| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630802
Identifier: 169630802
GI number: 169630802
Start: 3779395
End: 3780759
Strand: Reverse
Name: 169630802
Synonym: MAB_3723c
Alternate gene names: NA
Gene position: 3780759-3779395 (Counterclockwise)
Preceding gene: 169630803
Following gene: 169630800
Centisome position: 74.61
GC content: 68.94
Gene sequence:
>1365_bases GTGGCTGATGGACGCGGATGGTTCCCCGGCCAGGGTGGCTGGCAAGAGAACGAGGGACCGGAGGATCTGGCCGCACTGCG GCGCACCAACCGGATGATCGACGCCATCGCGGCGGATCTGCCGGTGGCCACCTCCGATTCGGACGAGTACGCCGTGGCGA TGATGCTGGCGGCGTGGCGCGAGGACGTGGGGCGCGAGCCGATGCCTGCCAAACCCACACTCGGGCAAGCGCGTAACGCA TTGCGCGATCGCGGCGGCCGGTCACGGATGCTGGCCACAACAGTCGGCTCGGCGGCCGCGGTAACCCTGTTGTTCGGCGG GTTCGGTGCCGCCGTCTACCAGTCGCATCCCGGTGATGCCCTCTACGGGCTGCGCACGTCGCTGTTCGGGGCGCCCCCGG CGGTGCGTACCGATCCGGTGGTGCTGTCGGCGCAGACCGAGCTCGCGCAGGTGGAAAAGCTTATTTCCCAAGGGGATTGG GAAGAGGCGCAGCAGCAACTGGGGGTGGCTGCCGCGCGCGTCAACGAGGTCGGCGACGCCCAGCAGAAGGCCGAGCTGGC CAGCCGTGTGCAGCAGGCGGAAGTCAGGATCGACGCCAAGGATCCGCAGGCGACGGTACCGCCGGAGATGGTGACCGAGA CACCGCGAATCATGTTGTCGCCGCCATCGATTGCGCCCATCACCAGCACAACCACCACCTCGACCACGTCAACGACGTCG GCATCGACCACCACATCCGACAGCACGTCCGCGTCCACATCCACGACCGAAACAAGCGGGTCGGCGTCGCCGAGCACGTC CAGCTCCACGTCGACGAGCGCGACGGCGTCGACGAGCGTGACGTCCGTGCCGACGTCCACACCGACCACCGTCACGATCA CTACGACGCCGCCCAGCTCGGCCGCCACGATCACCTCGACCCCGGCTAGCGCGACGGAGACGACGACCGCTCCGTCCGTG TCCACCGCACCGACCACGTCCGTACCGGGAGTGACGGCAAGCACCACAGTGCCGCCGACGGCGTCCATCGTGACGGTCCC CACGACTCCGGAAGGGGTGACCATCGTCACCACTCGGCCCGGCGTGGTCAACACTCCCGTGATCACCGCGCCGACGACGA TCGAAGCGCCGGTGCCGATTACCCGCACCCCCGACAATCCGGCGCCGGCGTATCAGGCCCCCGTCAACAGCCCGGGGTCG GGGAACCTGCACGGGTATCCGGGCAGTGGCGGAAACGCGGGGTCGGGGTCGGACGGACCGTCACGGCACATGCCGGCAAT GACGTCGGTTCCGGTCGCACCGGCCAACCCGGGGAGTGGGTCGGCGAATCAGGGCAGCGGATCGGGTTCGCACACCGACG AGTAG
Upstream 100 bases:
>100_bases ACCGCCGATGCGGTCGGTAGTAGCGCGGGCGCGGTACGGGTGGCGCAGCACCGGGCACTTCAGAAACTCAAGGCCGAGAT GACTCGGGCGGGTGATTACC
Downstream 100 bases:
>100_bases GCGTAGAGGCCTAGATCAAACGAGGAATCAGCGGAATCCGTCGCGGTCGGTTGCCGCCTCGTTGAGGGAGGCATCGGCAT AGCCACGGCAATAATCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MADGRGWFPGQGGWQENEGPEDLAALRRTNRMIDAIAADLPVATSDSDEYAVAMMLAAWREDVGREPMPAKPTLGQARNA LRDRGGRSRMLATTVGSAAAVTLLFGGFGAAVYQSHPGDALYGLRTSLFGAPPAVRTDPVVLSAQTELAQVEKLISQGDW EEAQQQLGVAAARVNEVGDAQQKAELASRVQQAEVRIDAKDPQATVPPEMVTETPRIMLSPPSIAPITSTTTTSTTSTTS ASTTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSVTSVPTSTPTTVTITTTPPSSAATITSTPASATETTTAPSV STAPTTSVPGVTASTTVPPTASIVTVPTTPEGVTIVTTRPGVVNTPVITAPTTIEAPVPITRTPDNPAPAYQAPVNSPGS GNLHGYPGSGGNAGSGSDGPSRHMPAMTSVPVAPANPGSGSANQGSGSGSHTDE
Sequences:
