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The map label for this gene is mmgC [H]

Identifier: 169630657

GI number: 169630657

Start: 3622065

End: 3623720

Strand: Reverse

Name: mmgC [H]

Synonym: MAB_3577c

Alternate gene names: 169630657

Gene position: 3623720-3622065 (Counterclockwise)

Preceding gene: 169630658

Following gene: 169630656

Centisome position: 71.51

GC content: 66.85

Gene sequence:

>1656_bases
ATGACCACGGCGATATCCACTACGGCAACCGATCTGGACGTGGCCCTGGGTGATCCCTTCTGCCCGGCCAACCCGCACGG
TGCCACTGCGATTCTGGCGGCGGATGAGCGTGCCGAGCGTGCCTTAGCGACCTATCAGCTGCTCGCGGATCTGGGATTAC
AGCGCATGTTCGTTCCCATCGAGCTGGGCGGTGACCTTGTCGACATCCCGTCGCTGGTGCGCGTGCTGGCCCCGGTGTTC
GGGCGCGACATGGGGCTGGGCCTCGGATTCGGTGTCACCACCCTGATGGCTGCGCTCAACGTGTGGCACAGCGGAGACGA
CCGGCAGCGGCGCCGGGTCGCGGATCAGGTATTGACCGGTGCACCTCTCTCCGTGGCTTATCACGAACTCGACCATGGAA
ACGACATGGCAGCCAACGAAGTTCGTGCGGTCGCGACGGCCGGTGGCTATCGGTTATCCGGGCGCAAGGAGGTCATCAAC
AACGCGAGTCGTGCTAGTGCGGCCGTGGTATTCGCCCGTACCTCGGACCGCCCGGGCAGGAGTCATTCGCTGTTCCTGGC
GGACCTCGATAACGTCAGGCGGCTCGATCGGTTTCGCACCACGGCCCTGCGAACGGCGCAATTGGGCGGCCTGGACTTCC
ACGACCATCAGGTGGGTGTCGAAGACCGCATCGGCGCCGAGGGGCACGGCATCGAGATCGCGCTGAAATCGTTCCAGATC
AGCCGGGTGGTAATGGCAGGCGCGGGTCTGGGCCCGGTAGACGTGGCGCTGCATCTGGCAGCCTCGTTCGCGCGGCAACG
TGTCGTGTACGGCCGTCGTGTCGACCAGATTCCGCATGCTCGAACCAATCTCGCGATCGCACAGTCACTACTGCTGGCGG
TCGAGGCTGCCGTAACGACGGCGGCGGTGGGTCTGCACACCTCGCCGCAACACGCCGGCGCGCAGGCGGCTTCCGTCAAA
TACGCCGCGCCACTGCTGCTTGAGTACGCGATGGAACACCTCGCGGTGGTACTGGGCGCCCGGTTCTATCTGCGGACGGG
GCCGTTTGCACTTTTCGGAAAGCACTACCGAGACTTGGCGCCGGTGGGCATCGGTCACGCCGGCAGCACCTCCTGCTTGC
TCGCGCTGCTCCCGCAGGTCCGCCATCTGCTGCAGCCGGGCACCGCCGCCGCTCTTCCAGCCCCCGGCGCACAGCTGCCC
CGGTTGGACTTCTCCGAGCTCGTTTTGCGCAGTGGCGCACCGGATCCCATCGTGTCATGGACTCCTGCGGCCACACCACT
AACCGCCCCCGGTGCGGGTGACCTGATCGAGGAACAGGCACGGACCCTGGAACGGCTGCGCGGTGCGGCAGAGAGGATAC
CCGCGTCCGCGCTCGGTGTGACCGCGCCGCCGGCGGCATTCGACCTGGCCGAGCAGTTCACGAAGCGGTTTGTCGTGGCC
GCGGCACTGGCGGTACGGGAATCCGACCGGACAGAGTTCGCCGACGCCTGGGTGCGGATCGCCATCGCGGCCGTCGCGGC
GCACCGGCGTGGTCGCGCGGTGGTCGATCCCGCAGACGTCGACGTGGTGGTGCAGCGGATCGACAGACACGTTGCCGGCT
CGCGCTCGTTGTTGCTCGACGGGCATGAGTTGCCCCGCTCGATTCCTGCCCTTTGA

Upstream 100 bases:

>100_bases
ACCACGATGCCGCCATTGCGGCACTCGAATCGCTGAATCGCTCGGATGCGGGTTTCAGCGTGCTGGCGAACGTGCTCGAT
GACGAGACGGGAGATCGAGT

Downstream 100 bases:

>100_bases
GCTGAATTCGCCTGAACCGAAACCACACCCAAACCGAACCGAAAGAGGAAACGATGACCGCACCCGCTCTCGACGACTGG
CTGGCCGGAAAGATCGCAGG

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MTTAISTTATDLDVALGDPFCPANPHGATAILAADERAERALATYQLLADLGLQRMFVPIELGGDLVDIPSLVRVLAPVF
GRDMGLGLGFGVTTLMAALNVWHSGDDRQRRRVADQVLTGAPLSVAYHELDHGNDMAANEVRAVATAGGYRLSGRKEVIN
NASRASAAVVFARTSDRPGRSHSLFLADLDNVRRLDRFRTTALRTAQLGGLDFHDHQVGVEDRIGAEGHGIEIALKSFQI
SRVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHARTNLAIAQSLLLAVEAAVTTAAVGLHTSPQHAGAQAASVK
YAAPLLLEYAMEHLAVVLGARFYLRTGPFALFGKHYRDLAPVGIGHAGSTSCLLALLPQVRHLLQPGTAAALPAPGAQLP
RLDFSELVLRSGAPDPIVSWTPAATPLTAPGAGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVA
AALAVRESDRTEFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHVAGSRSLLLDGHELPRSIPAL

