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The map label for this gene is phoD [H]

Identifier: 169630828

GI number: 169630828

Start: 3803141

End: 3804655

Strand: Direct

Name: phoD [H]

Synonym: MAB_3749

Alternate gene names: 169630828

Gene position: 3803141-3804655 (Clockwise)

Preceding gene: 169630827

Following gene: 169630836

Centisome position: 75.05

GC content: 65.08

Gene sequence:

>1515_bases
ATGACAGCTTTTCCGCGCCGCACAGTGCTGCGGGCCGCTCTGCTCGGGCTCGCGGCGGTGCCGGTGGCCGCATGTGGGCC
GGCGCTCGTGACAACGCGCCCGCGGTTGACCCACGGAGTCGCGAGCGGATTCCCGCGTACCGACGGCGCGGTGATCTGGG
CCCGCTCGGATCGACCCGCCGCCCTGATCGTCGAAACCGCTGCCACCGAAAGTTTTTCGGACACAAGACGCTTCACCGGC
CCGTTGCTTACTCCGGACGCGGACGGTACCGGCCGAATCCGCCTCACCGGCCTACCCGCGGATTCGGAGGTGCACTACCG
GGTGACGCTCGACGCGGACGGGGCGCTCAGCGAGCCTGCCACCGGCGTCTTCCGAACCGCGCCGGCGACGGCCCGCGACG
TCCGACTGATCTGGTCCGGCGACGTGGCGGGGCAGGGGTTCGGCATCAATCCCGACATCGGCGGAATGACGGTCTTCCGC
ACCATGGCCGAGCGAAATCCCCACTTCTTCATCCACAGTGGCGACACGGTGTACGCGGATGTCCCAATTCCCGAGACCCT
GCCCCTGCCCGACGGACGGATCTGGCGCAACGAGATATCCGAGGCGAAAAGCGCTGTCGCGCAGACCCTTGACCAGTATC
GCGGACAACACGCCTATAACCTCACCGATGCCAACTACCGGTACTTCAATGCCCACGTGCCTCAGCTTGTGCAGTGGGAT
GACCACGAGGTGATCAACAACTGGTACCCCGGCGAGGTGCTCGACAACGACAAGTACACCGAAAAGCGGGTCGACATACT
CGCGCGGCACGGACATCGGGCATTCCATGAATGGCAACCGCTGGAAGCCCGCGAGGCCGTGGACGGACGTGTGTACCAAA
GAGTCTCGTACGGCCCACTACTGGACGTGTTCCTGCTCGACATGCGGAGCTACAAGGATCCCAACTCCCCCAACCGTCAG
CAACACGGCACCATCCTGGGTGCCCGCCAGGCCGGATGGCTCATCAACGAGATGGCCTCATCCACGGCCGTGTGGAAGGT
CGTGGCCAATGACCTGCCCCTGGCACTGGTGGTCCCGGACGGAACAACGGACTTCGAGGCCGTCGCCAACGGCGACAACG
ACTTACCTCTCGGACGGGAAACCGAACTGGCACATATTCTCTCGCAGCTCAAGGCACGAAAGGTGCGCAACGTGGTATGG
CTGACGGCCGACGTGCACTACACCGCGGCACACGAATACTCACCCGCCCGCGCCGCCTTCACCGACTTCGACCCGTTCTG
GGAGTTCGTGTCGGGTCCGCTGAACGCGGGCGCCGGTAAAGAGTCGACTCTTGACGGAACCTTCGGTCCTCGTGCCGATT
TCGTCCATGCGGCACCGCCCGGCAAGCAGTCACCACTGGACGGCTATCAACACTTCGGGCAGATCGACATCGACGGCGGC
AGCGGCGACCTGACGGTCACACTGTGTGACGCGGCGGGCGCGGCCCTGTACACCCGCACCCTGGCGCGCATTTAG

Upstream 100 bases:

>100_bases
CCGCATCAAGCATGTCGAGGCATTACGCGAACTGCTCTGATTCGCGCGCCGTTCGCTCTGCGTTCGACGTGTGTTCGCCT
GCTGCCCTAAAGGTGGTGGG

Downstream 100 bases:

>100_bases
ACCGCACCCACCACTTGGGCCACCCGCTCGGCGAGGCGCTGGGCGGTTGATTGCTCATCAGCTTCGACCATGACACGAAC
AAGCTGTTCGGTTCCGGAGG

Product: putative phosphodiesterase/alkaline phosphatase

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTAFPRRTVLRAALLGLAAVPVAACGPALVTTRPRLTHGVASGFPRTDGAVIWARSDRPAALIVETAATESFSDTRRFTG
PLLTPDADGTGRIRLTGLPADSEVHYRVTLDADGALSEPATGVFRTAPATARDVRLIWSGDVAGQGFGINPDIGGMTVFR
TMAERNPHFFIHSGDTVYADVPIPETLPLPDGRIWRNEISEAKSAVAQTLDQYRGQHAYNLTDANYRYFNAHVPQLVQWD
DHEVINNWYPGEVLDNDKYTEKRVDILARHGHRAFHEWQPLEAREAVDGRVYQRVSYGPLLDVFLLDMRSYKDPNSPNRQ
QHGTILGARQAGWLINEMASSTAVWKVVANDLPLALVVPDGTTDFEAVANGDNDLPLGRETELAHILSQLKARKVRNVVW
LTADVHYTAAHEYSPARAAFTDFDPFWEFVSGPLNAGAGKESTLDGTFGPRADFVHAAPPGKQSPLDGYQHFGQIDIDGG
SGDLTVTLCDAAGAALYTRTLARI