>Translated_454_residues MADGRGWFPGQGGWQENEGPEDLAALRRTNRMIDAIAADLPVATSDSDEYAVAMMLAAWREDVGREPMPAKPTLGQARNA LRDRGGRSRMLATTVGSAAAVTLLFGGFGAAVYQSHPGDALYGLRTSLFGAPPAVRTDPVVLSAQTELAQVEKLISQGDW EEAQQQLGVAAARVNEVGDAQQKAELASRVQQAEVRIDAKDPQATVPPEMVTETPRIMLSPPSIAPITSTTTTSTTSTTS ASTTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSVTSVPTSTPTTVTITTTPPSSAATITSTPASATETTTAPSV STAPTTSVPGVTASTTVPPTASIVTVPTTPEGVTIVTTRPGVVNTPVITAPTTIEAPVPITRTPDNPAPAYQAPVNSPGS GNLHGYPGSGGNAGSGSDGPSRHMPAMTSVPVAPANPGSGSANQGSGSGSHTDE >Mature_453_residues ADGRGWFPGQGGWQENEGPEDLAALRRTNRMIDAIAADLPVATSDSDEYAVAMMLAAWREDVGREPMPAKPTLGQARNAL RDRGGRSRMLATTVGSAAAVTLLFGGFGAAVYQSHPGDALYGLRTSLFGAPPAVRTDPVVLSAQTELAQVEKLISQGDWE EAQQQLGVAAARVNEVGDAQQKAELASRVQQAEVRIDAKDPQATVPPEMVTETPRIMLSPPSIAPITSTTTTSTTSTTSA STTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSVTSVPTSTPTTVTITTTPPSSAATITSTPASATETTTAPSVS TAPTTSVPGVTASTTVPPTASIVTVPTTPEGVTIVTTRPGVVNTPVITAPTTIEAPVPITRTPDNPAPAYQAPVNSPGSG NLHGYPGSGGNAGSGSDGPSRHMPAMTSVPVAPANPGSGSANQGSGSGSHTDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45752; Mature: 45621
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGRGWFPGQGGWQENEGPEDLAALRRTNRMIDAIAADLPVATSDSDEYAVAMMLAAWR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH EDVGREPMPAKPTLGQARNALRDRGGRSRMLATTVGSAAAVTLLFGGFGAAVYQSHPGDA HHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHCCHHEEHHHHHCCCHHHHCCCCCCH LYGLRTSLFGAPPAVRTDPVVLSAQTELAQVEKLISQGDWEEAQQQLGVAAARVNEVGDA HHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH QQKAELASRVQQAEVRIDAKDPQATVPPEMVTETPRIMLSPPSIAPITSTTTTSTTSTTS HHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC ASTTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSVTSVPTSTPTTVTITTTPPSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCC AATITSTPASATETTTAPSVSTAPTTSVPGVTASTTVPPTASIVTVPTTPEGVTIVTTRP CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECC GVVNTPVITAPTTIEAPVPITRTPDNPAPAYQAPVNSPGSGNLHGYPGSGGNAGSGSDGP CCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRHMPAMTSVPVAPANPGSGSANQGSGSGSHTDE CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADGRGWFPGQGGWQENEGPEDLAALRRTNRMIDAIAADLPVATSDSDEYAVAMMLAAWR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH EDVGREPMPAKPTLGQARNALRDRGGRSRMLATTVGSAAAVTLLFGGFGAAVYQSHPGDA HHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHCCHHEEHHHHHCCCHHHHCCCCCCH LYGLRTSLFGAPPAVRTDPVVLSAQTELAQVEKLISQGDWEEAQQQLGVAAARVNEVGDA HHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCH QQKAELASRVQQAEVRIDAKDPQATVPPEMVTETPRIMLSPPSIAPITSTTTTSTTSTTS HHHHHHHHHHHHHHEEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC ASTTTSDSTSASTSTTETSGSASPSTSSSTSTSATASTSVTSVPTSTPTTVTITTTPPSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCC AATITSTPASATETTTAPSVSTAPTTSVPGVTASTTVPPTASIVTVPTTPEGVTIVTTRP CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECC GVVNTPVITAPTTIEAPVPITRTPDNPAPAYQAPVNSPGSGNLHGYPGSGGNAGSGSDGP CCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SRHMPAMTSVPVAPANPGSGSANQGSGSGSHTDE CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]