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The map label for this gene is secY [H]

Identifier: 169630864

GI number: 169630864

Start: 3838765

End: 3840024

Strand: Reverse

Name: secY [H]

Synonym: MAB_3784c

Alternate gene names: 169630864

Gene position: 3840024-3838765 (Counterclockwise)

Preceding gene: 169630865

Following gene: 169630863

Centisome position: 75.78

GC content: 62.22

Gene sequence:

>1260_bases
GTGGTCCTGTATCGGGTCGGCGCCACCCTGCCGTCTCCCGGCGTGAACTACGCCAACGTGAAGTACTGCGTCGAGCAGGT
CAGCAGCGGCGACTCCGCACAGATCTACTCCCTGATCAACCTGTTCTCCGGTGGCGCGTTGCTGCAGCTGTCGGTGTTCG
CGGTCGGCGTGATGCCGTACATCACCGCCAGCATCATCGTTCAGCTGCTCACCGTCGTCATTCCCCGGTTCGAGCAGTTG
CGCAAGGAAGGTCAATCCGGCCAGGCCAAGATGACGCAGTACACCCGCTACCTCTCGGTGGCGCTGGCACTGCTGCAGTC
CACCTCGATCGTCGCTCTCGGCGCCAGTGGAAACCTCTTGCAGGGCTGTGACCGCAAGGACGAGATTGTGGCCGACCAGT
CGATCTTCGCGCTGTCGGTGATGGTGCTGGTGATGACCGCTGGATCCACCCTGGTGATGTGGCTCGGTGAAATGGTCACC
GAGCGCGGCATCGGAAACGGCATGTCGCTGCTGATCTTCGCCGGTATCGCCGCGCGCATCCCGGCCGAGGGCAAGACCAT
CCTGGACAGCCGCGGTGGGGTCACCTTCGCGGCCGTCTGTGTGGCGGCGCTGCTGATCGTGGTCGGTGTCGTGTTCGTCG
AGCAGGGCCAGCGACGTATCCCCGTCCAGTACGCCAAGCGCATGGTGGGTCGGCGGATGTACGGCGGCACCTCCACCTAC
TTGCCGCTGAAGGTCAACCAGGCCGGCGTTATCCCGGTCATCTTCGCGTCGTCCCTGCTGTACATCCCCGGCTTGATCAC
CCAGCTGGTGCGCAGCGGTGGCAATAAGGAGAAGACGGGCTGGTGGGACCGGTTCGTCAGCACCTATCTGACCGATCCCA
GCAACTACTGGTACATCGCCATTTACTTCACGCTCATCGTGTTCTTCACGTTCTTCTACGTGTCGATCACCTTCAACCCC
GATGAGCGCGCCGACGAGATGAACAAGTTCGGCGGCTTTATCCCGGGCATTCGTCCGGGGCGCGCCACCGCCGACTACCT
GCGCTATGTGCTCAACCGCATTACGTGGCCGGGCTCGATCTACCTGGGCGTCATCGCCATCCTGCCGAACCTGTTCCTGC
AGATCGGTAGCTCCGGAGGCGCACAGAACCTGCCGTTCGGCGGAACTGCGGTACTCATCATGATCGGCGTGGGCCTCGAT
ACCGTGAAGCAGATTGAAAGCCAGTTGATGCAGCGTAACTACGAAGGGTTCCTGAAGTGA

Upstream 100 bases:

>100_bases
GCGAGCTGCAGGATGCGCAGGAGGATGTGTGCTTTCCGCTTTTGTCTCTGCTCTCAGGACAGCTGACCTGAGGCGGAAGA
TCCTCTTCACGATCGGGATC

Downstream 100 bases:

>100_bases
GAGTGGTGTTACTCGGCCCGCCCGGGGCAGGCAAAGGTACGCAGGCGCAGCTGATTTCGGAGAAGTTCGGTATTCCGCAG
ATCTCCACCGGCGACCTGTT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MVLYRVGATLPSPGVNYANVKYCVEQVSSGDSAQIYSLINLFSGGALLQLSVFAVGVMPYITASIIVQLLTVVIPRFEQL
RKEGQSGQAKMTQYTRYLSVALALLQSTSIVALGASGNLLQGCDRKDEIVADQSIFALSVMVLVMTAGSTLVMWLGEMVT
ERGIGNGMSLLIFAGIAARIPAEGKTILDSRGGVTFAAVCVAALLIVVGVVFVEQGQRRIPVQYAKRMVGRRMYGGTSTY
LPLKVNQAGVIPVIFASSLLYIPGLITQLVRSGGNKEKTGWWDRFVSTYLTDPSNYWYIAIYFTLIVFFTFFYVSITFNP
DERADEMNKFGGFIPGIRPGRATADYLRYVLNRITWPGSIYLGVIAILPNLFLQIGSSGGAQNLPFGGTAVLIMIGVGLD
TVKQIESQLMQRNYEGFLK