Sequences:

>Translated_551_residues
MTTAISTTATDLDVALGDPFCPANPHGATAILAADERAERALATYQLLADLGLQRMFVPIELGGDLVDIPSLVRVLAPVF
GRDMGLGLGFGVTTLMAALNVWHSGDDRQRRRVADQVLTGAPLSVAYHELDHGNDMAANEVRAVATAGGYRLSGRKEVIN
NASRASAAVVFARTSDRPGRSHSLFLADLDNVRRLDRFRTTALRTAQLGGLDFHDHQVGVEDRIGAEGHGIEIALKSFQI
SRVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHARTNLAIAQSLLLAVEAAVTTAAVGLHTSPQHAGAQAASVK
YAAPLLLEYAMEHLAVVLGARFYLRTGPFALFGKHYRDLAPVGIGHAGSTSCLLALLPQVRHLLQPGTAAALPAPGAQLP
RLDFSELVLRSGAPDPIVSWTPAATPLTAPGAGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVA
AALAVRESDRTEFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHVAGSRSLLLDGHELPRSIPAL
>Mature_550_residues
TTAISTTATDLDVALGDPFCPANPHGATAILAADERAERALATYQLLADLGLQRMFVPIELGGDLVDIPSLVRVLAPVFG
RDMGLGLGFGVTTLMAALNVWHSGDDRQRRRVADQVLTGAPLSVAYHELDHGNDMAANEVRAVATAGGYRLSGRKEVINN
ASRASAAVVFARTSDRPGRSHSLFLADLDNVRRLDRFRTTALRTAQLGGLDFHDHQVGVEDRIGAEGHGIEIALKSFQIS
RVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHARTNLAIAQSLLLAVEAAVTTAAVGLHTSPQHAGAQAASVKY
AAPLLLEYAMEHLAVVLGARFYLRTGPFALFGKHYRDLAPVGIGHAGSTSCLLALLPQVRHLLQPGTAAALPAPGAQLPR
LDFSELVLRSGAPDPIVSWTPAATPLTAPGAGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVAA
ALAVRESDRTEFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHVAGSRSLLLDGHELPRSIPAL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=327, Percent_Identity=27.217125382263, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI226958414, Length=330, Percent_Identity=20, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI226958412, Length=336, Percent_Identity=20.5357142857143, Blast_Score=73, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=314, Percent_Identity=22.2929936305732, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=278, Percent_Identity=23.7410071942446, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21356377, Length=320, Percent_Identity=25.625, Blast_Score=76, Evalue=7e-14,
Organism=Drosophila melanogaster, GI281363737, Length=312, Percent_Identity=23.7179487179487, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646207, Length=246, Percent_Identity=26.4227642276423, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 58347; Mature: 58216

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAISTTATDLDVALGDPFCPANPHGATAILAADERAERALATYQLLADLGLQRMFVPI
CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHEEEEE
ELGGDLVDIPSLVRVLAPVFGRDMGLGLGFGVTTLMAALNVWHSGDDRQRRRVADQVLTG
ECCCCEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
APLSVAYHELDHGNDMAANEVRAVATAGGYRLSGRKEVINNASRASAAVVFARTSDRPGR
CCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCHHHHHCCCHHCCEEEEEEECCCCCCC
SHSLFLADLDNVRRLDRFRTTALRTAQLGGLDFHDHQVGVEDRIGAEGHGIEIALKSFQI
CCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHH
SRVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHARTNLAIAQSLLLAVEAAVTT
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAVGLHTSPQHAGAQAASVKYAAPLLLEYAMEHLAVVLGARFYLRTGPFALFGKHYRDLA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCC
PVGIGHAGSTSCLLALLPQVRHLLQPGTAAALPAPGAQLPRLDFSELVLRSGAPDPIVSW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEC
TPAATPLTAPGAGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHH
AALAVRESDRTEFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHVAGSRSLLLD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCEEEEC
GHELPRSIPAL
CHHCCCCCCCC
>Mature Secondary Structure 
TTAISTTATDLDVALGDPFCPANPHGATAILAADERAERALATYQLLADLGLQRMFVPI
CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHEEEEE
ELGGDLVDIPSLVRVLAPVFGRDMGLGLGFGVTTLMAALNVWHSGDDRQRRRVADQVLTG
ECCCCEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
APLSVAYHELDHGNDMAANEVRAVATAGGYRLSGRKEVINNASRASAAVVFARTSDRPGR
CCHHHHHHHHCCCCCCHHHHHHHHHCCCCEEECCHHHHHCCCHHCCEEEEEEECCCCCCC
SHSLFLADLDNVRRLDRFRTTALRTAQLGGLDFHDHQVGVEDRIGAEGHGIEIALKSFQI
CCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHH
SRVVMAGAGLGPVDVALHLAASFARQRVVYGRRVDQIPHARTNLAIAQSLLLAVEAAVTT
HHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAVGLHTSPQHAGAQAASVKYAAPLLLEYAMEHLAVVLGARFYLRTGPFALFGKHYRDLA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCC
PVGIGHAGSTSCLLALLPQVRHLLQPGTAAALPAPGAQLPRLDFSELVLRSGAPDPIVSW
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEC
TPAATPLTAPGAGDLIEEQARTLERLRGAAERIPASALGVTAPPAAFDLAEQFTKRFVVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHH
AALAVRESDRTEFADAWVRIAIAAVAAHRRGRAVVDPADVDVVVQRIDRHVAGSRSLLLD
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCEEEEC
GHELPRSIPAL
CHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]