| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630607
Identifier: 169630607
GI number: 169630607
Start: 3573490
End: 3574500
Strand: Reverse
Name: 169630607
Synonym: MAB_3526c
Alternate gene names: NA
Gene position: 3574500-3573490 (Counterclockwise)
Preceding gene: 169630609
Following gene: 169630606
Centisome position: 70.54
GC content: 65.18
Gene sequence:
>1011_bases ATGAGTCGACTCCCGGTACAGGAGTCCTCCGAACGCTACGAGCCGCTGCGTGCCCAGCGCGATCCGCTGGCCGAGGGAAG CGGCCGCATCCGCTCCGATAGGCGTGACCGCGACCGCTGGCGCAAGCAGACCTGGCTCGGGCGCTTCATCTCCACATATG GATGGCGTGCGTATGCGATCCCGCTGCTGGTGGCGCTGACCGTCTTTGTCGGCTACCAGACCGTCACGCAGCGTGAACAC GTGCATGGGGGTGCCGACGGGCCCAACGAGCCCGTGGCCGATCCGCCATCGATCGGGGCGCTGGGCGACGCCATCATCGG TGCGCCGCCCAAGGGGCTTACCCAGTTCGACGCGAGTCTGCCCGACGGGGTGCTGCCCGAAGGCGAGCCCTTCACCGCCC AGGGTGCCCGGACCTGGCACATAGTGCCGGGCACCACGCCCCAGGTCGGGCAGGGCGCCGCAAAGGTCTTCTCCTACACC ATCGAGGTCGAGGACGGCATCGACACAATGGGTTTCGGAGGCGACGAGGCGTTCGCGCGGATGGCGACCCAGACCCTGGC CAGCCAGAAGAGCTGGACGCACAACCCTCAATTCGCGTTTGTCCGGATCGATGCCGGTACACCCGATTTTCGGATCTCGC TGACCTCGCCAGACACCGTCCGGGAGGGCTGCGGATACGAGATCCAACTCGAATCCTCTTGCTACAACCCGAGGTACGGC GAGAATGGCGAGCAGCGCGTGTTCATCAACGAGGCACGCTGGGTGCGCGGCGCGGTCCCGTTCCAGGGCGATATCACCTC CTATCGCCAATACGTCATCAACCACGAAGTCGGACATGCGATCGGGTATCGAAGCCATGAACCCTGCGAGCAGGACCAGC AGCTGGCGCCGGTGATGATGCAGCAGACGTTCAGCACCAGCAATGATGTCGCCGCGAAGTTCGATCCCGACTCGATCAAG CCCGACGGCAAGACATGCCGCACCAACCCCTGGCCGTACCCGATTCCGTAG
Upstream 100 bases:
>100_bases CCATTCTTGCTCGGTGACCTACGACCGGCACCAATGGGCGCATAATCGTAGGTCCATGCCAGAAACTATGGATGATTCCC TTCGCGCAAGCGGCTCGTCG
Downstream 100 bases:
>100_bases CGGTCACTGGTCTGGCTCCGGGAAGGGTTGGCATCCCGATACTGTTGATGCTGCTGTAGCCCTCAACCATCAGGAGTCAC GGTGCCCACATTGCCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSRLPVQESSERYEPLRAQRDPLAEGSGRIRSDRRDRDRWRKQTWLGRFISTYGWRAYAIPLLVALTVFVGYQTVTQREH VHGGADGPNEPVADPPSIGALGDAIIGAPPKGLTQFDASLPDGVLPEGEPFTAQGARTWHIVPGTTPQVGQGAAKVFSYT IEVEDGIDTMGFGGDEAFARMATQTLASQKSWTHNPQFAFVRIDAGTPDFRISLTSPDTVREGCGYEIQLESSCYNPRYG ENGEQRVFINEARWVRGAVPFQGDITSYRQYVINHEVGHAIGYRSHEPCEQDQQLAPVMMQQTFSTSNDVAAKFDPDSIK PDGKTCRTNPWPYPIP
Sequences:
>Translated_336_residues MSRLPVQESSERYEPLRAQRDPLAEGSGRIRSDRRDRDRWRKQTWLGRFISTYGWRAYAIPLLVALTVFVGYQTVTQREH VHGGADGPNEPVADPPSIGALGDAIIGAPPKGLTQFDASLPDGVLPEGEPFTAQGARTWHIVPGTTPQVGQGAAKVFSYT IEVEDGIDTMGFGGDEAFARMATQTLASQKSWTHNPQFAFVRIDAGTPDFRISLTSPDTVREGCGYEIQLESSCYNPRYG ENGEQRVFINEARWVRGAVPFQGDITSYRQYVINHEVGHAIGYRSHEPCEQDQQLAPVMMQQTFSTSNDVAAKFDPDSIK PDGKTCRTNPWPYPIP >Mature_335_residues SRLPVQESSERYEPLRAQRDPLAEGSGRIRSDRRDRDRWRKQTWLGRFISTYGWRAYAIPLLVALTVFVGYQTVTQREHV HGGADGPNEPVADPPSIGALGDAIIGAPPKGLTQFDASLPDGVLPEGEPFTAQGARTWHIVPGTTPQVGQGAAKVFSYTI EVEDGIDTMGFGGDEAFARMATQTLASQKSWTHNPQFAFVRIDAGTPDFRISLTSPDTVREGCGYEIQLESSCYNPRYGE NGEQRVFINEARWVRGAVPFQGDITSYRQYVINHEVGHAIGYRSHEPCEQDQQLAPVMMQQTFSTSNDVAAKFDPDSIKP DGKTCRTNPWPYPIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37277; Mature: 37146
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPVQESSERYEPLRAQRDPLAEGSGRIRSDRRDRDRWRKQTWLGRFISTYGWRAYAI CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH PLLVALTVFVGYQTVTQREHVHGGADGPNEPVADPPSIGALGDAIIGAPPKGLTQFDASL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCC PDGVLPEGEPFTAQGARTWHIVPGTTPQVGQGAAKVFSYTIEVEDGIDTMGFGGDEAFAR CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHH MATQTLASQKSWTHNPQFAFVRIDAGTPDFRISLTSPDTVREGCGYEIQLESSCYNPRYG HHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHCCCEEEEECCCCCCCCCC ENGEQRVFINEARWVRGAVPFQGDITSYRQYVINHEVGHAIGYRSHEPCEQDQQLAPVMM CCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH QQTFSTSNDVAAKFDPDSIKPDGKTCRTNPWPYPIP HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLPVQESSERYEPLRAQRDPLAEGSGRIRSDRRDRDRWRKQTWLGRFISTYGWRAYAI CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH PLLVALTVFVGYQTVTQREHVHGGADGPNEPVADPPSIGALGDAIIGAPPKGLTQFDASL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCC PDGVLPEGEPFTAQGARTWHIVPGTTPQVGQGAAKVFSYTIEVEDGIDTMGFGGDEAFAR CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHH MATQTLASQKSWTHNPQFAFVRIDAGTPDFRISLTSPDTVREGCGYEIQLESSCYNPRYG HHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHCCCEEEEECCCCCCCCCC ENGEQRVFINEARWVRGAVPFQGDITSYRQYVINHEVGHAIGYRSHEPCEQDQQLAPVMM CCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH QQTFSTSNDVAAKFDPDSIKPDGKTCRTNPWPYPIP HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA