPGRPWWKRWRSGATG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40506; Mature: 40506

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure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CCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]