Sequences:

>Translated_419_residues
MVLYRVGATLPSPGVNYANVKYCVEQVSSGDSAQIYSLINLFSGGALLQLSVFAVGVMPYITASIIVQLLTVVIPRFEQL
RKEGQSGQAKMTQYTRYLSVALALLQSTSIVALGASGNLLQGCDRKDEIVADQSIFALSVMVLVMTAGSTLVMWLGEMVT
ERGIGNGMSLLIFAGIAARIPAEGKTILDSRGGVTFAAVCVAALLIVVGVVFVEQGQRRIPVQYAKRMVGRRMYGGTSTY
LPLKVNQAGVIPVIFASSLLYIPGLITQLVRSGGNKEKTGWWDRFVSTYLTDPSNYWYIAIYFTLIVFFTFFYVSITFNP
DERADEMNKFGGFIPGIRPGRATADYLRYVLNRITWPGSIYLGVIAILPNLFLQIGSSGGAQNLPFGGTAVLIMIGVGLD
TVKQIESQLMQRNYEGFLK
>Mature_419_residues
MVLYRVGATLPSPGVNYANVKYCVEQVSSGDSAQIYSLINLFSGGALLQLSVFAVGVMPYITASIIVQLLTVVIPRFEQL
RKEGQSGQAKMTQYTRYLSVALALLQSTSIVALGASGNLLQGCDRKDEIVADQSIFALSVMVLVMTAGSTLVMWLGEMVT
ERGIGNGMSLLIFAGIAARIPAEGKTILDSRGGVTFAAVCVAALLIVVGVVFVEQGQRRIPVQYAKRMVGRRMYGGTSTY
LPLKVNQAGVIPVIFASSLLYIPGLITQLVRSGGNKEKTGWWDRFVSTYLTDPSNYWYIAIYFTLIVFFTFFYVSITFNP
DERADEMNKFGGFIPGIRPGRATADYLRYVLNRITWPGSIYLGVIAILPNLFLQIGSSGGAQNLPFGGTAVLIMIGVGLD
TVKQIESQLMQRNYEGFLK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=427, Percent_Identity=42.6229508196721, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 45616; Mature: 45616

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLYRVGATLPSPGVNYANVKYCVEQVSSGDSAQIYSLINLFSGGALLQLSVFAVGVMPY
CEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLSVALALLQSTSIVALGASGNLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH
QGCDRKDEIVADQSIFALSVMVLVMTAGSTLVMWLGEMVTERGIGNGMSLLIFAGIAARI
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
PAEGKTILDSRGGVTFAAVCVAALLIVVGVVFVEQGQRRIPVQYAKRMVGRRMYGGTSTY
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEE
LPLKVNQAGVIPVIFASSLLYIPGLITQLVRSGGNKEKTGWWDRFVSTYLTDPSNYWYIA
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHH
IYFTLIVFFTFFYVSITFNPDERADEMNKFGGFIPGIRPGRATADYLRYVLNRITWPGSI
HHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
YLGVIAILPNLFLQIGSSGGAQNLPFGGTAVLIMIGVGLDTVKQIESQLMQRNYEGFLK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MVLYRVGATLPSPGVNYANVKYCVEQVSSGDSAQIYSLINLFSGGALLQLSVFAVGVMPY
CEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ITASIIVQLLTVVIPRFEQLRKEGQSGQAKMTQYTRYLSVALALLQSTSIVALGASGNLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH
QGCDRKDEIVADQSIFALSVMVLVMTAGSTLVMWLGEMVTERGIGNGMSLLIFAGIAARI
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
PAEGKTILDSRGGVTFAAVCVAALLIVVGVVFVEQGQRRIPVQYAKRMVGRRMYGGTSTY
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEE
LPLKVNQAGVIPVIFASSLLYIPGLITQLVRSGGNKEKTGWWDRFVSTYLTDPSNYWYIA
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHH
IYFTLIVFFTFFYVSITFNPDERADEMNKFGGFIPGIRPGRATADYLRYVLNRITWPGSI
HHHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
YLGVIAILPNLFLQIGSSGGAQNLPFGGTAVLIMIGVGLDTVKQIESQLMQRNYEGFLK
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9350347; 12788972 [H]