Sequences:

>Translated_504_residues
MTAFPRRTVLRAALLGLAAVPVAACGPALVTTRPRLTHGVASGFPRTDGAVIWARSDRPAALIVETAATESFSDTRRFTG
PLLTPDADGTGRIRLTGLPADSEVHYRVTLDADGALSEPATGVFRTAPATARDVRLIWSGDVAGQGFGINPDIGGMTVFR
TMAERNPHFFIHSGDTVYADVPIPETLPLPDGRIWRNEISEAKSAVAQTLDQYRGQHAYNLTDANYRYFNAHVPQLVQWD
DHEVINNWYPGEVLDNDKYTEKRVDILARHGHRAFHEWQPLEAREAVDGRVYQRVSYGPLLDVFLLDMRSYKDPNSPNRQ
QHGTILGARQAGWLINEMASSTAVWKVVANDLPLALVVPDGTTDFEAVANGDNDLPLGRETELAHILSQLKARKVRNVVW
LTADVHYTAAHEYSPARAAFTDFDPFWEFVSGPLNAGAGKESTLDGTFGPRADFVHAAPPGKQSPLDGYQHFGQIDIDGG
SGDLTVTLCDAAGAALYTRTLARI
>Mature_503_residues
TAFPRRTVLRAALLGLAAVPVAACGPALVTTRPRLTHGVASGFPRTDGAVIWARSDRPAALIVETAATESFSDTRRFTGP
LLTPDADGTGRIRLTGLPADSEVHYRVTLDADGALSEPATGVFRTAPATARDVRLIWSGDVAGQGFGINPDIGGMTVFRT
MAERNPHFFIHSGDTVYADVPIPETLPLPDGRIWRNEISEAKSAVAQTLDQYRGQHAYNLTDANYRYFNAHVPQLVQWDD
HEVINNWYPGEVLDNDKYTEKRVDILARHGHRAFHEWQPLEAREAVDGRVYQRVSYGPLLDVFLLDMRSYKDPNSPNRQQ
HGTILGARQAGWLINEMASSTAVWKVVANDLPLALVVPDGTTDFEAVANGDNDLPLGRETELAHILSQLKARKVRNVVWL
TADVHYTAAHEYSPARAAFTDFDPFWEFVSGPLNAGAGKESTLDGTFGPRADFVHAAPPGKQSPLDGYQHFGQIDIDGGS
GDLTVTLCDAAGAALYTRTLARI

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 55055; Mature: 54924

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFPRRTVLRAALLGLAAVPVAACGPALVTTRPRLTHGVASGFPRTDGAVIWARSDRPA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCCCCCCEEEEEECCCCE
ALIVETAATESFSDTRRFTGPLLTPDADGTGRIRLTGLPADSEVHYRVTLDADGALSEPA
EEEEEECCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
TGVFRTAPATARDVRLIWSGDVAGQGFGINPDIGGMTVFRTMAERNPHFFIHSGDTVYAD
CCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEE
VPIPETLPLPDGRIWRNEISEAKSAVAQTLDQYRGQHAYNLTDANYRYFNAHVPQLVQWD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCHHCCCC
DHEVINNWYPGEVLDNDKYTEKRVDILARHGHRAFHEWQPLEAREAVDGRVYQRVSYGPL
CHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCHHHHHCCCCCH
LDVFLLDMRSYKDPNSPNRQQHGTILGARQAGWLINEMASSTAVWKVVANDLPLALVVPD
HHHHHHHHHHCCCCCCCCCHHCCCEEECHHHCHHHHHHHCCCEEEEEEECCCCEEEEECC
GTTDFEAVANGDNDLPLGRETELAHILSQLKARKVRNVVWLTADVHYTAAHEYSPARAAF
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCCCCCCHHCC
TDFDPFWEFVSGPLNAGAGKESTLDGTFGPRADFVHAAPPGKQSPLDGYQHFGQIDIDGG
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCEEEECCC
SGDLTVTLCDAAGAALYTRTLARI
CCCEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
TAFPRRTVLRAALLGLAAVPVAACGPALVTTRPRLTHGVASGFPRTDGAVIWARSDRPA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHCCCCCCCCEEEEEECCCCE
ALIVETAATESFSDTRRFTGPLLTPDADGTGRIRLTGLPADSEVHYRVTLDADGALSEPA
EEEEEECCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
TGVFRTAPATARDVRLIWSGDVAGQGFGINPDIGGMTVFRTMAERNPHFFIHSGDTVYAD
CCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEE
VPIPETLPLPDGRIWRNEISEAKSAVAQTLDQYRGQHAYNLTDANYRYFNAHVPQLVQWD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCHHCCCC
DHEVINNWYPGEVLDNDKYTEKRVDILARHGHRAFHEWQPLEAREAVDGRVYQRVSYGPL
CHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCHHHHHCCCCCH
LDVFLLDMRSYKDPNSPNRQQHGTILGARQAGWLINEMASSTAVWKVVANDLPLALVVPD
HHHHHHHHHHCCCCCCCCCHHCCCEEECHHHCHHHHHHHCCCEEEEEEECCCCEEEEECC
GTTDFEAVANGDNDLPLGRETELAHILSQLKARKVRNVVWLTADVHYTAAHEYSPARAAF
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCCCCCCHHCC
TDFDPFWEFVSGPLNAGAGKESTLDGTFGPRADFVHAAPPGKQSPLDGYQHFGQIDIDGG
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCEEEECCC
SGDLTVTLCDAAGAALYTRTLARI
CCCEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]