| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is mmr [H]
Identifier: 169630636
GI number: 169630636
Start: 3600497
End: 3601900
Strand: Direct
Name: mmr [H]
Synonym: MAB_3555
Alternate gene names: 169630636
Gene position: 3600497-3601900 (Clockwise)
Preceding gene: 169630635
Following gene: 169630637
Centisome position: 71.06
GC content: 62.96
Gene sequence:
>1404_bases GTGACAGAACAGCTTCGCGCGCAACCCTTGTCGATGATGGGCGTGGTGGGAGCCAGCATCGGAAATTTCCTCGTCGCCTT CGACGCATCTGCGATCAATGTCGCGCTGCCGACCGCGACCGAGGAACTTCACGCGACAGTCGACGTTGGCCAATGGTTTC TCGACGGCTACACCATTCCGCTCTGCGTGTTTCTGCTCGTTTCCGGCGCGATCGGGGATCGCTATGGCGCCGTCAAGGTG TATCGCTGGTCAATGCTCGCATTCCTGGCCGCTTCGGTGGCTTGCGCGGCCGCCGACACCGCAGGGACCCTGATCGTCGC GCGCATCGCGCAGGGGGTAGGCGCAAGCTTCGTGGTACCGATGACGCTTGCGATCCTGACCAAGGGGATACCCGATCCCC GCCGGCGCTCGACAATGATCGGAGCGTGGGGCGTCGTCGGGGGTATCGGAATCGCCTCCGCACCCTTGCTGAGCGGACTG ATTACCGAATACGCCGGCTGGCGTTGGCTCTTCCTGATCAACGTTCCCATTTGTGCGTTCGCGCTGCGGGCGACGCGGAC CATCGCCAACATTCCCGCAGACCAACCCCGCCGATTCAATCCGATTTCCCAACTCTTGTTGTGCGTATTTCTTACCTGTA TTGCGAGTGTGCTCATCGAGGGCAGACGCCTTGGCTGGTCGAGTGTGTCAACTCTCGCCATGGCCGGCATCGCGGTGCTG TCCATGGCTGCCCTCTGGCAGGTCGAACGGCGGTCCGCCGAGCCGACGATCCCGCCGGCGCTGGCCCGCAATCGCTCATA TCTGCTGATCGTCTGCGCAGGCAGCTTCTACCAGTTCGCCTCCTATGGCTCACTGCTGGTGCTCGCGCTCTTTCTGCAGG TACGCCATGGTCTCCGCGCCGATCACGCCGGATATATCATGTCCATCTGCTGCGTCGCTTGGCTCCTCGGCAATGTGCTT GCCGTGAAGGTGACGCCGGACAACCGTCGACAGGCGATCTTGGCGATGGCCGCGGTGGGTTGCGTCGGCGCCGTCGGCAC GGCAGCACTGTCCCTCACCGAGAAGATCGTTCCCGCCATGGTGCCGACATCGTTGATCGGCGTGGCATCCGGCGTGCTCG CCTCATCGCTGAGCGCTGCCGCGATGCATGTCAGTCCGCATACCGTCTCCGGGGTGGGGTCCGCGGTACTCAACACCAGC CGGCAGAGCGGGATGGTTATCGCGATCGCGCTGCTGGGCGGTTTGTCGTTCGATCATCAACTGCTGGTGCCCATGCTCCT CGTTGCATCGGCGTTCGCCATGGTGCTCGTGACGACCGCCCTCGCCTTTCGCCCAAACCTGTTCAAACAGAGTTCGGCCC AACGCCTTCAATCTTCAGCCTGCCAATTCCCGTCGCGTGGATAG
Upstream 100 bases:
>100_bases ATGGTCGTGCCGTCGGAGTGACGACGCCCATCCATTGGTGTATCTACGCCTCCCAGTTGCCGGCAGAAATCGCTGCGCGC AAACCCACGGAACACGCACC
Downstream 100 bases:
>100_bases CATTTGGATATGGGTAACACTCTGACCGTTCAGACGGCGCTCCTGGACGTAGAAGTACGGCGACACGGCAACCCGGAGAA CACGGACAAGCTGCCGGTTG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: MMR peptide [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTEQLRAQPLSMMGVVGASIGNFLVAFDASAINVALPTATEELHATVDVGQWFLDGYTIPLCVFLLVSGAIGDRYGAVKV YRWSMLAFLAASVACAAADTAGTLIVARIAQGVGASFVVPMTLAILTKGIPDPRRRSTMIGAWGVVGGIGIASAPLLSGL ITEYAGWRWLFLINVPICAFALRATRTIANIPADQPRRFNPISQLLLCVFLTCIASVLIEGRRLGWSSVSTLAMAGIAVL SMAALWQVERRSAEPTIPPALARNRSYLLIVCAGSFYQFASYGSLLVLALFLQVRHGLRADHAGYIMSICCVAWLLGNVL AVKVTPDNRRQAILAMAAVGCVGAVGTAALSLTEKIVPAMVPTSLIGVASGVLASSLSAAAMHVSPHTVSGVGSAVLNTS RQSGMVIAIALLGGLSFDHQLLVPMLLVASAFAMVLVTTALAFRPNLFKQSSAQRLQSSACQFPSRG
Sequences:
>Translated_467_residues MTEQLRAQPLSMMGVVGASIGNFLVAFDASAINVALPTATEELHATVDVGQWFLDGYTIPLCVFLLVSGAIGDRYGAVKV YRWSMLAFLAASVACAAADTAGTLIVARIAQGVGASFVVPMTLAILTKGIPDPRRRSTMIGAWGVVGGIGIASAPLLSGL ITEYAGWRWLFLINVPICAFALRATRTIANIPADQPRRFNPISQLLLCVFLTCIASVLIEGRRLGWSSVSTLAMAGIAVL SMAALWQVERRSAEPTIPPALARNRSYLLIVCAGSFYQFASYGSLLVLALFLQVRHGLRADHAGYIMSICCVAWLLGNVL AVKVTPDNRRQAILAMAAVGCVGAVGTAALSLTEKIVPAMVPTSLIGVASGVLASSLSAAAMHVSPHTVSGVGSAVLNTS RQSGMVIAIALLGGLSFDHQLLVPMLLVASAFAMVLVTTALAFRPNLFKQSSAQRLQSSACQFPSRG >Mature_466_residues TEQLRAQPLSMMGVVGASIGNFLVAFDASAINVALPTATEELHATVDVGQWFLDGYTIPLCVFLLVSGAIGDRYGAVKVY RWSMLAFLAASVACAAADTAGTLIVARIAQGVGASFVVPMTLAILTKGIPDPRRRSTMIGAWGVVGGIGIASAPLLSGLI TEYAGWRWLFLINVPICAFALRATRTIANIPADQPRRFNPISQLLLCVFLTCIASVLIEGRRLGWSSVSTLAMAGIAVLS MAALWQVERRSAEPTIPPALARNRSYLLIVCAGSFYQFASYGSLLVLALFLQVRHGLRADHAGYIMSICCVAWLLGNVLA VKVTPDNRRQAILAMAAVGCVGAVGTAALSLTEKIVPAMVPTSLIGVASGVLASSLSAAAMHVSPHTVSGVGSAVLNTSR QSGMVIAIALLGGLSFDHQLLVPMLLVASAFAMVLVTTALAFRPNLFKQSSAQRLQSSACQFPSRG
Specific function: Resistance to the epoxide antibiotic methylenomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=292, Percent_Identity=26.7123287671233, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1788710, Length=301, Percent_Identity=26.578073089701, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1790195, Length=408, Percent_Identity=25, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87081983, Length=403, Percent_Identity=25.5583126550869, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788392, Length=290, Percent_Identity=27.9310344827586, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6325455, Length=141, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48972; Mature: 48841
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQLRAQPLSMMGVVGASIGNFLVAFDASAINVALPTATEELHATVDVGQWFLDGYTIP CCCCHHHCCHHHHHHHHHHHHCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHH LCVFLLVSGAIGDRYGAVKVYRWSMLAFLAASVACAAADTAGTLIVARIAQGVGASFVVP HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH MTLAILTKGIPDPRRRSTMIGAWGVVGGIGIASAPLLSGLITEYAGWRWLFLINVPICAF HHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH ALRATRTIANIPADQPRRFNPISQLLLCVFLTCIASVLIEGRRLGWSSVSTLAMAGIAVL HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SMAALWQVERRSAEPTIPPALARNRSYLLIVCAGSFYQFASYGSLLVLALFLQVRHGLRA HHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC DHAGYIMSICCVAWLLGNVLAVKVTPDNRRQAILAMAAVGCVGAVGTAALSLTEKIVPAM CCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPTSLIGVASGVLASSLSAAAMHVSPHTVSGVGSAVLNTSRQSGMVIAIALLGGLSFDHQ HHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCHH LLVPMLLVASAFAMVLVTTALAFRPNLFKQSSAQRLQSSACQFPSRG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEQLRAQPLSMMGVVGASIGNFLVAFDASAINVALPTATEELHATVDVGQWFLDGYTIP CCCHHHCCHHHHHHHHHHHHCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHCCCHHH LCVFLLVSGAIGDRYGAVKVYRWSMLAFLAASVACAAADTAGTLIVARIAQGVGASFVVP HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH MTLAILTKGIPDPRRRSTMIGAWGVVGGIGIASAPLLSGLITEYAGWRWLFLINVPICAF HHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH ALRATRTIANIPADQPRRFNPISQLLLCVFLTCIASVLIEGRRLGWSSVSTLAMAGIAVL HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH SMAALWQVERRSAEPTIPPALARNRSYLLIVCAGSFYQFASYGSLLVLALFLQVRHGLRA HHHHHHHHHHHCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC DHAGYIMSICCVAWLLGNVLAVKVTPDNRRQAILAMAAVGCVGAVGTAALSLTEKIVPAM CCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPTSLIGVASGVLASSLSAAAMHVSPHTVSGVGSAVLNTSRQSGMVIAIALLGGLSFDHQ HHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCHH LLVPMLLVASAFAMVLVTTALAFRPNLFKQSSAQRLQSSACQFPSRG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379177; 9384377 [H]